Styela clava (leathery sea squirt): 120344323
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Entry
120344323 CDS
T07291
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120344323
Ion channels [BR:
sclv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120344323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120344323
NCBI-ProteinID:
XP_039269403
LinkDB
All DBs
Position
Unknown
AA seq
3175 aa
AA seq
DB search
MPSAKNGMWGVVRAAQVTRASFLGKGSYDKDAKKKNNSKPRRSVSAVFDPTTGEYYHDPY
YPYSPSTTSPRSLEAIYEEGPFDQNHNSRSRTRYSTSDLQNYTNNRFYDNPAYVSDSSTA
NRRATLSNVSDVYYAQRQTSFPQHPPAYEPNLHWNTARNKSSVSKLGQSVKSIVKKSKIA
KDFQRRSRSTGSLTSERSNQSHLGNRTGRIRMQSVGSSVMGEYDDVNHSRSSFGTLPHSG
DVFDDFAAGPHYHSNADDTEDSMSLFSLHGTARIHRDLPGNNISGSGSGYTRRTRGQAAP
SYKDILAVHEKHKMARFAEEYASKRRPGGGPGAGGGKGPGGRGAGGPYKMTLAQQARTMS
YYNPVPKQQSCITANRSLFIFSEDNFVRKLAKRIIEWPPFEYMILLTIVANCIVLALEGH
LPKGDKTPRTQKLEFTEPYFLAIFIIESALKILALGFVLHKGSYLRNGWNIMDFTVVVTG
CITYFEVVGSSTGSGFQTLRAARVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIAVLLLF
FIVVCSIIGLELYMGKFHKTCYTESNGEILRQNQICYGNATIDSGEEDSLPYRCPNGTYC
AEWDMGPYYGITTFDNIVFSMMTVFQCITMEGWTDILYFAVDGHISAFDQILDYIYFCLT
VIFGSFFMLNLVLGILSGEFAKERERVENRRAFLKLRKRQQLDRELTGYLEWMQKAEEVI
LEEEERCLERSALEAHRRRVAHNRSHTDLLDSDETSYSDISSTVGKKNRFTRSIPNSKPS
NALIRWLTRKERRLWIKVRHLVKSPIFYWVVLTLVLLNTGFTASVHYQQPEWWTNFLYYS
EFVFLGLFSTEILLKMYGLGVRTYFRSSFNIFDFAVILASIFEIIWSMIRPSMSFGLSVL
RALRLLRVFKFTRAWSGLRNLVVSLMSSLRSIMSLIFLLFLFLVVFALLGMQVFGGKFSF
PEGNPNSNFDSFPSAILTVFQILTGEDWNVVMYNGVRALGGVAGNGLLCSLYFIFLVLFG
NYTLLNVFLAIAVDNLATAQELTKDEEQEKGTKEAQKALRVAHEMESVSPGSMDNLLQRN
LTTAPQPSMWENRRREMRKHLRISDDGSLMDDSDDDVYVPGQRGGKCGKYFDVSHNSSPA
RNPDEPTSGKNSPQKAMSRDNSKSPIANHVNNCMTSPEKTNSNSNKRESPHRTKLDNTDP
EKGLLKPVSRRNSPNLSMRGCESPSPAAMAGIHGVAMSQINANTIAQLQSNVRHDEEESD
EEASDDSSEDGPKEILPSSSMFIFSSTNPIRVACHYIVNMKYFETTILVIIVLSSITLAA
EDPVNKESYRNDILNYFDIIFTAVFTFEMVIKMIDLGLVLHSGSYFHSLWNILDFVVVCS
ALVGYGLMASEDPTLDLGVIKSLRVVRVLRPLKTIKRLPKLKAVFMCVVNAFKNVATILI
VYMLFMFIFAVIAVELFNGKFYYCTDESKHFKMECKGNYIEENSDGTYAVKPREWKRRDF
HYDNVLYSFLTLFVISTGEGWPDVLWNSIESTSEDQGPIPYNRMEVSLFYIVFFIVFPFF
FVNIFVALIIITFQQEGEDAMSKCSLEKNERACVDFAISAKPLTRFMPANKSGLQYRVWK
IVVSPVFEWFIMGLIVLNTIVLMLKDRWRIQNSSQYEDGLHYSNLAFTGLFTLECLLKMM
AFGPINYFKDAWNSFDFITVLGSIADVLITLLAHMRQETESGFINLSFLRLFRAARLIKL
