Styela clava (leathery sea squirt): 120343489
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Entry
120343489 CDS
T07291
Name
(RefSeq) lamin-B1-like isoform X1
KO
K12641
lamin A/C
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120343489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120343489
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
120343489
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF4407
HAUS-augmin3
KIF21A_4th
IFT20
DUF7522
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
120343489
NCBI-ProteinID:
XP_039268615
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSTPRQQSRRKEQSRQQGSPSTPLSPSVTSRREEKDQMINLNNRLAAYIEKIRSLETENR
RLQIQVTSHEETSSREVSNIKEMYETEIKEARRLLDEVAKERAQLQLEVASLQDRSDSEK
IRADGLEHDNSVLEGKLKDASKRLRAKEAQTANALKERDDAVAQLDSFKAKVNDLAQELE
TTRKTLESETLQRIEYQNKLQSLQEDLQFKEKLWKEEVRESRRRHDVSVTEIDENIKVDY
ESRLEAAIADLRDQQNYEIDQMRDDLESQYKAKIESARAQVDSTRKLLTQLQEGSKSSQM
KIDRFQTTIRSLESENKKLLHRIGDLEGQLEAAIELKRAAVAVVEEERDELRSRLDEMET
EYAELLNLKLHLDMEISTYRKLLEEEEARLNISPGQTESDSKLRTRAARRKRKRVGQTES
QEISMKQQKQDTSSSASASAGTTTITRETVTVEQTTRQRSTLEVGKEDLFHEQGEPQSEG
EKSCVVM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaccaagacaacaaagccgcaggaaagagcagagtcgtcaacaggggtcaccg
tctaccccattgagtccttctgttacaagcagaagagaagagaaagatcagatgattaat
ttgaacaatcgtcttgctgcatatatcgaaaaaattcgttcacttgaaactgaaaacaga
agactgcagatccaagttacaagtcatgaagagacgagcagcagagaggtttcaaacatc
aaggagatgtatgaaacggaaatcaaggaagcaagacgtttacttgatgaagttgcaaag
gaaagagctcaacttcaacttgaagttgcatcattacaagatcgttctgattctgaaaag
atcagagctgatggtttggaacatgataattcagtgcttgaaggaaaattgaaagatgca
agtaagagattgcgagccaaagaagcacaaactgcaaatgcattgaaagaaagagatgat
gctgttgctcaactggattctttcaaagctaaagtgaatgacttggcccaggaattggaa
actacaaggaaaactctggaatcggaaacattgcaaagaatcgaatatcaaaacaaactt
caatcactacaagaagatttgcaatttaaagagaagctgtggaaggaggaagttcgagaa
tctcgtagacgtcatgatgttagtgtgacagaaattgatgaaaatatcaaagtggattat
gaaagtcgattggaagctgcgattgccgatcttcgtgaccagcaaaattatgaaatcgac
caaatgagagatgatttggaaagtcaatacaaagcgaagattgaatcagcaagggcacaa
gttgattcaactcgcaaattattgacacaattgcaggaaggatcaaaatcatctcaaatg
aaaattgatcgtttccagactactattcgtagcttggaaagtgagaataagaaacttttg
cacagaattggagatttggaaggacaactggaagctgccattgaattgaagagagcagct
gtggcagtggtggaagaggaaagagatgagcttcgttcaagactcgatgaaatggaaact
gagtatgctgaactattgaatctgaagttgcatcttgacatggaaattagcacatatcgt
aaattactggaagaagaagaggctagattgaacatcagtccaggacagactgaaagcgac
tcaaagctgagaactcgtgctgcccgcagaaagcgcaagcgtgttggacaaactgagagt
caagaaatatcaatgaagcaacagaagcaggacacttcttctagtgcaagtgcatctgct
ggtacgacgaccatcacacgggagacggtcactgttgaacagactactcgtcaacgcagc
acacttgaggtagggaaggaagatttatttcatgaacagggagaaccacagtcagaagga
gaaaagtcatgtgtagtgatgtga
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