Styela clava (leathery sea squirt): 120343183
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Entry
120343183 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120343183 isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120343183
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120343183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
LIF-R_Ig-like
Plant_all_beta
Motif
Other DBs
NCBI-GeneID:
120343183
NCBI-ProteinID:
XP_039268247
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MKYFEKMCEYPSFVFPTHTRGYSKHNQQAFTDYGCWESVDIDVDENESQVIVRKHRSQHT
SDSTLETPLSKTIDSRVLTPTHDFFTLGKPAYFPKLIEDDITFAKLFKERVIFEQGRKRS
HKDYRKDSSHILTIPVEKYINNLIEDHPDITGQCFDEIIQPIINSLPSRKKKKRFRRHMY
LKHIDPSLCDVGTKLLRDIVRKESQTEILKRYCDRDYSGGCLSYSHIGKRNGKQYGIIVC
PQGQCLDELCIKSLTIDMKNGLENDVDSQGSSVCNNQGQNLFPKLLLGSENRQSLNGRIL
QIDVTCPETADNFLICARSDYHVLLNKFDSHQLEWNDEEDRASFSNDTVPLSSLGLLKTS
GSSHISSIALSPFIPGECVVATADRCVRMWTPDADKSPNMASQGSIHNLEILLNGTMGGL
RSSNTWRQVCFAAHPRQIYITDDENVCLFDIRTQNSYRSLFNVHTSKHAKEHEKIYAIES
CRRIENNYECLIATNYNLYLFDQRHCGQPLMQWGTNMTFPPQYVKISKVCQSSIVDEVYP
DIAWSQSTSAILVGNQNAHEVYCYQMCKSRKTTSKAAKIYPPQAIGPPRILGSFKNIKNY
LDRNLYEHGAYLKNRASKMTVGLDAVSLEGPGNGIIVFQMNAVGDIGYQTLAMKNHQDVY
DLSNVITGKTSATFTSFEEEHNKELLCNMKKKNYDDWIHEVTCTGTDQHRKNTVMKKHFL
PHKEARIEKRFFSNVLFKSSFIVDTDSLSMCPLCTTHVSSVNSSTEPDDSSTSTFCLSCC
TSIKGSNAILELLRNPEHTVLTRSLVGKIEIEDNDISSESDSETVNIRNLNLLNIQHTGD
DIDNEVGRILKATWKGTYQDYWESLKQLEMQRQQEEQNEQDRQTFDLSQRSITEDQEENN
TTVENVSNNANAGFLSILSKKTKPTEPRVSPKRKKRKKDISSDDHSFLSTFMSSPVHVSH
RSLTATVNSDLISFQNQPSMGTTLPLPDISVLTNPTFQTGSSGGVLTSANDSAAGKSLEN
SPFSFFSPRRGNLTPQHYNVYSPSKHKGNESQLRSPRVRTKDGSPTKHTRKKAPISQAIG
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattttgaaaaaatgtgtgaatatcctagttttgtatttccaactcacactcgt
ggttacagtaaacacaatcaacaagcatttacagattatggatgctgggaatctgtggac
attgatgttgatgagaatgaatctcaagtcattgtccgaaagcatcggtcacagcataca
tctgacagtactttggaaacaccattgagcaagacaattgattccagagttctaacacca
acacatgattttttcacattgggaaaacctgcctattttcccaaacttattgaagatgat
attacctttgctaaattgttcaaagagagagtcatatttgaacaaggaagaaagcgatct
cataaagattacagaaaagacagctctcatatactgacaatacctgttgaaaaatacata
aacaatttaatcgaggatcatccagatataactggtcaatgttttgatgaaattattcaa
ccgatcattaacagtttgccgtccaggaagaaaaaaaaacgttttcgaagacatatgtat
ttgaaacacatcgatccttcactgtgtgatgttgggacaaaattacttcgagatattgtt
agaaaagaatctcaaactgagattttgaaaagatattgtgatcgagattattctggaggc
tgcttgtcgtacagtcatattggaaaaagaaatgggaaacagtatggaattattgtctgt
ccacaaggtcaatgtcttgatgagctatgcattaaaagtttaacaattgatatgaagaat
gggctagaaaatgacgtagactcacaaggctcatctgtttgcaataatcaaggacagaat
