Styela clava (leathery sea squirt): 120343867
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Entry
120343867 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-beta-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120343867
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120343867
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120343867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_5
AAA
AAA_7
MCM
ICAM_N
Cas9_a
ResIII
Motif
Other DBs
NCBI-GeneID:
120343867
NCBI-ProteinID:
XP_039268822
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAAFSSTSLPIPLENKDKFIRLHLYLLLEGFDESVIANNYEKSGIVCQLKDIRKEIYYEK
RNHFYYATTKIPADIKKLKYRIAVRFTECTHEVLYCGDRLGQRKQKIEKGFDQVATFDVM
NRQLQVQFQHHRNTAWENIIKAELPKFLLDEEDLFPWKQKLSSWIYQMGTGWTLKGPHTS
NDIDVKMNKENISQVYRNALNKVKGITPSENISKMITFVAMTSPDLKIEYGEFDIIYKSL
AMHNLTETEQRALYVQIKNDAKEFGYGKNLNNVISSLFEKIYESNQPEWILALPLYWLIN
NEEYRNKSSTFNNSDCGAELPQTMGNDWATILKNMKNDYSQRRLKDIFEQIVKLSKLHPW
IARPYFSMMECKGMMTLLSGHQDLLFDPCIIVSILSSHLKDGKLELTDMRAVDRYFIKFV
NDVCVKKNRNKEPQLIIFIVENIVEAALEKDLNWEVLIWTMNFLSKCVNADSGCQILRDG
TEGQMIRFASAVETLIQKINIDTTNCWKNFFMNNINNMTQIFNCKWQSETIQKTWLFKIT
WCLVEKIKEFGSMASNFLEAYSTLPDILNKDLEKIFDEAAYNFFRSLFKCNDLFGYGWIS
SQWELKNLSKFSEDFFQEESNSFRHKDATNDQERQLEFVLNWEYSAKFYHDIYGKLELQE
NSHIKKFTDTLKKSVLEDLQTKQIPLGMLFILSSKPDVVKKLVLESKSDSQESNEQALGN
LERLRKDVINFRNMVKRAQELKTLCFICEQVGIELQNHKTMTDIPELYQMVTLTEMEKFI
PLSYGVDWEDTEWSLIDYMESKMKNVVFLHRLTEIPQIFYDKLTNLSTKEALKLLSRFLG
TLHEYAEQIAQGNISIKILQTWAESLSGPGKTMENEVANFYKDSMQYKAGQDSNAQEEII
ADIRKKIQWYVKVMDCKPTIDILISLKDKFDSEGQEFDMCLKIREFLKDETSQLKSLITI
SSFIPTLDNILNRFKSSSVDMPVIAASFLQENEFVEWLQEKLIDIAELGVLAELALTFGI
DGGVKTVSSFVSAVNGFEPLLFNMHELTFEKLLRKCERLMDNATADENLVKNWQISAANL
EFFHEIEFSRGSIEKSSLQAVRSINEKGIFNISLKLGVPATLENVVHVYIPTVGTSNDQR
SGRRDALDFIYLRNLQSTLTLMGGLVDTGTPARYSHIFGIVEKLANTLIRLVEDGFTLFN
SCCIKILPGEEEHIRMKIFFKGEERESVQQRFSLTDAEVVERELDKTHMKWKQHVKDLRM
KYYYLNEYSISQIVYLCNQLSDESLTAETHQDQVNSLLSIICPEITFNDIRELLQMTKKQ
LMGTKPKNKQEEPEECDDEMQNMKDGVEKVKAAMKRKTKQKQTERLAKAAVMEKGWSDIK
QCKTWIMKNESDQTLIKELSTQFDRKIVDLKNSKMSAITEASVYSEIPSTHGTILKYLNE
KCMFFTADSAVSDRKDFISMAHLGEFLTQLRHRNKIKKLKRILPWPLREGLPNLVTCSDQ
DMLLRVLSLYMEDLDQPLPTASEVLICTEKTTEDDVERFFCRAMGESENSGSLLFCMAYL
DRLTDLVMKAVENIYEDLKKSDNKNYQLVVLSNDSNNYLANSFKEFQVADNFVKDQEVVS
CYVQKHLIVGNEFNKSIAGVDKFRSSVRFVVSSTVGAGKSLHISRKQEEAKKAFKEKPRI
ATLRFLEKEVKPDMAIRKLLPKQFRGSYKDQIFVHIDITNAVKNGIEEFMFNLFVLGRIV
DKSGKVWIKHPNQYYMIEITDQDLVSSKYSKISMLNLFPNIVALQPKEVISGKFEDNTTA
MDSEMFVSPLFQRPYQYLKLYREYIATPKKREKSLNEFTYSEIKNKGTQEECIKILLEYC
