Styela clava (leathery sea squirt): 120343201
Help
Entry
120343201 CDS
T07291
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120343201
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120343201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
DUF7102
Motif
Other DBs
NCBI-GeneID:
120343201
NCBI-ProteinID:
XP_039268272
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MVRCRYLAIDYESDFAQKRRGLRNRLTITNISSPTEDIRRRKDIFSHRTPWIGVSKETES
SSSRNELKLLLSRCESLNATDIEFEPLMQGKTSYDVSELKAFTESDKDANATDSKLFEEI
EGLESIKVSQPSISRLLRKHSNLVLSDPYAEIANVYKKYEKLDISKIQKFNLDDDPTFEI
MEATSSKCSLDFDEKLNYEVDNDFLDEIKETHEGQKPDIDNTDLEKIKVVESSSVKGDFG
SYVSMTTKHFENDEVLSTLPKSINSDEIKILQVDQVLERSSLELEVPSNSDPVYKIDLIR
EALENFDMKKINLIKISHEDFHRITKCTDIENIFVNGMEREDWNTARVSHLLLSETALKE
ANLPEIDATESTKCSDLCRPQSRLSTSDIELALHWSFTTHVKGLITKLQRLEKLNVEILQ
RRPTEFNNRNSYCTDAEVFEELVPVIEENTGKRKICEIQESASYENDEFSLDSFLQMRGK
MMKPKIQKFMRAVGSKKDMQVAVETIHDSKDFSSLNSVSSTSIPTIPSFPPVEDSNYRLV
KVNITGGILRIILDIESYIEPIFNQLKTFRVIPEQCDIRNINEDMSKYLLKQSKRFVQNS
SGMVQHPQYVLLVMLHCFIVCKSRLVNLSPASGLGFLIDFYQNNKEMLESLIHLNEFNDF
KSMLSLIPLAIHTLKQSIMESHLIHPKIAELGKIIYERLYKDSRRDGSITKILILCDTKC
QHLFDEIIHTLIKNCSSKIGVNPIALPSGQQSYTVDDFVKNAIASGYNIVIIPVAALSSS
FPWDKFTLLLEYEAKKDSPWKRISMGLGIRHIALEIERTESQLDMDGDTANNDDCDIITL
IGSSTITQCGNLLHLLETRHNIEILERDYVELNKSISPNENSITGHPDIIIDQTTCIIVE
TFSALSGEDGSQLLHNIILKILDLKTRFTKRYVIIADLSAKKSGYPMRGDFPLNLSKLHT
ALENFLQQDSVFEMKLFCCFDVEHFAYLIQRLVENSKSDKSMSKEPRMKRLTMSQSSHEK
FLVQFPSINSLVAQNMLSIASLKEIASMSISELLERFSHISKECLQDFYSKLHAPGQPLP
AFYDEIDVDVTPEFSFKLEQSDSMAMGKSQDEFPDFAAYFGREYQSKDGSDCSSSHFSES
SCFQQSNPFASNFDSLSCSSKNESNPCRKRLRFERIKEWKDGQTRLAYY
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgctgtcgatatttggcgatcgattatgaatcagatttcgctcagaaacgaagg
ggtttgcgtaatagactgaccattacaaatatcagttctccaacagaggatattcggaga
cgaaaagatatatttagccacagaacgccatggattggtgtatcaaaggaaacagaatca
agttcttcaagaaatgaacttaaattattactaagtcgttgtgaatcactgaatgctact
gatatcgaattcgaacctctcatgcagggtaaaacaagttatgatgtttctgaactcaag
gcattcacagaatctgataaagatgcaaacgcaacagattctaaactctttgaagagatt
gaaggacttgaatctattaaagtttcgcaaccatctatttcgcgattgttgagaaagcat
agcaatttggtgttatctgatccgtatgcggaaatcgctaatgtttacaagaaatatgaa
aaattagatatcagtaaaattcaaaaatttaatctggatgacgatccaacttttgaaatc
atggaggcaacaagctcaaaatgttcactggattttgacgaaaaattgaattatgaagta
gacaatgattttcttgatgaaatcaaagaaacacatgagggacaaaaaccagatattgac
aacaccgatctagaaaaaattaaagttgtcgaatcatcttctgttaaaggagactttgga
tcatatgtatcaatgacaacaaaacattttgaaaatgatgaagttttaagcaccttgcca
aaatctataaatagtgatgaaataaaaatattgcaagttgatcaagtactggaaagatca
tccttggaactagaggtaccttctaattctgacccggtgtacaagattgaccttattaga
gaagcattagaaaattttgatatgaagaaaatcaaccttataaagatatcacatgaagat
tttcacagaataacaaaatgcaccgatattgaaaatatatttgtaaatggaatggagaga