ttgtttcccaaactacttcttggatctgaaaaccgtcagtcgttgaatggaagaattctt
cagatcgatgttacttgtcctgaaacagccgacaattttcttatctgtgcaagatccgat
tatcatgttttattaaacaagtttgacagccatcagttggaatggaatgatgaagaagac
agggcttctttttcaaatgacacagttccactttcttcacttggtttgctaaaaacatca
ggatccagtcacatatcgagcatagcattaagtccattcattccaggagaatgtgttgta
gccactgcagatagatgtgtgagaatgtggactcctgatgccgataaaagtcctaatatg
gcctcacagggttcaattcacaatcttgaaatactgttgaatggtacaatgggaggattg
agatcttcaaatacatggagacaagtttgctttgctgctcacccgagacaaatatatata
actgatgatgaaaatgtgtgtttgtttgatattaggacgcagaacagttatagaagttta
ttcaatgttcacacatctaaacacgcaaaagaacatgaaaagatttatgctatcgagagc
tgcaggaggattgaaaataactacgaatgtctcatcgcaactaattataatttatacctg
tttgaccaacgacattgcggtcagccattgatgcagtggggaacgaacatgacatttcca
cctcaatatgttaagatttctaaagtttgtcaatcgagtatcgtggatgaagtatatcct
gatattgcatggtcacaatctacatctgctattttggttgggaaccaaaatgcacatgaa
gtatattgctatcaaatgtgtaaatcaagaaaaacaacatcaaaagccgctaaaatatat
ccaccacaagctattggcccgccaagaatacttggaagtttcaaaaatataaaaaattat
ctagaccgcaatttgtatgagcatggagcatatttgaaaaacagagcttcgaaaatgact
gttggcttagatgctgtatccttggaaggacctgggaatggtataattgtctttcaaatg
aatgcagttggtgatattggatatcaaactcttgccatgaaaaatcatcaagatgtttat
gatttgtctaacgttatcactggaaaaacttcagcaacttttacaagctttgaagaagaa
cacaacaaagagcttttatgcaatatgaagaagaaaaattacgatgattggatacatgaa
gtaacatgcactggcactgatcaacatagaaaaaatacagtaatgaaaaaacactttcta
cctcacaaggaagcaagaatagagaaaagatttttttccaatgttttgttcaaatcatca
ttcatagtcgatactgattctttatctatgtgtcctttatgcaccacacatgtatcttcc
gtaaattcatcaactgaaccagatgattcaagcacaagtacattctgtctttcatgttgc
acgagtataaaagggagcaatgcaatactagaattactcaggaatcctgaacatactgtg
cttactcgttcattagttgggaagattgaaatagaggataatgatatatcgagtgaatca
gattctgagactgttaatattaggaacttgaatttgctcaatattcaacatactggtgat
gatattgataatgaagtgggaagaatattaaaagcaacatggaaaggaacttatcaggat
tattgggaatctttgaagcaattagaaatgcaaagacagcaggaagagcaaaacgaacag
gatcgtcaaacatttgatctcagtcaaaggtcaatcacagaagatcaggaagaaaacaac
acaacagtggaaaatgtatcaaataatgcaaatgcaggatttttgagcattttatcaaaa
aaaacaaaaccaacagaaccaagggtatcaccaaaacgtaaaaaacgcaagaaagacatt
tctagtgacgatcacagttttttatcaacttttatgtcaagccctgtacatgtttcccat
agaagtcttactgcaacagttaattcagacttgatcagttttcaaaatcaaccttccatg
gggacaacattacctttgcctgatatatcagtgctgacaaacccaacatttcaaactggg
tcaagtggaggtgtgctaacatctgctaatgatagtgcagcaggtaaaagtttagaaaat
tctccgttttcatttttttctcctcgaagaggaaatttgactccacagcattataacgtt
tattcaccttcaaaacataaaggcaatgaatcacaattgcgatcacctagagttagaacg
aaagatggttcgcccacaaaacatactagaaagaaagcgccaatatcacaagctattggt
ttttaa
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integrated database retrieval system