GDKALWSQVKHFVTFLDSQLKMCEIWYKENKKLINDAKSIVMKYIIEMGKRFIGVLDDNE
NNASPRDKSMIFFHEVNLDDKQEVHMTFFKVKRVPPNLLKLIKESDKIGGKFHIVEEFDD
QEREKQLRTLRLITNALTSNEDPDPTYKLTTDNLQKIISLNMRIQCKIPVILEGETGCGK
TRMVEFLSKLNKASDKNARVLITRKVYGGITASDIQESIKEAEKLWSQSKTDEDMRLLFF
DEANTTEAIYAIKEVMCDNTFDGEAVAMENTTIIAACNPHKEMSKTAIEHLKSCGLGSKI
HANQADEKSGSGMRNLVYKVLPLPPSMKPYVWVMKQADECTENLYIEQIAKNITSIVKTE
DLSKLVSEAHQFIKEHNDGFRFVSLRDVERTRNSHPLNRIFAN
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttttcttcaacttccttgccaatccctttagaaaacaaagataaattcata
cgattgcatctgtatctactactggaaggatttgatgagtcagtaattgccaataattat
gagaagtctggtattgtctgtcagttgaaagacataagaaaggaaatttattatgaaaaa
agaaatcacttctactatgctactacgaaaattcctgcagatattaaaaaactaaagtat
aggattgcagtacgctttactgaatgtacccatgaagtattatattgcggagataggctt
gggcaaaggaaacagaaaatagagaaaggatttgatcaagtcgcaacgtttgacgttatg
aaccggcagctacaggttcagtttcaacaccacaggaacactgcttgggaaaatattata
aaagctgagctaccaaaattcttgttagatgaggaagatctctttccatggaagcagaag
ttgagttcatggatttatcaaatgggcacgggttggacactgaagggcccccatacatca
aacgatattgatgtaaaaatgaataaagaaaacatttctcaggtatatagaaatgcgcta
aataaggttaaaggtattacaccttctgagaacatttctaaaatgattacatttgttgca
atgacttctcctgacttgaaaattgagtatggtgaatttgacatcatctacaaatccctg
gccatgcataacttgacagaaactgaacaaagagctctttatgtacagatcaagaatgat
gcaaaagaatttggatatggcaagaatctcaacaatgtaataagcagtctttttgaaaaa
atatacgaatcgaatcaaccagaatggattttggctctgccattgtattggttgataaac
aatgaagaataccggaacaaaagttctacatttaataactctgactgtggtgctgaattg
ccacaaacaatggggaatgattgggccaccatattgaaaaatatgaaaaatgattattcc
cagaggcgtctcaaagatatttttgaacaaattgtcaagttgagcaaacttcacccatgg
attgcaaggccatattttagtatgatggagtgcaaaggcatgatgactttactaagtgga
catcaagatttactttttgatccttgtatcattgtatcgattttatcatctcatctgaaa
gatggaaaattggaactcaccgacatgcgggctgttgatagatatttcattaaatttgta
aacgatgtttgtgtaaagaagaacagaaacaaagagccacagctgattattttcattgtt
gaaaatatagtcgaagctgctttggaaaaagacctaaattgggaagttttaatttggaca
atgaactttttgtctaaatgtgtcaatgctgattcgggttgccaaattttacgagatgga
acagaaggtcagatgataagatttgcctcggcagttgaaacattgatccagaagatcaac
attgatacgacgaattgttggaaaaatttcttcatgaataatattaataacatgactcaa
attttcaactgtaaatggcagtcagaaactatacagaaaacctggctgtttaagattaca
tggtgcttagtggaaaaaattaaggaattcggatccatggcatccaattttctggaagct
tactccactttaccggatattttaaacaaagatttggagaagatctttgatgaggcagcg
tataattttttcagaagcctcttcaaatgcaatgatctcttcggttatggttggataagt
tctcaatgggaactgaaaaacttgtcaaagttttcagaagacttttttcaggaggaaagt
aattcattcagacataaagatgcaacgaatgatcaagaaaggcaattggagtttgttcta
aattgggaatactctgcaaaattttatcacgacatttatggcaagcttgaactgcaggaa
