Styela clava (leathery sea squirt): 120343349
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Entry
120343349 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120343349
KO
K06491
neural cell adhesion molecule
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sclv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120343349
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120343349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120343349
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sclv04515
]
120343349
04090 CD molecules [BR:
sclv04090
]
120343349
00536 Glycosaminoglycan binding proteins [BR:
sclv00536
]
120343349
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sclv00537
]
120343349
04091 Lectins [BR:
sclv04091
]
120343349
Membrane trafficking [BR:
sclv04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120343349
Cell adhesion molecules [BR:
sclv04515
]
Immunoglobulin superfamily
NCAM1/2
120343349
CD molecules [BR:
sclv04090
]
Proteins
120343349
Glycosaminoglycan binding proteins [BR:
sclv00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120343349
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sclv00537
]
Others
120343349
Lectins [BR:
sclv04091
]
I-type lectins (Siglecs)
120343349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Lectin_C
Ig_3
Ig_2
ig
Ig_PDGFR_d4
V-set
C2-set_3
C2-set_2
fn3
C1-set
Motif
Other DBs
NCBI-GeneID:
120343349
NCBI-ProteinID:
XP_039268425
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MISQSWQFDATKMHEYNCWFVLLTFLATSSAGLWKTVNRSFYILTFYNTDSTWYQAKSLC
ESSRSSLVQLDVTSIKNDVLNTVTSSGLVINYWIGATDEASEGHWKWMDGSSASITWNTG
QPNGGRAQNYLGMDRYGKFYDYSSNHNRGVICMKAIPFTISSGIYRLTAIGRPHPKVTYE
TARAECANIQSRILKLTSATQALIKSYLNSDHISNDVNIWGQYVDSRCYSLTLKDYKSKA
TYCTDKHYYICEQAGPHDMQLSIPNFIVDSYTGTKEITCLTSGFPPPTVKWMKGKTVLHS
TSNNNQAKVGKNLVLNLKQLTIEDEGQYKCFASNTVGQKFYEFSRTLDVKVPSQPSITNI
TSSPCNSDLLVTWKPHVRGVGIQHRFQIMDFMNINNYKVFLTTPNNVSMTSRVTRLQSST
SYIIRIEPCLTTSSTCFSQYATSRNATT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatatctcaatcatggcaatttgacgcaacgaagatgcatgagtacaattgctggttt
gttttgttaacatttcttgcaacatcaagtgcaggactttggaagacagtgaacagatct
ttttatatactcacgttttacaacactgactctacctggtatcaggcaaaatctttgtgt
gagagcagcagatctagtcttgttcaacttgatgttacctccataaagaatgacgttctt
aacacagtcacgagttccgggttggttatcaactattggattggggcaacagatgaagcc
tcagaaggacattggaaatggatggatggatcttcagcctcgattacttggaatacaggg
caaccaaatggaggaagggcacaaaattatctcggaatggacagatatggaaaattttat
gattatagttcgaatcacaatagaggagtcatatgcatgaaagcgataccctttacaatt
tcctcgggaatatacagactgactgcaattggaagacctcaccctaaagttacttatgaa
acagctcgtgcagaatgtgcaaatattcaatcacgaattttaaaactgacatcggccaca
caagctctgatcaagtcctatttaaattctgaccatatcagcaatgatgttaatatctgg
ggacaatacgtagattctaggtgctattcgctaacgttgaaagattacaagtcgaaagcc
acatattgtactgacaagcattactacatttgcgaacaagctggaccgcatgatatgcaa
ttatcaatacctaacttcattgtggattcatatactggcacgaaagaaataacgtgcttg
acatctgggttcccaccaccgactgttaaatggatgaaaggaaaaactgtactccattca
acatcaaacaataaccaagctaaagttggaaaaaatttagtcttaaatctaaaacaattg
acaatcgaagacgaaggacaatataaatgtttcgcatcaaatacagttggacaaaagttt
tacgaattttcccgaacccttgatgttaaagttccaagtcaaccatcaatcacaaacata
acttcgtcaccttgtaattccgatttattggtcacttggaagccacatgtccgtggagtt
ggaatccaacacagatttcagattatggattttatgaacatcaacaattataaggttttc
ctaacgacgccgaataatgtctccatgacgtccagagtgacacgtctgcaatcatcaaca
tcttatattattaggattgagccatgcttgacaacttcatcaacttgcttcagtcaatat
gcaactagcagaaatgcaaccacttga
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