Styela clava (leathery sea squirt): 120343182
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Entry
120343182 CDS
T07291
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120343182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120343182
03110 Chaperones and folding catalysts [BR:
sclv03110
]
120343182
04121 Ubiquitin system [BR:
sclv04121
]
120343182
Enzymes [BR:
sclv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120343182
Spliceosome [BR:
sclv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120343182
Complex C
U4/U6.U5 tri-SnRNP related factors
120343182
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
120343182
Chaperones and folding catalysts [BR:
sclv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120343182
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
U-box type E3
120343182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
DUF2111
Coq4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120343182
NCBI-ProteinID:
XP_039268246
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MGKRQHQSDKMYITGKEWSAFYGGHRKKIENADFRRLPFFCCSLSMQPFDTPMCTKDGHI
FDLLSIIPWLKKYGTNPITGKKMDAKSLVKLNFHKNADGKYHCPVLFKVFNENTHIVAVS
KTGNVYSYDAIEQLNIKPKNWRDLLTDEIFARSDLITIQDPTNLDKFNLQSFHHLKHNLR
LPEADANFRSKPGYFLNSTNAELEQTMDELNKSYKGDEILKEKPVAKKSKVDKFNAAHYS
TGTVSASFTSTAAVPQLETETAVLDDDVVRYGFVKTKGYVRLQTNFGNLNVELHCDQTPK
TCENFMKLCQKDYYNGTIFHRSIRNFMIQGGDPTGTGTGGESFWGGTFKDEFRQQLTHTG
RGVVSMANSGKDTNKSQFFITFRSCEHLNRKHTVFGRVVGGLDTLQKMENVETEKKTDKP
KQEIKLLQAVVFIDPYADADEKLAKLREDEEKRVQAELEEKVAEKKPKPMKVYKNGVGKY
IKKPSNQDDKSNTNASAQKKKLLPASGVQFKNFSSW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaggcaacatcaatcagataagatgtatataacaggcaaggaatggtctgca
ttttatggtggtcatcggaagaaaatagaaaatgcagattttcgcagactcccattcttt
tgctgcagtttgtctatgcaaccattcgatactccaatgtgtaccaaagatggtcatatt
ttcgatcttttgagcatcatcccttggctaaagaaatatgggacaaatccaatcacaggg
aagaaaatggacgcaaaatctcttgtgaaacttaattttcataaaaatgcggatggaaaa
tatcactgcccagttttgtttaaggttttcaacgaaaacactcacattgtggctgtttca
aagactggaaacgtttattcttatgatgcaattgaacaactgaacatcaaacctaaaaat
tggagagatttgctcacagatgaaatatttgcgagaagtgatttgataacaatacaggat
ccaacaaacttggacaaatttaacctacaatcatttcatcatctcaaacacaatttgaga
cttccagaagcagatgctaattttcgatcaaagcctggatattttctaaacagcacaaat
gcagaactagagcaaactatggatgaattgaataaatcttataagggagacgaaatatta
aaagaaaaacctgttgcgaaaaaatctaaagtggataaatttaatgctgctcattattca
actggaactgtttctgcttcatttacatctacagctgcagttccacaacttgaaactgaa
accgcagtgttggatgatgatgtggttcgttacggatttgtaaaaacaaaaggatatgtg
agattacaaacaaacttcggtaacctgaatgttgaactacactgcgatcagactcctaaa
acttgcgagaatttcatgaagctatgtcaaaaggattattataacggaacaatatttcat
cgatcaataaggaatttcatgattcaagggggcgatccaactggcactggaacaggtggt
gaatcgttttggggaggaacgtttaaggatgaatttcgccaacaactcacacatactggt
cgtggagtagttagtatggcaaactctggaaaagatactaataaatctcaattttttatc
acgtttcgatcatgcgaacatttaaatcgaaagcacacagtatttggtcgagttgttggt
ggacttgatacactacagaaaatggagaacgttgagactgaaaaaaagacggacaaacct
aaacaagaaataaaactcttgcaagctgttgtatttattgatccttacgcagatgcagat
gaaaaactcgcaaagttgagagaagacgaagaaaagagagttcaagccgaattggaagaa
aaggtagcggagaaaaaacccaaaccaatgaaagtgtacaaaaatggagttggaaaatat
attaaaaagccttccaatcaagatgacaaatcaaataccaatgcgagtgcacaaaagaag
aaattattgcctgcttctggtgtccaattcaaaaatttcagcagttggtga
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