Styela clava (leathery sea squirt): 120343386
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Entry
120343386 CDS
T07291
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
sclv
Styela clava (leathery sea squirt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120343386
NCBI-ProteinID:
XP_039268480
LinkDB
All DBs
Position
Unknown
AA seq
1952 aa
AA seq
DB search
MPTESDYDKCADILVRLQEGILKKKSLSKHAPVIRQLLNLVESPAFREISKLQESLKTLS
QEANKEGFDVDKLAFSPEHGGLTLDGKKIEPMKQPEIQETKNVAEFLDQAAQGRETELIE
LVKSENEGLGFSVVGLRSEHRGDLGIFVQDIKPGGVADRDGRLKESDQILVINNQPLAPN
ISHQQAIGILQRVTGVVELLIARGGIPQSQEAAQSDASPQLSRSSSVVSSMSQASGALPD
TQWAEIETIELRNDGRGLGFGIVGGKATGGVAVKTIVDGGVADRDGRLHSGDHILRIGDT
DLRSMGSEQAAAVLRQCGTIVRLVVARGALDGEDIPNVEEQGLENIQRSRRSSSSTSVTV
SISDDESEVGPPITRDMEYFDVELIKDSKGLGITIAGFVQEEGSDNEDEDSTGIYVKSVS
AGSAADIDGRVHAGDQIVAVDGQRLDGPNMSSDEAVEILRSTGVVVRLTIGRPRGGHDTS
RSSSSDSLPELNAPSINNWDEIEKDISKTITPAELDNIKARWQLIMGPQYDIVIVQIKKF
SKTSGLGISLEGTIDDSEQPHHYIRSLLPEGPVGRSQMLQPGDELLEVNKSRILGLHHIE
VVTVIKELPLDVCIVCARPRSRLNIPQMRDSVILEEREGQLFERKPSFDNNVEMMEDQGH
ESVSDHEEDATYDETPIPQPVSPVHNIQESSENEESSSSSSSSESENEENMMVLVPPPKK
VQVVQELDHDMDSAWEDDITVIELDKGNESLGFSILDFQDPVNTQRTAILVRSVVKDGIA
DRDGRLQPGDKLMFVNDVPLRNHTLDTVVGVLKSVAPGIVRIGVSKPKPLFRVLQERQEE
MKQEHKKEIHEDESIPSENYEQAEVQQRSPLFVEPLPPPPVIQHIDVPSSPSSTSSEEQN
VVSQFSYEQKFQYPEQQHQERLVGYPEEFERVEEQNFSHESQPFMLPSPQPEPQHIPPSD
RLSSHSGSEVRSPSIITQSSAEERTMEVKQMQVSGMTAIAVTSSLASSPPQESAKIFEPL
QYPDPSRAQPPPPSPPPPPPSFKIPPPILAPQKPAYSAPSWQEAEESRNMPLSAELYEKT
VHIKKGGDGLGITVSPDRDGDGLTVGSINAGGAVHKSRRPKLGDIIRRINNDSAVGLGAM
QARALIRNHTMFSSDITIVYIPKEYIGAYKEGLPPPRVASPVSSIHTDDERPSSVASIKS
KFEPPNVQKEVKKHNWKLDEINHEYGHANGELHYIELEKGNSGLGLSLAGNKEKPQQSIY
VVGINPSGAAAKDGRVKVGDELLEINGIPLSGPNTHQVALSVIKAAESKIGIVLCRSNTS
VTPLEHAKKEKPVSPASSSHTLEKEQALIPAQAISPEKVKSQSTSSISSEHRSKSRSSTS
SRSSRTSSRSSEVSAPRPQTRVIKLVKDFQGLGFAISETSSGIVVQSIAADGTADRDGRL
KKGDFILAVDDKSLEGMSYESAVKVLKDARGTVKLVVASEPVKSGKQQSGRSSSQPDPLI
CPIVNGHETTIEIIKGKSGLGVSIVGGADSLLGSIFVHTVYDEGAAAKDGRIWPGDRILR
VNDHDLRSATHDQAIEVLRNTPSRVMLTILRNDNNDPQKPDIYTFDVFLEKRPDRGLGLS
ILGKGNDGGVYVSNIVPGGTAANEGSIRPGDQLLAVNGQNVQKATQNDVAAMLKNAIGNI
HFKLGRSPDTPTPTSPNPVFSPSATSVTSQSSRKSSRNNSGASGNGSAKSDERLVEIWKT
PTQPLGISISGGVGSPLGNVPIFVAMVQPTGAAANKLKVGDKILSINGQSTVNKTHDDVV
RMLKSGDDAIVVLKVRQGGQDMQALGEYLADNASTVSSRVVPSSFGSNEALSPSMGSDMN
YNESRCIDINLDRGPEGLGFSIVGGIGSVHGDLPIFVKSVFDVGAAAVDGRLKRGDRIIA
VNGQSVDGCTHEEAVTVLKRARGRIVLRVMPS
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagaaagtgattatgacaaatgtgcagatatcctggttcgtcttcaggaaggc
atattgaagaaaaagtcattgtcgaaacatgcaccagttatacgtcaactattgaacctt
gttgaaagtccagcatttcgtgaaatatccaaattacaggaatcattaaaaacactcagt
caagaagcaaataaagagggatttgatgttgataaactcgctttttcaccagagcatgga
ggattaactcttgatggaaaaaaaattgagcctatgaaacaacctgaaattcaggaaaca
aaaaatgttgcagaattcttggatcaagcagctcaaggacgagaaactgaattaattgaa
ttggttaaatctgaaaatgaaggtttaggtttcagtgttgttggattaagatcagaacac