LRQGETIRILLWTFVQSIKALPYVCLLMVMLFFIYAIIGMQLFGNIKLDAETQINHHNNF
RDFIQSLMLLFRSATGEAWQSIMLDCVSAECDPRAGAEDKKCGNMIAYFYFTSFIFFCSF
LMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYIRVWAEYDPQATSYIKFSDMFDMLRHME
PPLGFGKNCPNRVAYRRLIQMNMPLNSEKKVNFTTTLMALIRASLQIKILPQNIDGAGKT
YRDQKVLDDQLRKEIKLAWNNLDQKKLNLLVPQENRENDVTVGKVYGALLMYEHWRAYRS
RRDGNTTALAPRNAVMQTMASADDHDGHNLRMARGASLASIVSAISAKSGRENALSYEPG
GSNLRVPGTQSEEKLDHTDNDKHSHDTVPSAYTKDDSELSVKHEENPSRLKATSPTIDET
VALLRHKQDDSKFVTMDVPAKSAVIRSPCQSTSNSMTYNFIPSPSSPRKTVTNSKDVFEM
KHDPENMSPKIKHAYPRDLQPTSTLFQAMRELSQSQLSLNQKFDGNYTLLPSTGNKNLGD
STTNTSASSVADLEVGMAQTRLAPIVSITASSPVENKYSSFSPLDDSYPDVFGDTSSESL
QIIGRHDRGRVRSHPPRRSASTSSRPHRARPLGTKRYMVVNNKKRLASNTSVINCREEDI
SEPTRAVSMPKLNEIEPQYVDLGSDRKNMKRSSSNLHIENDHVQANVNGYHRQGLVTEER
ISPVSYGELRESHSCTSSFLPQEELEVSERPLTRRSSGSETVGHRKATNVYRKPYSGRVE
PDPNQHNSQKHSVQTGRIIGSDRSASTSALIPHTDQRMHTNRMTTGSRSRNYISDDATDQ
QIYYSKYPGRHMQYRAHSPDFYQSTTSSAASTPPFSPHDQIRPNSASGYRRRFLPATPTR
PSRIVSVKRDEGNRISASASAVIPLSRLHTSSPLTHYRSASYASNNNLWKGYDAVNMLQG
RQQPESQYMDQLRAGGDYYDCAFDDATDYAASRPLISPPVPRKLPEVHSRLSPRQSGICR
RNTAPSRERPQVEIRNVFNDENLSHITSAQSHSNIGFYEYPQQEDDNAWNQREFPSSALR
NYGRHENNANSDEELHRTANRRRVTSVRRTLPTSEHTQSSSRPSSGRKTSVPEGIVYANL
NASRFQTSNEDEVDAIFRSETLRAAGTRTLPQVSPRKPIKHDITDSECNNADEDVKIPLL
SGTETTPRRHRRAGKQLQGGSRTEVTHRSWEDNLQDRGYGDDQIGTNKNANELNSHRYGN
TSKNEDFVLNNLNNNNCKKDTNARKLNGCAFGINDATKHNETGNSGIACLYNQEDGSTYY
QGTGEGGSTPSLDGVAKFDASKYKRDIFKSRTFSSTKHRRSSSSSSGHIEDSNCRIKTPK
SARELKATGPNYESASLLSLEQCVVHKNDKTDARSTTDSQSNRSSVSPRTNNTWC
NT seq
9528 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcaaagaacggtatgtggggagtcgtgagagccgctcaagtcactcgagct
tcatttctcggtaaaggaagttacgacaaggacgcgaaaaagaagaacaatagcaaacca
cgtcgatcagtgtctgcggtatttgatccaacaacgggggaatattaccatgatccttac
tatccgtatagcccttctactacaagtccaagaagcttagaggctatatacgaagaagga
ccgtttgatcaaaatcacaactctcgctcaaggacccggtatagtacctccgatcttcaa
aactatacaaataaccgtttttatgataatcccgcttacgtgagtgacagttccactgca
aacaggcgggcgacattatcaaatgtatctgacgtctattacgctcagagacagacgtct
tttccgcagcatccaccagcttatgaaccgaatcttcattggaacaccgctagaaacaaa
tcatcggtttctaaacttggacaatcagtgaagtcaattgtcaaaaagagcaaaatagca
aaagattttcagaggagatcgcgcagcaccggaagcttgacatcagaaaggtcaaatcaa
agccaccttggaaatcgaacgggccgtatcagaatgcaatcagttggatcatctgtgatg
ggagaatatgacgatgtcaaccattcacggagctcgtttggaactcttccacacagtgga
