Styela clava (leathery sea squirt): 120344245 Help Entry 120344245         CDS       T07291                                  Name (RefSeq) protein SMG7-like isoform X1   KO K14409   protein SMG7 Organism sclv  Styela clava (leathery sea squirt) Pathway sclv03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:sclv00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     120344245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sclv03019]     120344245 Messenger RNA biogenesis [BR:sclv03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      120344245    mRNA cycle factors     Common to processing body (P body) and stress granule      120344245 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EST1_DNA_bind EST1 TPR_2 Motif Other DBs NCBI-GeneID:  120344245 NCBI-ProteinID:  XP_039269296 LinkDB All DBs Position Unknown AA seq 1352 aa AA seqDB search MHVKETPLMITTSSLGDYRPYNGGDGASRLDKALFMMNNCVQLLEKAENLKKELTHTRRN GLNGDGESTSNRAALQDLYRQLLITNLEYALDKKIEQELWNIVFKNHITALQQQTKDKAN PKRTEIQNQLTVFLDASSGFYALLLQDLCHVFKINLPCRVRASKLSLLRDSDNIKRSSIT QPERPSCQYMCQHCLVHLGDIARYRNQNGQAESYYRHAAQLVPSNGQPYNQLAILAAAGG DILSTAFYYCRSLAVKCPFPGSETNLKRQLSKIIDGEEPRHQKISTSELVKFYLKFHACI YLRKYDTKLEGMVKRLLGYMRAHLRTGSLSRKQLVHMAFLNLFSLNHLLPANNLSESGGK LEGNAAQENGMADDDDSGAPWNILVSFTVRMLGALLSCVPAYSDDSEDLEHPALPATKLV LDWLCDNISVLQNTEATLYGSVWQRFAKVLNALGNQDKANNMDNRPLPEDLEVRGFVGLR QSLSKLDFIGGYESVVAEEIQHPCRCFRLYQLGLTISRSSESLLETSEESDGTVFSCSLS DDNPSETEDEELLAALEKSESIQPTKMSDSNKPPRLQKDNDSGTTSILSSGDRSSGNKKL NGEAKKDRPRSVIKVAADNTVDSKLKSIQEEDSYHHDDNARSSTASSVDSTCSSPGNHDP PTHHQKSTHHVTFAPMPTRHSASPDHVSSYKRRSPSPDLSSQRNMPSPDSEYGPVAVQYS TDPRSHHQVQSVVSHGPIHPLQAGPVPIGVYQHNYPYPGRVVQAPPHVQYPVHGITQHIP APGVAVRTAQLHSGPNPPPNPAELPKPLFPPQRMSFPPESAFAPHSISDAQSPNLIMSGN VEDPMSMYQSRTNEGSSSSLARLAQLQQQQMAHLANPATVLRMQQSRPTNLGLAARFQNQ PGIRFPPNVQQMKANQQIDAGRVKDSNLEAFLNHQRKAALQQQQQKAAAMNQYGFPDAAQ TTAEANFAAMVQQQGMNLNRNQYSGQDLSMAYQYGQAPRNIFALNMVGQPRGSSPVGSNN TSCTSSPTPGVITSNTSPQAGSLPTQRAPTVTRFQNQADAYEARAGTGASVLLSQMMAQK QGQQPYMKSPTQPKPSTLFAKERDSDIGLFHTTSDPASVPPGRTGPILPSDIFGISPSTG GMSGFSVGSIGQSPANSSPSDSFPPYPLSQERQQIFDESLDMLEGRPSTSVGHSTSISHQ RPNDNLSKATTGGQSERRRQFPGLFSKEDDEPYKLFPDTDSSWSLGRDNRNDNSLGLSNL GSIGSERAMAQQSHLPAPMGRLLWGENLTPSQGVGQQQPQRMQQPGIRGDSRFGSRDYPP FWSGPMMPSGPSALEQLIRQQQQHAGHDKTPP NT seq 4059 nt NT seq  +upstreamnt  +downstreamnt atgcacgtcaaagaaactccgttgatgataacaacaagctcacttggagactaccgtcct tacaatggaggtgatggcgcaagtcgcctggacaaagcgttatttatgatgaataattgc gtccagctgttggaaaaagctgagaatttgaagaaagagttgacacatacaagaagaaat gggttgaatggtgacggggaatcaacttctaaccgagctgcattacaggatttataccga caactacttataactaatttggaatatgctctggataaaaagattgaacaggaattatgg aacattgtgttcaaaaatcacatcacagcacttcagcaacagacaaaagacaaagcaaat cctaaaagaacagaaattcagaaccagttaacagtttttcttgatgcatctagtggtttt tatgccttattacttcaagatctttgtcatgttttcaaaatcaatttaccatgtagggtt cgagcatcaaaattgtcacttttgagagattcagacaatataaagcgcagttcaattact caaccagagagaccttcatgtcaatacatgtgccaacattgtctggttcatttgggagat atcgcacgatacaggaaccaaaatggacaggcagagtcatattatcgacatgcagcccaa ttggttcctagcaatgggcaaccatacaatcaacttgccatacttgcggcagctggaggt gatatattgagcactgctttttattattgtcgaagtcttgctgtgaaatgcccttttcct ggatccgaaactaacttgaaacgtcagcttagcaaaattattgatggtgaagaacctcga catcaaaaaatttccaccagtgaattagtcaagttttacctcaaatttcatgcttgtata