Styela clava (leathery sea squirt): 120344256
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Entry
120344256 CDS
T07291
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120344256
Enzymes [BR:
sclv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
120344256
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120344256
Prokaryotic type
120344256
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
120344256
NCBI-ProteinID:
XP_039269311
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSCRQDSDVGITSYLNPHEGFGGIVKMRFQDFLVNEIDENDQVVHLTDVTCNLPKNEVKV
EPENTNKEEIVDILSDEGKEKLLSLVDNKEIEHVFLKGGASKDERAKIHQAIRYLHPQLE
SRTVDDSDKNEKVIKVTRATENSRGQNKKRLYPRKQLCKFVLFKRNIGTMSAISQMAKCL
HLHKANGFQYAGTKDKRAVTAQLVTAPVAPERLRGLNKLKTNIKVGNFSYCSKPLQLGSL
RGNHFTIVIRNITGSEKDIATAFESFTTNGFINYFGLQRFGTTSVPTHVVGIAILKSKWQ
EVVNLLLQPRDDETDINLNRALKEYLESGDVDAALKCLKYKSSIEGILLQGLKRFGKTQL
LQAITTIPRNMRKMYVHAYQSYIWNQVASKRVKELGFKPLAGDIVLADVYENRISSNGDK
DEPPVKKLRSERVSVEDDVNSIKCSSEDIKFLTEKDLELFKIEDVLLPLPGHDVKYPENV
VKNWYQEIMLKDDINIDIHMVHKVKDYSLPGAYRNIVTLPSRVEYDTIRYDDYTVPLLQT
DLEKLNDIEETTNVPDGKFLAMRLQFSLPSSCYATVALRELMKTDLSLSAQKKLNDDHGS
VEVETKND
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtagacaagatagtgatgtaggcattacaagttatttgaatccacatgaagga
tttggtggaatcgttaaaatgagatttcaagattttttggtaaatgaaatagatgaaaat
gatcaagttgttcatctcacggatgtcacctgcaatttaccaaaaaatgaagttaaagta
gaaccagaaaatacaaacaaagaagaaattgttgatatattatcagatgaaggcaaagag
aagcttctttctctggtagataacaaagaaattgaacatgtgtttcttaaaggcggtgcc
tcgaaagatgaacgagctaaaattcatcaagctattcgttacctccatcctcaacttgaa
agccgtactgttgatgattctgacaaaaacgaaaaagtaatcaaagtgacaagagcgacc
gaaaatagcagaggtcaaaataaaaagagactttatcctcgaaagcaactctgtaagttt
gtattattcaaacgaaacattggaactatgtctgctataagtcaaatggctaaatgtctt
catttgcacaaggcaaatggttttcagtatgctggcactaaggataaaagagctgtcaca
gcacaacttgtcactgccccagttgcacctgaaaggctacgtggattgaataaactaaaa
acaaacatcaaagttggaaatttttcgtactgttcaaagcctttgcaattaggatcatta
agaggaaaccactttactattgttataagaaacatcactggatctgaaaaagatattgca
accgcatttgagtcattcacaacaaatggttttataaattattttgggttgcagaggttt
ggcacgacatccgtcccaactcatgtggtcggaatcgcaatacttaaaagcaaatggcaa
gaagttgtcaatttattactgcagccgagagatgatgaaactgatataaatcttaataga
gcactcaaggaatatttagagtctggtgatgtagatgctgctttgaaatgcctgaagtat
aaaagctcaattgaaggtattttactccaagggcttaaaagattcgggaaaacgcaactt
ctacaagcgattactacgataccccgaaacatgagaaaaatgtatgttcatgcttatcaa
agttatatatggaatcaagttgccagtaaacgtgttaaggagcttggatttaaaccatta
gcaggagatattgttcttgccgatgtgtatgaaaacagaatttcttctaacggcgataaa
gatgagcctccagtaaagaaacttcgttctgaaagagtctctgtagaggatgacgtaaat
tcaataaaatgctcatcggaagatataaaatttctcacagaaaaagacttggaacttttc
aaaattgaagatgttttattgcccctcccaggacatgatgttaagtaccctgaaaatgtt
gtcaaaaactggtatcaagagatcatgctcaaggatgatatcaatatagatatacacatg
gtgcataaagtgaaagattattctttacctggtgcatacagaaatatagttaccctgcca
tcgcgtgtagaatatgacactattcgttatgatgactacacggtgcccctgctgcaaact
gaccttgaaaaattgaatgatattgaagagactacaaatgtgccagatgggaaattccta
gcaatgagattacaattcagccttccttcatcatgctatgctactgttgcgttacgagaa
ctcatgaaaacggatctctctttatctgcccaaaaaaaacttaacgatgatcatggaagt
gttgaagtggaaactaagaacgactga
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