gacgtctttgacgatttcgctgccggaccacattatcacagcaacgcagacgacaccgag
gacagtatgtctctgttcagtctacatgggaccgcccggatccatagggatctacctgga
aacaatatttccggatccggttccggatatacccggcgtacaagaggacaagcagctcca
tcatataaagacattctcgctgtacacgagaagcataaaatggcgcgtttcgctgaagaa
tatgcttccaaaagacgacccggtggcggccccggagctggcggaggcaaagggcctgga
ggaagaggtgctggcggaccatacaaaatgacactggcacagcaagcccgaacaatgtca
tattataacccagtaccgaaacagcagagctgcatcacagcaaacagatcattatttatt
ttcagcgaggataacttcgtccggaagctagcgaaacgaatcatcgagtggcctcctttc
gaatacatgattctattaaccatcgtagcaaactgcatagtactggcattagaaggtcat
ttaccaaaaggagacaagactccgagaacacaaaaattggaatttacagagccttatttt
ttggcaatatttattattgaatcggcgctaaagatactggcgctgggcttcgttttgcac
aaaggttcctatctacgtaacggatggaacatcatggatttcactgtagtagtcacggga
tgcattacctattttgaggttgttggttcttcaaccggatccggttttcaaacacttagg
gcagccagagtcctgaggccgttgaaactagtatccggtataccaagtcttcaagtcgtt
ctcaaatcaatcatgaaggcgatggttccgcttctacaaatcgctgtacttttacttttc
ttcatcgttgtttgttccattattggtcttgaactttatatgggaaagttccataaaacg
tgctatactgaatctaatggtgaaatattgcgacaaaaccagatatgttatggtaacgct
accattgattctggcgaggaagactcgttaccctatcgctgcccaaacggcacttattgt
gctgagtgggacatgggtccatactatggtattacaacttttgataatatcgtattttcg
atgatgaccgtgtttcaatgtattacgatggaaggttggacagatattctctatttcgcc
gtcgacggtcatatctccgcatttgaccaaattctggattatatttacttctgtctgacg
gtgattttcggctcgttcttcatgttaaatcttgttcttggtattctgagcggcgaattc
gcgaaagaacgagaaagagtcgagaaccgaagagcatttctgaagttgagaaaaaggcaa
caactagatagagagttgacaggatatctcgaatggatgcaaaaagcagaggaagttata
ttggaagaagaagaacgttgtcttgaaagatctgcattagaagcccatcgtcggagagtt
gcacacaatcgcagtcacactgaccttttagattcagatgaaacctcttattccgatata
tcaagcactgtggggaaaaagaatcgattcacacgatccatacccaactcaaaaccttca
aacgcacttataagatggctaactcggaaagaacggagattatggataaaagttcgtcat
ctggtgaaaagtccaatattttattgggtggtgctaacattagtgcttttaaatactggt
ttcacagccagcgtccactaccagcaacctgaatggtggacaaattttttatattattcc
gaatttgtattcttgggactcttttccactgaaatccttttaaaaatgtatggtttggga
gtccgtacatacttccgctcatctttcaatattttcgattttgcggtcatcttagcttca
atattcgaaatcatttggtcaatgataaggccttcaatgtcgtttggactcagtgtactg
agagcgctgagacttcttcgcgtattcaaattcacaagggcttggtctggtctccgcaac
ctcgtggtgtcgctgatgagttcattacgatcgattatgtctcttatatttttattattt
ttgtttctcgtcgtctttgcactgctcggaatgcaagtcttcggtggcaaattcagcttt
cctgaaggaaatccgaattcaaattttgattcatttccgagtgcaattttaactgtgttt
