Styela clava (leathery sea squirt): 120344169
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Entry
120344169 CDS
T07291
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120344169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120344169
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120344169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
120344169
NCBI-ProteinID:
XP_039269213
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MSENNLTTVEEQERLLDNAIQIVKAESFQMKRELDKNHLMDGFKHASTMLKELRTSAMSP
KNYYELYMAVCDELRHLELHLSEEFQQGRVIADLYELVQYAGDIIPRLYLLVTVGVVYIK
AKPSSSRVILKDLVEMCKGVQHPLRGLFLRNYLLQCTKNVLPNASSEASEDDKNESTGTV
ADSIDFILTNFTEMNKLWVRMQHLGHSREREKRERERQELRILVGTNLVRLSQLEGMDAK
NYQNSVLPGILEQVVNCRDAIAQEYLMECIIQVFPDDFHLQTLRSFLTACANLHQSVNVK
TTIIALIDRLAQYASREDTSGIPKEIMLFDIFSEEVTKIIEARNQMLCEHAVSMQAALIN
LAMKCYSDRTDYVDKVLEATVEVMSQRNIEIVSSRTPLCKEVTKLLQSILDSYNNILTVL
ELKYFAPLYEHLDFDARKQFAFQLISNALENDTIVTTSEQTDTLLMLVSPLVRDQADQPK
AEEMDEQDFAEEQIVMGRFIHLLQSDDPDQQFLILNCARNQFGNGGNARLPYTLPPIVFS
CFKLAAKFKEIENEDENWDKKCNKIFQFCRATITALCKAELAELPLRLFLQGALAASEID
FSNRELVAYEFLTQAISLYEEEIADSRAQLAAVLLIVGTLEQIDCFHEESHEPLRTQCAH
AASRLLKKPDQSRAVAHVSHLFWSGKTIESGENKLNDGHRVIECLKKAVRTTNQCMETAV
QLQLFIEIFDKYIYFYEKGCTAISIEILNQLLAKIRENLPSIEETEEYDVIHMHYNNTLK
HIRDQMESGTSSYEGIDI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacaatttgacaacagttgaagagcaggaaagattgcttgataatgcaatt
caaattgtaaaagcggagagttttcagatgaaaagagagttggataaaaatcatctaatg
gatggattcaaacatgcctctaccatgttgaaagaacttcgtacgtcagctatgtctccg
aaaaattattatgaattgtacatggccgtttgtgatgaacttcgacacttagagttgcat
ctatcagaagaatttcaacagggccgagttatagctgatctgtatgaattggttcaatat
gctggagatatcattccacgactttatctccttgttacggtcggggttgtttacataaag
gcaaaaccgtcatcaagtcgtgtcattctgaaagatcttgttgaaatgtgcaaaggtgtt
caacatcccctacgcgggttatttttacgcaactaccttctgcaatgtacaaaaaatgtg
cttccgaatgcatcaagcgaagctagcgaggatgacaaaaatgaatcaaccggaacggta
gcagattcaatagatttcatcctgacaaatttcacagaaatgaacaaattatgggttcgt
atgcaacatcttggccatagtcgtgaaagagagaaacgtgagcgtgaacgacaagagtta
agaattttggttggaacaaatcttgtgaggctcagccagcttgagggaatggatgcgaag
aattatcaaaatagtgttctgcctggaattcttgagcaggttgtgaattgccgagatgcc
attgctcaggagtatttaatggaatgcatcatacaggtgtttcccgatgatttccacctt
caaacactacgcagctttctaactgcatgtgcgaatctgcatcaaagtgtcaatgtcaaa
actacaataatcgctctgattgatagactggcacaatatgcatcaagagaagatacatct
ggtattccaaaagaaatcatgctgtttgatatattttctgaagaggtgaccaagattata
gaagcacgcaatcagatgttgtgtgaacatgctgtgtcaatgcaagcagctcttattaat
cttgctatgaaatgctactctgatcgaactgattatgttgataaagtgctggaagctact
gtggaagttatgagccaacgaaacatagagatagtgtctagtcgtactccattatgcaaa
gaggttactaagttactgcagtcaattttggattcatacaataacatactaactgtgtta
gagctaaagtattttgctccgctctatgaacatcttgattttgatgctcgtaagcagttt
gcttttcaactcatctctaatgctctggaaaatgatactattgtcactacctcggagcag
acagatacattgctgatgttggtttcgccactagtgcgagaccaagctgatcaaccgaag
gctgaagagatggatgaacaggacttcgcagaagagcaaatagtgatgggaagatttatt
catctgttacaatctgatgatcctgatcaacagtttttgattcttaattgtgcacgaaat
cagtttggaaatggcggaaatgctcgactgccctataccttgccacccattgtattttca
tgcttcaaactcgcggcgaaattcaaggaaattgaaaatgaggacgaaaattgggataaa
aaatgcaataaaatatttcagttttgtcgagcaacaattactgcattatgcaaagcagag
ttagcagaacttcctctcagactttttcttcaaggtgctcttgctgcttctgaaattgac
ttcagtaatcgagaattggtagcttatgaatttctgacccaagcaatatcactgtatgaa
gaggaaattgcagacagtcgtgcccaacttgcagcagtgttacttattgttggtacattg
gagcagatagattgcttccatgaagaaagtcatgaacctctacgtacccagtgtgctcat
gcagcatccagactgctcaaaaagccagaccaaagccgcgctgtcgctcatgtttcacat
ttgttctggtctgggaaaacaattgaaagcggagaaaataagcttaatgatggccacaga
gtgatcgaatgtctaaaaaaggcagtacgtacgaccaaccaatgcatggaaacagcagtt
caattgcagctctttatcgagatttttgataaatatatctacttttatgagaaagggtgc
acagcaatatccattgaaatattgaatcagcttctggctaaaatcagagagaaccttccc
tcaattgaagaaactgaggaatatgatgtaatccacatgcattataacaatactctgaag
catattagagaccagatggaatctggaacttcatcatatgaaggtatagatatataa
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