Styela clava (leathery sea squirt): 120344132
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Entry
120344132 CDS
T07291
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120344132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120344132
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120344132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
120344132
NCBI-ProteinID:
XP_039269150
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MGEFAVHRCQLFEYTPCTIQCIASYESSEGTASQKLLAVGRENGAIDLIRCTKTGFYKYM
GIPASSTRHLEDIAWYNGRLFSAELQGIISEYDLVKGTIKRTEDSYGGAVWCLAVGNKKG
VIAAGCEDGSLKIYNCEKNSLSFEKSFDKQEGRILSCAFHPDNDVLVSGSVGVIRIWSYK
SGHAMQRINLESSRSKNTIVWAVKILSNNTIVSGDSTGKVNFWNGKNTTLLKSFQNHRAD
VLSLCVSHDEKVVYASGVDSRVLAINCSSAMVGEDDPSSATTVDSWVLGATLQKHTHDVR
ALAIVGNYLVSGGVDTNILLCNIKKGDFTKIKRMVDFPHKSVVHIAENPRLVLFQYPKHL
DIWRIATPRRVNGEAGEKIDLEQDPAIVLQIKMPASQFDDITCSAISKCGHWVAYSSQSS
FRLFRLQWEKETPSEISLNKIPIMWIKSALAIAFTPASEYLITSASNGKIFVIKLEPDGH
VHVAHVFKNETDSILNVPAVLFSATNELFAAVDLNDNIKIYDLEKPEIRCTLPSQDSSPT
AISFKPSSTKLIVAYQNHAVIEYDADMKSYTKWSREANSVSLNLIEFPCKYTKRPKKLGK
WNTSPIINISFNADDPNIILLSSQKALYFLNTSSDILKKIISHEKQRSENAVEQSKEYAA
ELRNRRKMLENPVKSCDKFEQLLHASFIDGGSSIFVLERPWHDIFDNLPPTLYQKKFGT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttgctgttcatcgatgccagttgttcgagtacactccatgcactatacaa
tgcatcgctagttatgaatcgtctgaaggtactgcttcacaaaaattgttagcagttggg
agagaaaatggagctatcgacctcatcagatgtacgaagactggtttttataagtatatg
ggtattccagcatcttctactcgtcatttagaagatattgcatggtataatggtcgacta
ttttctgcagaactacaaggaataatcagtgaatatgatttagtaaaaggaactatcaag
cgaacggaagatagttatggtggagctgtttggtgccttgctgtaggaaataaaaaagga
gtcattgcagctggctgtgaagatggaagtttaaaaatctacaattgtgagaaaaacagt
ttgtcatttgaaaaatcatttgataagcaagaggggaggattctctcctgtgcttttcat
ccagacaatgatgtcttagtctctggatctgtgggtgttataagaatctggagttacaaa
agcggtcatgctatgcagagaataaacttggaaagttctagaagtaaaaacacgatcgta
tgggctgtcaagattttaagtaacaatacgattgtgagcggcgattcaactggtaaagta
aatttttggaatggcaaaaatactacattactgaagtcatttcaaaatcatcgtgctgat
gttttgtccctctgtgtttctcatgatgaaaaagttgtttatgcatctggtgttgattca
cgagttttagctattaattgttcatctgcgatggtgggcgaagatgatccgtcttcagca
acaactgtagactcttgggttctaggtgcaaccttgcaaaaacatactcatgatgtccgt
gcactcgcaatcgtaggaaattatttagtatcgggaggtgtggatactaatattttgctt
tgcaatatcaaaaaaggggactttactaaaattaaaagaatggttgattttccccataaa
agcgttgttcatatagctgaaaacccaagattggttttgttccagtatccaaaacatttg
gatatatggagaattgcaactccacgtcgggtgaatggtgaagctggagaaaaaattgat
ttagaacaggatccagccattgttctccaaataaaaatgcctgcaagtcaatttgatgat
atcacatgttctgccatctcaaaatgcggccattgggttgcatattcatctcaatcatca
tttaggcttttcaggctacaatgggaaaaagaaacaccttctgaaatatctctaaataaa
attcctatcatgtggattaaatctgcattagcgattgcattcactccagcctctgaatat
ttgataacctcagcatcgaacggtaaaatatttgtcataaaactagaacctgatggccac
gttcacgtagctcacgtattcaaaaatgaaaccgatagtatccttaatgtacccgctgtg
ttatttagtgccaccaatgaactctttgcagctgtagatttgaatgataatatcaaaatc
tatgacttggaaaaaccagagattcgatgcacattgcccagtcaagatagctcacctact
gccatttcttttaaaccatcctctaccaaacttatagttgcataccagaatcatgctgta
atagaatatgatgctgacatgaaatcatacacaaaatggtccagagaagcaaattctgtt
tcactcaatttaattgagtttccgtgcaaatataccaaaaggccgaaaaagcttggaaaa
tggaatacgtctccgataataaatatttcgttcaacgcggatgatcctaatattatcctt
ttgtcttctcaaaaggctttatacttcctgaatacttcgtctgatattttaaaaaagatc
atttctcatgaaaagcaaagatcggaaaatgccgttgagcaaagcaaagaatatgcagct
gaactcagaaataggagaaaaatgttggaaaatccagtcaaaagttgtgacaagtttgaa
cagttgttgcatgcttcgttcattgatggtggttcatctatttttgttcttgaaagacca
tggcatgatatttttgataatttaccacctactctgtatcaaaaaaaatttggaacataa
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