agaggagatttgggaatatttgtacaagatataaaaccaggtggtgtggccgatcgagat
ggtcgattgaaagaaagtgatcaaatactagtaatcaacaatcaacctctggcgcccaat
atttcccaccagcaagctatcggtatacttcaaagagttacaggtgtagtggaattgctc
attgctcgaggaggaatcccacaatcacaagaagctgcacagtctgatgcaagtccgcag
ctatctcgatcatcatctgtggttagttcaatgtcacaagcatctggcgctcttcctgac
acacaatgggctgaaattgaaacaatagaacttcgtaatgatggaagaggactgggattt
ggtattgttggtggaaaagccactggtggggtggctgtaaaaactattgttgatggaggt
gttgcagatcgagatggtagacttcattcgggagatcatatactaagaattggggatact
gacttgcgttcaatgggttctgagcaggcggctgctgttttgcgacaatgtggcaccatt
gttagacttgtggttgctaggggtgccttggatggtgaagatataccaaacgttgaagaa
caagggcttgaaaatatacaaagatctcgtcgttcctctagttctacatcagtaacagta
agcatttcagatgatgaatctgaggttggacctcccatcactcgagatatggagtatttt
gatgttgaattaataaaagattctaaagggcttgggatcaccattgctggatttgttcaa
gaggaaggaagtgacaatgaagatgaggattctacaggaatttatgtgaagagcgtttca
gcaggatctgctgcagatattgatggaagagtacatgctggtgatcaaattgttgccgtg
gatggacagcgtctcgacggaccaaatatgtccagtgatgaagctgttgaaattctaagg
tctactggtgttgttgtcagactgaccattggtaggccaagaggtggtcatgacacatcc
agatcctcaagtagtgatagtttgccagaattgaatgctccttccataaataactgggat
gaaatagaaaaagacatcagcaaaaccataaccccagcagagctagataacattaaagct
cgttggcaattaatcatgggaccacaatatgacattgtgattgtgcaaatcaaaaagttc
agcaaaacaagcggtctcggaataagtttagaaggcactattgatgatagtgagcaacct
catcattacatcagatcgctattacctgaaggtcctgtcggacgaagccaaatgttgcag
cctggtgacgaacttttagaagtgaataaatctcgtattctaggacttcatcatatagaa
gtagtcactgtaattaaagagctacctttggatgtgtgtattgtttgtgccagacctcgc
agtaggttgaatattccacagatgcgggattctgtaatacttgaagaaagggagggacaa
ctttttgaaagaaaaccatcatttgacaataatgttgaaatgatggaagaccaaggacat
gaaagtgtttctgatcatgaagaggatgcaacatatgatgaaactcccattccacagcca
gtctcacctgttcacaacatacaagaatcttcagaaaatgaagaatccagcagcagtagc
agtagtagtgaatctgaaaatgaagaaaatatgatggtacttgttccgcctccaaaaaag
gtacaagttgtccaagaacttgaccatgatatggatagtgcttgggaagatgatatcact
gtcattgagttagacaaggggaatgaaagtctgggtttcagtattttggattttcaagat
ccagtgaatactcagcgtactgcgattcttgtcagatcagttgttaaagacggaatcgcg
gatcgggatggtcgtcttcaacctggtgataaattgatgtttgtaaatgatgtgccgttg
agaaatcacactttagacacagtggttggtgtgctgaaaagtgttgcacctgggattgtt
agaattggggtatcgaaaccaaagcctctattccgagttctgcaagaaagacaagaagag
atgaaacaagaacacaagaaagagattcatgaagatgaatcgatcccatctgaaaattac
gaacaagcagaagtgcagcaacgatctcccttatttgttgaacctttacctccaccacca
gtaatccagcatattgatgtaccatcttcacccagctcgacttcaagtgaagagcaaaac
gtcgtctcacagtttagttatgaacagaaatttcaatacccagaacaacagcatcaagaa
cgattagtaggatatccagaagaatttgaaagagtagaggagcaaaatttttcacacgag
tctcaaccatttatgcttccctctccacaacctgaaccacagcacattcctccttcagat
agactgtcttcacatagtggttcagaggtcaggtcacctagcatcattactcagtcatct
gccgaagaaagaacaatggaggtgaaacaaatgcaggtttcaggcatgactgcgattgca
gttacaagcagtctggcatccagtccaccacaagaaagtgccaagatatttgaaccactt
caataccctgacccatctagagcacagccccctccaccatctccaccccctcctcctcca
tcttttaaaatcccgcctcccatcctagcaccacaaaagccagcatattctgctccttct