aatagtcatataaaaaaattcacagacacattgaaaaaaagtgtcctggaagatttgcaa
accaaacaaattccgttgggaatgctgttcattctttcatcgaagccggatgtggttaag
aaacttgttttagaatcaaaaagcgattcacaagaatcgaatgagcaagcattgggaaat
ttagagagactcagaaaagatgtaataaatttcagaaatatggtgaaacgagctcaagaa
ctgaagactttgtgttttatttgcgaacaagtgggtattgaactacaaaatcataaaacg
atgacagatataccagaattgtatcaaatggttactttgacagaaatggagaaattcatt
cctctatcttatggtgttgactgggaagataccgagtggtctttaatagactacatggaa
tcaaaaatgaaaaatgtcgtgtttttacaccgattaactgaaattccacaaatcttctat
gacaagcttacaaacttgagcacaaaagaagcattaaaactgctgtcacggtttcttggc
acacttcatgaatatgctgaacaaattgctcaaggtaacatttctattaaaattctccaa
acatgggcggagtcattgagtgggccaggaaaaaccatggaaaacgaggttgcaaatttc
tacaaagattcaatgcaatacaaagcagggcaagatagcaatgcacaagaagaaattatc
gcagatattagaaaaaaaatacaatggtatgttaaggtgatggactgcaagcctactatt
gatattctgatttcgctaaaagataagtttgattcagaaggacaagaatttgacatgtgt
ttgaaaataagggagtttttaaaagacgaaacgtcgcagttgaaatctttgattactatt
agcagctttattccaacactggataatattctgaatagatttaaaagtagtagtgttgac
atgccagtaatagcggcatcatttttgcaagaaaacgaattcgttgagtggctgcaagag
aaattaatcgacatagcagaacttggagttctggctgaattagctttgacatttgggatt
gatggtggagttaaaacggtttcaagttttgtcagtgccgtaaatggctttgagcctctt
ctattcaacatgcatgaattaacatttgaaaaattgctacgaaaatgtgagagattaatg
gataatgcaacggcagatgaaaaccttgtgaaaaattggcaaatttcggctgccaatttg
gagttttttcatgaaatcgaattcagtcgtggatctattgaaaaaagttcgttacaagct
gttcgaagtataaatgaaaaaggaattttcaatattagcctgaaactaggtgtcccagca
actttggaaaatgtagtgcatgtatacattcctacagttgggacatctaatgatcagcgt
tctggaagaagagatgcattggatttcatctacttacgaaacttacaatctacattgact
ttaatgggaggactagttgatactggaacgcccgctcgttatagtcatatatttgggatt
gttgaaaagctggcaaataccttgatacgtctagtggaagatggcttcacactattcaac
agctgctgcatcaaaatcttacctggtgaggaagaacatatacgaatgaaaatatttttc
aaaggggaagaaagagaatcagtgcagcagcgattttcgttaactgatgcagaagtggtt
gaaagggagcttgataaaactcacatgaagtggaaacagcatgttaaagacctgcgaatg
aaatattactacctgaatgagtactcaatcagccaaatagtttatctttgcaatcagtta
tctgacgagagtctcactgcagaaactcatcaagatcaggtaaattctttgctttcaatt
atctgtccggaaataacgtttaatgatatccgagaactattacaaatgacaaaaaaacag
ctgatggggacaaaaccaaaaaataaacaggaagaaccagaagaatgtgatgatgaaatg
caaaatatgaaagatggtgtagagaaagtgaaggcagcaatgaaaagaaaaacaaaacaa
aaacaaaccgaaagactagccaaagctgctgtaatggaaaaggggtggtcagatataaaa
caatgcaagacctggataatgaagaatgaatcagaccaaaccttgattaaagaattgtcc
acacagtttgacagaaagatagttgatttgaaaaattcaaaaatgagtgcaataacagaa
gcatcagtatattcagaaattccaagcacacatgggactattttgaaatatctgaatgag
aaatgcatgttttttactgccgactccgcagtgtcagaccggaaagattttataagcatg