gaagattggaatactgctcgtgtttcacatctcttattatcagagacagcactaaaagaa
gcaaatttgccagaaatagatgctacggaatcaacaaaatgttcagatctctgccgacct
cagtcaagactttctactagtgatattgagttggcattacattggagcttcactacacat
gttaaaggcttgataaccaaattgcaaagactggaaaaacttaatgttgagatattgcaa
cgaagacctacggaatttaataacagaaattcatattgtactgatgctgaagtttttgag
gaacttgttccagtgattgaggaaaatacaggtaaaagaaaaatttgtgaaatacaggaa
agtgcttcatatgaaaatgatgaattttctttggattctttcttacaaatgcgtggaaaa
atgatgaaacctaaaatacagaaattcatgagagctgtgggtagtaaaaaggatatgcag
gttgcagtagaaaccatacatgatagtaaggacttttcttcactaaatagtgtttcatct
acttcaataccaacaataccatcctttccacctgttgaagattcaaactacagattggtc
aaagtaaatatcactggtggtattttacgaataattttggatatagaaagttatattgag
cctatattcaatcaattgaaaacgtttcgagttatacctgaacagtgtgatatacgaaat
attaatgaagacatgtcaaaataccttttgaaacaatcaaaaagatttgtccagaatagc
tctggtatggtacaacatcctcaatatgtgttgctggtgatgttacattgtttcattgta
tgtaaatcaagactagtaaacctatctcctgcatctggacttggttttttgatcgacttt
tatcaaaacaacaaagaaatgttggaaagcttgatacatctcaatgaattcaatgatttt
aagtcaatgttatcattgattcctcttgctatacatacattaaagcaaagtataatggaa
tcacatcttattcatccaaagattgcagaattagggaaaataatttatgaacgattatat
aaagatagcagaagagatggatctataactaagattttgatactttgtgataccaaatgt
caacatttatttgatgaaataattcacactctgataaaaaattgtagttctaaaattgga
gtgaatcctattgctctgccttctggacaacagtcatatacagtagatgatttcgttaag
aacgctattgccagtggatataacattgtcatcataccagttgctgctttatcatcaagt
tttccgtgggataaatttactcttttgttggaatatgaggctaaaaaagattcaccttgg
aaaagaatatcaatgggacttggaattcgacatattgctttagaaatcgaaagaactgaa
tctcaattagacatggatggtgacactgcaaacaatgatgattgtgacatcataacactg
attggttcttcaacaataacacaatgtggaaatcttctgcatctgcttgaaacaagacac
aacattgaaatattggaacgagattatgttgaattaaataaaagcatttcgccaaacgaa
aactcgataacaggacatcctgatataattatagatcagacaacatgtattattgtagaa
acattctcagctttgagtggagaagatggatcacaacttctgcataatattattttgaaa
attttagatttgaaaacaagatttactaaacgttatgttatcattgctgatctgtctgca
aaaaagtcaggctaccccatgagaggagatttccccttaaatttgtcaaaactccacaca
gctttggaaaactttcttcaacaggattcagtttttgagatgaagttgttttgctgcttt
gatgttgaacattttgcttatttaattcaacgtcttgttgaaaattcaaagtcagacaaa
tcgatgagtaaagaaccaaggatgaagcgactgactatgtcacagagtagtcatgaaaaa
ttcctcgtacaatttccaagtattaattctcttgttgcacaaaatatgttgtctattgct
tcattgaaggaaatagcttcgatgagtatttctgaattgcttgaaaggttttcacacatt
tcaaaagaatgtttacaggatttttattccaaacttcatgcaccaggacaacctttgcct
gcattttatgatgaaattgatgtcgatgttacacctgaattcagttttaaacttgagcaa
agtgattctatggcaatgggaaaatcacaagacgagttccctgattttgctgcttacttt
ggtcgtgaatatcaatccaaggatggttcagattgttctagttcccatttcagtgagagt
agctgctttcaacaaagtaatccatttgcttctaatttcgattctctttcttgctcgagt
aaaaacgaatcaaatccttgtagaaaacgacttagatttgagagaatcaaagagtggaaa
gatggtcagactagacttgcttattactga
DBGET
integrated database retrieval system
