Styela clava (leathery sea squirt): 120344365
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Entry
120344365 CDS
T07291
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120344365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120344365
Spliceosome [BR:
sclv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120344365
Complex C
U4/U6.U5 tri-SnRNP related factors
120344365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
120344365
NCBI-ProteinID:
XP_039269491
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MDNAYGGDEGYDEEQDQSEYAEAKPKLGNNLPVWGNPRTMNINNLILTNIQASPYFKVKL
YELKTYHEVIDEIYYKIDNLEPWERGSRKTAGQTGMCGGVRGVGTGGIVSTSYCILYKLF
TLKLTRKQLNGMLNHTDSPYIRGLGFMYIRYCQPPKDLYSWFEPYFEDEEEIDAKAGGGC
LMTIGTMVRNLLTKLEWFDTLFPRIPVPIQKQIDEKLKARMMTQKWEARSKSQGVEDRDY
ESNRSYDQNPGRSRSQQVERTRQKSRSRSKDRKHSRRRSHDRDRDRRDYNDHKRSKRSRS
RDRERRRRSRSGSHKRSHKHRSRSRSREHKRKRSRDRDERRKEHSHRSR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcgtatggaggagatgaaggctatgacgaagagcaagatcaaagcgaatat
gcggaggcgaagccgaaattaggaaacaacttaccagtttggggtaatccacgaactatg
aacattaataacttgatattgacaaacatacaagcatcaccatacttcaaagttaaactt
tacgagcttaagacatatcatgaagttattgatgaaatttattacaagattgataatcta
gaaccttgggaaagaggaagtcgaaaaactgcaggtcaaactggaatgtgtggtggcgtt
cgaggtgtcggcactggtggaattgtctctacttcctattgtattttatataaacttttc
acactaaagttgacaagaaaacagttgaatggaatgttaaatcacactgattcaccgtac
attagaggcctcggttttatgtacatcagatactgccaaccaccaaaagatctttattca
tggttcgaaccttattttgaagatgaagaggaaattgatgcaaaagcaggaggtgggtgt
ctcatgacaattggaacaatggttcgtaatctcctgacgaagcttgaatggttcgacacg
cttttcccaagaattcctgtaccgattcaaaaacagattgatgaaaagttaaaggctaga
atgatgactcaaaaatgggaagcaagaagcaaaagtcaaggtgtagaagacagagactac
gaatcaaatagaagttatgaccaaaatccaggtcgaagccgcagtcagcaagtggagagg
accaggcaaaaatcacgatctcgttctaaagatcgtaagcattccagaagacgctcacat
gacagagatagggacagacgtgattataatgaccataaaagatcgaagcgtagtcgttca
agggatagggaaagaagacgaagaagtaggagtgggtcacataaaagaagtcataagcat
cgcagtcgatcacgctccagggaacacaagagaaaaagatccagagatcgtgatgaaaga
cgaaaagaacattcgcacaggtctagatga
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