tacttaagaaaatatgacacaaaacttgaaggcatggtgaagagattacttggatatatg agggcacatctgcgaactggatccttgtcgagaaaacaacttgttcacatggcttttctt aacctattttctttgaatcacctcttgccagcaaataacctttcagagtctggtggaaaa ctagagggtaatgcagcacaagagaatggtatggctgatgatgatgatagcggagctcct tggaatattcttgtatccttcactgtgcgaatgcttggtgctctactgtcttgtgttcct gcttatagtgatgacagtgaagatttggaacatcctgcattaccagctactaaacttgtt cttgactggttgtgtgataatatatcagtgttacaaaatacagaagcaactctgtatgga agtgtctggcaaagatttgcgaaagtactgaatgcacttggaaatcaagataaagccaat aatatggacaatcgaccattacctgaggatcttgaggtgcgaggttttgttggactccga caatcgctctcgaaattagattttatcggtggttatgaaagtgttgtagcagaagaaata caacatccttgtcgctgtttcaggttgtatcaacttggtttgacaatatctagatcttca gagtcattgcttgaaacatcagaagaaagtgatggaactgttttttcatgttcgttatca gatgataatccttcagaaacggaagatgaggaattattagcggcacttgaaaaatctgaa agtattcagccaaccaagatgtcagactcaaacaaaccacccagattacaaaaagataac gattctggcacaacatcgatactaagttctggtgatcggtcatctggcaacaagaaactt aatggtgaagcaaagaaagacagaccaagatcagttattaaagtcgctgctgataatacg gtggactcaaaattaaagtctatacaagaagaggattcataccatcatgatgacaatgca agaagtagcacagcatcatcagtagatagtacatgctcatcacctggaaatcatgatcct ccaacccatcaccagaaatcgacacaccatgtgacctttgctcccatgccgacccgtcat tccgcatcgcctgatcacgttagtagctacaaacgtcgttcaccaagccctgatttatct tctcaaaggaacatgccgtccccggatagtgaatatgggcccgtcgctgtacagtactct acagatccacgttcccaccatcaagtccaaagtgtggtttcacatggtccaattcaccca ctccaggcaggaccagtccctattggagtatatcagcataattacccctatcccggtcga gtcgtacaagccccacctcatgttcaataccccgttcatggcataactcaacacatccca gcaccaggtgtcgctgtcagaactgcacagctacacagtggacccaaccccccaccgaac ccagctgagttaccgaaaccgctcttccctcctcagagaatgtcattcccgccggagtct gcttttgctcctcactcaatttctgacgcacagtctccaaacctcatcatgtctggtaat gttgaagatccaatgagcatgtatcagtctcgtactaatgaaggtagctcatccagcttg gcacgtttagcccaattacaacaacaacaaatggcacatttggcaaatccagctacagta ttgagaatgcaacagtcgagaccaacaaatctcggacttgcagcaaggtttcaaaaccag ccgggaatacgttttccacccaatgtacagcagatgaaagccaatcagcagatcgatgca ggaagagtgaaagattctaatcttgaagcttttttgaatcatcaaagaaaagctgcatta caacaacaacagcaaaaagcagctgcaatgaatcaatatggatttcctgatgctgctcag acaacagcagaagctaactttgcagctatggttcaacagcaaggcatgaatctcaaccga aaccaatattctggtcaggatttatcgatggcgtaccagtacggtcaagcaccgcgaaat atttttgctctgaatatggttggccagccgcgaggatcttcgcctgtgggaagtaacaat acgtcttgcacttcgtcgcctactcctggtgtgattacatccaacacatctccgcaggca gggagtttaccaactcagcgagctcccactgttactagatttcagaatcaagctgatgcc tacgaggctcgggctggtactggagcgagtgtactgttgtcacaaatgatggcacaaaag cagggacaacagccatacatgaaatcaccaacacagccgaaaccatctactttgtttgct aaagaaagagattctgatataggcctatttcatacaacatctgatcctgcctctgttcca ccaggcaggactggtcctatcttaccttctgatatttttggaatttctccaagcacagga ggcatgtctggattttctgttggatcaattggtcaatctcctgcaaattcatcacctagt gattcgttcccaccttatcctttgtctcaagaaagacaacagatctttgatgaaagtctt gatatgttggaaggaagaccatcaacaagcgtaggtcacagtacatcaatatctcatcag cggcctaacgataatctgtccaaagcaacaacaggtggtcagtctgaacgaagaagacag tttcccggacttttttctaaagaggacgatgaaccttacaagctctttcctgatactgat tcgtcatggagtttaggaagagacaatagaaatgataacagtttggggttatcaaatctt ggaagcattggaagcgagcgtgcaatggcacaacaaagtcatttacccgctccgatgggt cgtctgttatggggtgaaaatctaaccccatcgcaaggtgttgggcaacaacagccccag agaatgcaacaaccaggtatcagaggagatagcaggtttggatcaagagattatccgccc ttctggtccggccctatgatgccttcaggaccatcagccttggagcaattgatccggcaa cagcaacaacatgccggacatgacaagaccccgccttga

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