tggcaagaggcagaagagtctagaaacatgcctctatctgcggaattatatgagaaaaca
gttcatataaagaaaggtggtgacggactcggtattacagtcagtccagaccgagatgga
gacggacttactgttggctccataaatgcgggtggagcggttcacaaatcccgtagacca
aaacttggtgatattatcaggcgtattaacaatgactctgcagtggggcttggtgcgatg
caagcacgcgctttaatcaggaatcacactatgttcagctctgatataacgatcgtctat
attccaaaagaatatattggtgcgtataaagaaggtctgcctccaccaagagttgcctca
cctgtgtcttccattcacacagatgatgaacggcctagtagtgtggcttccatcaaatcc
aaatttgagcctccgaacgtgcagaaagaagttaaaaaacacaattggaaattagatgag
ataaaccatgaatatggtcatgcaaatggggaattacattatattgagttagaaaagggc
aacagtggacttggattaagtctggcaggaaacaaagagaaacctcagcaaagcatttat
gttgttggaatcaatcctagtggtgccgcggctaaagatgggcgtgtcaaagttggtgat
gaactccttgaaataaacggcatacctctgtcgggacccaacactcaccaagttgctcta
tctgttatcaaagccgctgaatcaaaaataggaattgttttatgccgaagtaatacatct
gtgaccccattggagcatgcaaagaaagaaaagccagtttcaccggcatcctcatcacat
acattagaaaaagagcaagctcttattcctgcacaggccatatctcctgaaaaagtaaag
agtcaaagtacatcgtctatttcatcagagcaccgttcaaaatcaagatcatcaacttca
agcaggagtagtagaacttcctctcgtagttctgaagtttcagcgccacgtcctcaaaca
agagtgatcaagctagtgaaggattttcaaggattgggtttcgcaatatctgaaacttct
agtggtattgtggtgcagtcaattgctgctgatggtacagctgatagagatggacgatta
aaaaagggtgattttatccttgccgttgatgacaaatcacttgagggaatgtcatatgaa
tctgccgttaaagtattaaaggatgcaagaggaactgtaaagttggtggttgcctcggaa
cctgtaaaatctggcaagcaacaatctggtagaagcagcagtcagccagatccattgatt
tgccccatagtcaatggtcatgaaacaacaatcgaaatcatcaaggggaaatccggttta
ggtgttagcattgttggtggagcagattccttacttggttcaatatttgttcacacagtt
tatgacgaaggtgctgcagcaaaagatggaagaatctggcccggagatcgtattttaagg
gtaaatgatcatgatttaagatctgccacacatgatcaagctattgaggttttgagaaat
acaccaagtcgtgtcatgctgactattttaagaaatgacaacaatgatcctcaaaagcca
gatatttatacttttgatgttttcttggaaaaacgaccagataggggcctgggtttgagt
atccttggcaaaggtaatgatggaggtgtgtatgtaagtaatatagtacctggtgggaca
gcggcaaatgagggctcaatccgacctggtgatcaactccttgctgtgaatggacaaaat
gtgcaaaaagccacacaaaatgatgtcgctgcaatgctgaaaaatgctattggaaatatt
cacttcaagttagggaggtcgcctgatactccaacaccgactagtccaaatcctgttttt
tctccttcagcaacttcagtcacttctcaatcgagtagaaaatcatcgcgtaataattct
ggggcaagtggaaatggatcagcgaaaagtgacgaacgcttggtcgaaatatggaaaaca
ccaacacaacctttgggaatcagcatatcaggaggcgttggttcccctcttggaaacgtt
ccgatatttgttgctatggtgcaaccgactggtgctgcggccaataaactgaaagtcgga
gacaaaatattgagcattaacggccagtcaaccgtaaacaaaacacatgatgatgtagtg
agaatgctaaaaagtggagatgatgcaattgttgtattgaaagttcggcaaggaggacaa
gacatgcaagcattgggagaatatttagctgataacgctagcactgtatcaagcagagtt
gtaccatcgtctttcggatcaaacgaagcactctcacccagtatggggtctgatatgaat
tataatgaatcaagatgcattgacattaatctggacaggggtcctgaaggtcttggtttc
agtatagttggtggcattggttccgtacatggagatctgcctatttttgtaaagtctgtg
tttgatgtaggagccgctgctgttgatggaagactaaaaagaggagacagaattattgca
gtaaatggtcagagtgtggatggatgtactcatgaagaagctgttacagttctaaaaaga
gcaagaggaagaattgtgctgagagtgatgccatcataa
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integrated database retrieval system