Styela clava (leathery sea squirt): 120343318
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Entry
120343318 CDS
T07291
Name
(RefSeq) semaphorin-3D-like
KO
K06840
semaphorin 3
Organism
sclv
Styela clava (leathery sea squirt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
TM_ErbB1
RIFIN
EphA2_TM
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120343318
NCBI-ProteinID:
XP_039268392
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All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MKKARLPLSLILTLAILVYRSYADERPFVTASTSDLETYHTFSPSHSSNFKTLSLSSDTN
TLYIGARDQVFGQTLADITKESFTPVTWPVTKDAFCATLPQSEGGKNCYNLIQIVQPINK
THVLICGTNSLAPENRLLVRENEEGQFSITKDNMIGQTLCSFDPNDSITSLMTRKGEIFS
TPRNDLNSKISFVKVMSNRFLSENKDMNGKKATIVASFTANDTTISPTMSKVYFVSDEEA
PEMKSTNGLAPTITQVCANDIGGQNILTDTWTSLLKVRLLCQTGENFPLHFDLVTDVVTG
RDRIIYGTFSTRHETSRTNAVCAFRLSDIQKSFNEGNFLEAGSNSYETVAAPSGSSLRPG
MCAYPGMLADNPSASTSKDFPAKHLHFMSSHSLIDGIVKPAYPPLASGNREPTSREPLLI
KNGAKFTKIAVEQVKSLDNKDFDVVFVGREDGTIHKFVSFEKDNKIETIELSQYNSPSNQ
PIISMKLSQDFGQLYVGTDRGVFQVSTASCSIYTKSCTFCDPCRMCILSRDPSCAWDKST
QECVSIKSRDKSNLLQDIIHGDGGTQCGTLDIPKPILRKVDERTLLGHVVENPIVSYTWY
KVEDESKKQQIKDVPGKYRITMDGQLEISNFDQKHDVAKYECEYSVKSSIVNVTIYDVKS
STFIPPIVTVTPRSSSPPTIGRGSTTEGGTGEVTKQPTTTPAPINMGIMNITFALVAVFV
TVIIFLIVFLVCRRKKMNKKYRTKEDAESKLTPPAIDGVATTAMNQDNKTNNNNARHPRI
QSEFDDRASRPLLSTNQQPPPEDSDPDNNSTDLPTASQRNAKSLDFLNERETMDYIDDDN
ADAVSDELPAREQAGSIRETTGRKRVPPARTKSMPGSELYVVFGGKKLKCSTLQRNKQGS
WTIQLKPNQSGMVSTDQDEIIDILDDSENTATITTDAEAFHPAEENFSPAKTFENTPAPS
TSSLKNAESRRAFFEPDSSKPSADSSPHVRYMTSTPNNSQIAQKARAPSPFTVVDSKKKP
LTEQPSQASLRSFGQNSSEDRDSDSTVKGSSMTLQQDDTLLASNDKPLSSFENPNTQEHS
HHHHHNKQGALSKVPTKVPTSDVPEYSFSKKGKNKAQKSQKAPSAPVTDNTDFHGSNKSL
DRSSGSSDGDDPLHGRVKSVKRKNRENKTPLDSPSKESRTSQGSSSSSDYKSARSSVISE
PCHDHR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctcgtctgcctctgtcattgattttgacactagcaatacttgtttaccga
tcatatgctgacgaacgcccttttgttactgcttcgacttcagatctcgaaacttatcat
actttctcaccatcgcattcatcaaatttcaaaaccttgagtttgtcaagcgatactaac
actttatatattggagccagagatcaggtttttggacagactctagctgacattacaaaa
gaaagttttactcctgtaacatggccggtaacaaaagatgcattttgtgccactcttcca
caaagtgaaggaggaaagaactgttacaatcttatacaaatcgtacaacccatcaataaa
actcatgtactaatttgtggaacgaattctctcgctcctgagaatagattgcttgtgaga
gagaatgaagagggacaattttcaataaccaaggacaatatgatcgggcagacactttgt
agtttcgatcccaacgactctatcacatctctcatgacacgaaaaggagaaattttttct
acacctagaaatgatttgaattcaaaaatttctttcgttaaagtaatgtcgaatcgcttt
ttatcagaaaataaggacatgaatgggaaaaaagcaactattgtcgcatcattcactgcc
aacgatacaacgatctctccaacgatgtcgaaagtttattttgtttctgatgaagaggct
ccagaaatgaaatcaaccaatggacttgctccgactataactcaggtatgtgcaaatgat
atcggaggtcaaaacatcttgacagacacatggacttcacttctgaaagttcgtcttctt
tgccaaactggagaaaattttccccttcactttgatttggtgaccgatgtcgtcactggc
agagatcgtattatctatggaacattttcaacgagacatgaaacttcgagaacgaacgca