caaatactcaccggtgaagactggaatgtagttatgtacaacggtgttcgtgccttgggt
ggtgtagctggaaatggattactgtgctcgctttattttattttcctggtgctttttggt
aattacacgcttttgaacgtattcttggctatcgcggtagacaatctagctacagcacaa
gaattaaccaaagacgaagagcaagagaaaggtacaaaagaagctcaaaaagctcttcga
gttgctcatgaaatggaatcagtcagtcctggatcgatggataatttattgcaacgaaac
ctcacaacagcaccacagccttcaatgtgggaaaatcgtcgccgggaaatgagaaaacat
ttgcgaatttccgatgacggatccctaatggacgacagcgatgatgacgtatatgttcct
gggcaacgaggaggaaaatgtggaaaatattttgacgtttctcataactcgtctccagct
cgtaatccggatgagccgacatctggaaagaattcaccacagaaagcaatgagtagagat
aacagcaaatctcctatagccaaccacgtaaacaactgcatgacttcgcccgagaaaacg
aacagcaattctaataaaagggagagtccacatcggacaaaattggacaatactgatccc
gagaaaggacttctgaaaccggtttcgcgtcgtaattcacctaatttatcaatgagaggt
tgcgagtcgccaagtccagctgccatggcgggaatacacggggtcgcaatgtctcaaatt
aacgcaaacacaatagctcagcttcaaagtaacgttagacatgacgaagaggagtccgac
gaggaagcgtcggacgacagcagtgaagacggaccgaaagaaatattaccatcaagctca
atgtttatatttagttccaccaatccgatccgagtcgcttgtcactacatcgtcaacatg
aaatatttcgagacgacaatattagttattatcgtattgagcagtatcactttggctgca
gaagatccggtcaacaaggaatcttacagaaacgacatcttaaattattttgatattatt
tttaccgctgtattcacgtttgaaatggttataaagatgatcgatttgggccttgttctc
cattctgggtcttattttcatagtttatggaacattctggattttgttgtcgtctgcagc
gctcttgttggatacggcctcatggcctcagaagacccaactctcgatttaggcgtgatt
aaatcgcttcgtgttgtgagagtattacgaccgttgaaaacaatcaaaagattaccaaaa
ctgaaggctgttttcatgtgtgttgtcaacgctttcaagaatgttgctactatattgatt
gtctacatgcttttcatgtttatattcgctgtcatcgcggttgaattgttcaacggaaaa
ttttactactgtacagatgagtcgaaacattttaaaatggagtgcaagggcaattatatt
gaagaaaattcagacggtacttatgctgttaaacccagagagtggaaaagacgagatttt
cattatgataatgtactatactcatttctcactctatttgtcatttcaactggcgaagga
tggccggatgttctgtggaactccattgagtcaacttctgaagaccaaggtcccattcct
tacaatcgaatggaagtttcactcttttacatcgtattttttatcgttttcccgtttttc
tttgtcaacatatttgtggctttaatcatcattacttttcaacaagagggagaagacgca
atgtcaaaatgttcacttgaaaagaacgagagagcctgcgtcgattttgctatttcggca
aaacctctgacgcgtttcatgcccgcaaataaaagcggattgcaatacagagtatggaag
atagtcgtttctcccgtctttgaatggtttattatggggcttattgtgctaaatacgatt
gtattgatgctcaaggatcgatggaggatacagaattcaagtcaatatgaagatggcctc
cactacagcaacttagcctttactggcctctttacactcgaatgtttgttaaagatgatg
gcgtttggccctattaattatttcaaagatgcctggaattcttttgacttcatcactgtt
cttgggagcattgctgatgttttgattactctactggcgcacatgagacaagaaacggag