gcccaccttggtgaatttctcacccagttacgccatagaaataaaatcaaaaaattgaag
cgtatacttccttggcctctgcgggaaggcctgccaaatttggttacttgctcagaccaa
gacatgcttctaagagttctttcactttacatggaggatttggatcagcctttgcctaca
gcatccgaagttttgatctgcactgaaaaaactacagaagatgatgttgaacgttttttt
tgcagagcaatgggtgaaagtgaaaacagtggctcgctcttgttctgtatggcatatctg
gatagactgacggatttggtaatgaaggctgtagagaatatttatgaagatctgaaaaaa
tctgacaacaagaattatcagcttgttgtcttgagcaatgattcaaacaactaccttgct
aatagttttaaagaattccaagttgctgataattttgtcaaagaccaagaagtagtatca
tgttatgttcaaaagcatttgattgtcggtaacgagttcaacaaaagtattgctggagtc
gataaattcagaagttctgtcagatttgtggtgtctagtactgttggtgcagggaagagc
ctgcatatatcaaggaaacaagaagaagcaaaaaaggccttcaaagaaaagccacgcata
gcaaccttgagattccttgaaaaagaagtgaaacccgatatggcaataaggaagcttcta
cctaagcaattcagagggtcgtataaagatcaaatctttgtgcatatagatataactaat
gctgttaaaaacggcatagaagaattcatgttcaacttgtttgtccttggtcgaattgtg
gacaagtcaggaaaagtatggatcaagcatcccaatcaatattacatgattgaaataacg
gatcaagatcttgtctcttcaaagtattcaaagatttcaatgctcaatctatttcctaac
atcgtggcacttcagcctaaggaagtcattagtggaaagtttgaggataacacaactgct
atggattctgaaatgttcgtgtcacctctttttcaacggccctatcagtacttgaaactc
tacagagaatatatagcaacaccaaaaaaaagagaaaagtcacttaatgaattcacttat
tctgaaatcaagaataaaggcacacaagaagaatgcattaaaatattgttggagtactgt
ggagacaaagcattatggtctcaagttaagcatttcgtaacttttcttgactctcagctc
aagatgtgtgagatttggtataaagaaaacaaaaaactgatcaatgatgccaaaagcata
gtgatgaagtatataattgaaatgggtaaacgatttataggcgtacttgacgacaatgaa
aataatgcttcacccagggacaaatccatgatattttttcatgaagtgaatttggatgac
aaacaagaagtccatatgacattttttaaagtcaagagagtcccaccaaatcttctgaaa
ttaatcaaggaatcggataaaattggtggaaaatttcatatagtggaagaatttgacgat
caagagagggaaaaacagcttcgtactttgagattgattacaaatgccctcacttcaaat
gaagacccggaccctacttacaaattgaccacagataatctacaaaagattatttcatta
aacatgagaattcagtgcaagattcctgtgatattagaaggagaaactggatgtggaaaa
acaaggatggtagaatttctcagtaaacttaataaggcatcagataaaaatgctagagtc
ctgattacaagaaaggtgtatggtggtataactgcctctgatattcaagaaagtatcaaa
gaagcagaaaagctgtggtcacagagtaaaacagacgaagacatgagactgttatttttt
gatgaagcaaacacaacagaagccatatacgcaattaaagaggtgatgtgtgacaataca
ttcgatggagaagctgttgcaatggaaaacacaacaataattgctgcttgtaacccgcat
aaggaaatgtcaaaaactgctattgagcatctcaagtcttgtggactgggaagcaaaatc
catgctaatcaagcagatgaaaaaagtggcagtggaatgcgaaatctagtgtacaaagtt
ttaccacttcctccaagtatgaagccctatgtttgggtcatgaaacaagctgatgaatgt
accgaaaatctatatattgaacagattgccaagaatattactagcattgttaaaactgaa
gatcttagcaagcttgtgtccgaggcccatcaattcattaaagagcataacgatgggttt
agattcgtcagtctgcgagatgttgaaaggacaagaaactcccatccattgaaccggatt
ttcgcaaattaa
DBGET
integrated database retrieval system