gtgtgtgcattcagactttccgacattcagaaatcttttaacgaagggaattttctcgaa
gctggatctaattcctatgagactgtagctgctcccagtggttcatcactgagaccagga
atgtgtgcttatcctggtatgcttgctgataacccgtcagcttcgacaagtaaagatttt
ccagcgaaacatcttcacttcatgtcttctcacagcttgatagatggaattgtaaaacca
gcatacccaccattagccagtggtaacagggaaccaacttcaagagaaccgttgctaatc
aaaaatggcgctaaatttacaaagattgctgtggaacaagtgaaatcattagataacaaa
gattttgacgtagtgtttgtgggaagagaagacggtactatacacaaatttgtgtctttt
gaaaaggacaacaaaatcgagactattgagctatcccagtataattctccatcgaatcaa
ccaatcattagcatgaaactctcacaagatttcggtcaattgtacgtcggaacagatcgt
ggtgtttttcaggtttctacggctagctgcagtatttacacaaaatcttgtacgttctgt
gatccatgcagaatgtgtattttatccagagatccaagttgcgcgtgggataagtcaact
caggaatgcgtgtcaatcaaatccagagacaaaagcaatcttctgcaagatattattcat
ggtgatggtggtacccagtgtggcacattggatattccaaaacctatattgagaaaagtt
gatgagagaacattactcggacatgttgttgagaatccgattgtttcatacacttggtac
aaggttgaagatgagtcaaagaaacaacaaattaaagatgttccaggaaaatatagaatt
actatggatggtcagctggaaatatcaaacttcgaccagaaacatgatgtggcgaaatac
gagtgcgagtactcagtgaaatcatcgatagtaaatgtcacaatttacgacgttaaatct
tcaactttcataccacctattgtaacagtgactcccagaagcagtagtccacctacaata
ggtagaggtagcacgactgaaggaggtaccggtgaagtgacaaaacaacccacaacgact
ccagcacctatcaatatgggaataatgaatattacatttgctctggttgcggtctttgta
actgtgatcatatttctgatcgtttttctggtgtgccgacgaaaaaaaatgaataaaaaa
tacagaacaaaggaggatgctgaaagcaaattgacaccacctgctattgatggtgttgca
actacggctatgaatcaagataacaaaacgaataacaataatgcgagacacccaagaata
cagagcgaatttgatgatcgggcaagcagacctttgttatcaactaatcaacaaccacca
cctgaggattctgatcctgataacaattcaactgacttaccaactgccagtcaacggaat
gcaaaaagtttagatttcctcaatgaaagggagaccatggattacattgatgatgataat
gctgatgcagtttctgatgaattacctgcacgagagcaggctggttcgattcgtgaaact
acaggtcggaaacgtgttccaccagctcgaactaaatctatgcccggatcagaactttat
gttgtgtttggaggaaagaaattgaaatgcagtactttacaaagaaacaaacaaggatca
tggacgattcaactgaagcccaatcaatcgggcatggtttctacagatcaagatgaaatc
attgatattttagatgacagtgaaaatacagcaacaataacaacagatgccgaagcattt
catcctgccgaggagaacttctcaccagcgaaaacatttgaaaatactccagcaccaagc
acaagcagcttaaaaaatgccgaaagcaggcgtgctttttttgagccggacagcagcaag
cctagcgctgatagctcgccacatgtgcgttacatgacctcaacgcctaataatagtcaa
attgcccaaaaagcgagggcaccttctccttttactgtagtagatagcaaaaaaaaacct
ttaacagagcaaccaagccaagctagtttgcgaagtttcggccaaaactcttcagaagat
cgcgatagcgattcaactgtgaaagggtccagtatgactcttcaacaagatgacacatta
ttagcttcaaatgataagccactgtcatcatttgaaaacccaaacacacaagaacacagt
catcatcaccatcataataaacaaggtgccctttccaaagttcccacaaaagtaccgacc
tctgatgttccagaatattcctttagtaaaaaagggaaaaataaggctcaaaagtcgcaa
aaagctccatcagcacctgttactgataacactgatttccatggttccaataaaagcttg
gacagatcatcaggaagttcagatggagacgatcctctacatggaagagtgaaaagtgtc
aaaagaaaaaatcgtgaaaacaaaacacccttagattcaccatcgaaagaatctcgaaca
tcacagggttcatcttcatcaagcgattataaatcggcaagatcatctgttataagcgaa
ccgtgccacgatcacagatga
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