tctggtttcatcaacctgagctttttgcgactgttccgagcggctcgtctcattaaactc
ctgcggcaaggtgaaacgatacggattctactgtggacatttgtacagtcaataaaggcc
ctgccttacgtctgcttgttgatggtaatgctgttcttcatatacgctatcatcggtatg
cagttatttggaaatataaaattggatgcagaaactcagataaatcatcataataacttc
agagattttatacaatctctcatgctgctatttaggtctgcaacgggagaggcctggcag
agtattatgcttgattgcgttagcgctgaatgcgatccaagggcgggagcagaagacaag
aaatgtggcaacatgatagcatatttttactttacgagttttatatttttctgctctttc
ctgatgcttaatctgtttgttgctgtaatcatggacaactttgaatacttaacgcgcgat
tcatccatacttggtcctcaccatttggacgagtacattcgtgtttgggcggagtatgac
ccacaggcaacaagctatataaagttttcggacatgtttgatatgttacgacacatggag
ccgcctctggggttcgggaaaaactgtccaaatcgcgttgcatatcgacgactgatacaa
atgaatatgcctttgaattccgaaaaaaaggttaattttacaacaacgttaatggcgctt
attagagcgtcgttgcagataaaaattcttccacagaatattgatggcgctgggaagacc
tacagagatcaaaaagtgcttgatgatcagctgagaaaagaaatcaaacttgcttggaat
aatcttgatcagaaaaaacttaacttattggtgcctcaagaaaatagagaaaatgatgtc
acagttggtaaagtctacggagcgttgctaatgtacgaacactggagagcatacaggagt
cgacgtgatggaaacacgactgcattggcgccacgcaacgccgtaatgcagacaatggcg
agcgcggacgatcacgatgggcataatttgaggatggctagaggagctagcttggcatcc
attgtgtctgcaatttctgcgaagagtggaagagagaatgcattatcttatgaaccaggt
ggaagtaatctgcgagtgccaggaactcagagcgaagaaaaactggatcataccgataac
gacaagcatagtcacgatacagtgccctcagcctatacgaaagatgacagtgaattgtct
gtcaaacatgaagaaaacccttctagactcaaagcaacatcgcctacaatagatgaaact
gtagcattgttgcgacataagcaagacgacagtaaattcgtgacaatggatgttcctgcc
aaaagtgctgttattcgtagtccgtgtcagtccaccagcaactcgatgacatataacttt
attccgtcgccgtcttcgcctcgaaaaacagtaacaaactcgaaagacgtttttgagatg
aaacatgacccagaaaatatgtctcctaaaattaaacacgcttatcccagagatcttcaa
ccaacatctacattattccaagcaatgagagaactgagtcagtcccaattatcgttgaat
caaaagtttgatggaaattacaccttactgccatctactggcaataaaaatctaggagat
agtactacgaatacatctgcctcttcagtagcagacttggaggttggaatggcccaaacc
cgcctggcacccattgtatccattactgcgtctagtccagtagaaaataaatattccagc
tttagtccactggatgattcctaccccgatgttttcggagatacttcttcggagtctttg
caaataataggccgtcacgaccgaggtcgagtgcgcagtcatccaccccgacgctcggct
tcaacgtcctcccgccctcatcgagctcggccattaggaacgaaacgatatatggtcgta
aacaataaaaaacgattagcatcgaacacaagtgttataaactgtagggaagaagacatt
tcggagccgacaagagccgtatcgatgccgaaattaaatgaaattgagcctcaatacgtc
gacttgggttcggatcgcaagaatatgaagcgctcatcgagcaatttacatatagaaaac
gaccacgttcaagctaatgtaaatggatatcacagacaagggctggttacagaagagaga
atttctcctgtttcgtacggtgaactgagggaaagccacagttgtacgtcgtcattttta
ccacaagaagagctagaggtatcggaaagaccgttgacccgtcggtcatcgggttctgaa
acagtcggccaccgcaaggcaacaaatgtatatcgtaaaccatattctggacgcgtcgaa
cctgacccaaatcaacacaattcacaaaagcattctgtgcagaccggaagaataattgga
agcgaccggtcagcctcaaccagcgccttaatcccacatacggatcagagaatgcataca
aatcgaatgacaacgggtagtcggagtcgaaattatatatccgacgatgcaacagaccaa
caaatatattacagcaagtacccggggcgacacatgcaatatcgggcgcacagtcctgac
ttttatcagtcaaccacatcgtctgcggccagtacaccaccgttctcaccccacgatcag
atcaggcctaactctgcatctggatacaggagacgatttttgccggctactccaactcgt
ccatcgaggatcgttagtgtcaaacgagacgaaggaaatagaatttcggcatctgcttcg
gctgtcataccattgtccagactccacactagcagtcctctcacgcactatcgttcggca
tcttacgcgagtaataataacttatggaaaggatatgatgctgtaaacatgctgcaaggt
cgacagcaacctgaaagtcagtatatggatcaactccgtgctggtggtgattattacgac
tgcgcttttgatgatgctactgattatgccgcatccagacctcttatatctccgcctgta
ccacggaagctacccgaagtacacagccgattaagccctagacaatccggtatatgcaga
cgaaacaccgcacctagtcgtgaaagaccacaggtagaaattagaaacgttttcaatgat
gaaaatctttctcacattacaagtgcgcagtcccatagcaacataggattttacgaatat
ccacaacaagaagatgataacgcctggaatcagagagaatttccctcctcagcgttgcgg
aattacggccgacacgaaaataacgctaacagcgatgaagaattgcacagaacggcgaac
cgacgacgagtcacatcagtgcgtcgaactctcccgacttcagagcatacgcagtcttct
tcaagaccatcaagtggccgtaagacgtctgttccggaaggaatcgtctacgcaaattta
aacgcaagtcgctttcagaccagtaacgaagatgaagttgacgcaatatttagaagcgaa
acattgcgggctgcaggaactcgtactctgccacaagtttcaccacgaaagccaataaaa
catgacataacagactcagaatgcaataatgccgacgaggatgtcaaaatcccgcttttg
tcggggactgaaaccacgcctcgccgtcacagacgagcagggaagcaactgcaaggcgga
tcacgcaccgaagtgacgcaccgatcctgggaagataatcttcaagatagaggatatggc
gatgatcagattggtacaaacaaaaatgccaatgaactcaacagtcaccgttacggcaat
acaagcaaaaatgaagattttgtcttgaataatttaaataacaacaactgtaaaaaagac
accaatgcacgaaaattaaacgggtgtgcatttggtataaacgatgccacaaagcacaat
gagactggtaattccggtatagcatgcttatataatcaagaagatggatctacatattat
caagggaccggagaaggaggttctacgccgtcattagatggcgttgcaaaatttgatgcc
tccaaatacaagcgagacattttcaagtcgaggactttcagttcgaccaagcataggcga
agtagctcttcatcaagcggacatattgaagactctaattgtagaataaaaacacccaag
tcggctcgtgaactaaaagcaacgggcccgaactatgaatccgccagccttttatcatta
gaacagtgtgttgtgcataaaaatgacaaaactgatgcacgcagcacaactgactcgcaa
agcaatcgttcctcggtatcgccaagaacaaacaatacatggtgttga
DBGET
integrated database retrieval system
