Styela clava (leathery sea squirt): 120344443
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Entry
120344443 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120344443
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120344443
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Helicases
120344443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
120344443
NCBI-ProteinID:
XP_039269606
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MDSWGACGLSQHTLDIVRNQGFKQMTPVQTATIPLFLRNKDVAVEAVTGSGKTLAFVIPM
IEMLMRKTKTIKKAXGNDSNVFSIIISPTRELASQISEVVSDFLTGEDAGGLSHMLLIGG
RGEMTRDIESFEENGAHILVGTPGRINSAFETSKLFCSAVRSLEILILDEADRLLDLGFH
QSLSSILSHLPKQRRTGLFSATQTEETEKLIKAGLRNPVKITVKQKISTTEDACVRTPTT
LKNYYVICTAKEKFNKLMTFLKSHKSEKHIVFFSTCASVDYFGRAVKEFMKGMTEVSLIH
GKIKKKRLKIFSDFRDKKSGILICTDVMARGVDIPEVHWVLQFDPPSNASAFVHRCGRTA
RIGRKGNALIFLLENEQSYVEFMQINQKAPIFEYKEPESSVSNVEYLQKLANLSMSDRAM
MERGTRAFVSFIQSYAKHECSLIFRLKDINLGELASGFALLQLPRMPELKGRKIINFDPP
DVKISGIKYKDKAREKLRQIELKKPRNREIENKNKKKFVNNNSWSKNKERIEKKLKRREY
KRKRKLKEANEFNDKELEELEDDARLVKKLKKGKISQEEFDEKMKIDEV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacagttggggtgcatgtggtctttctcaacatacgcttgatattgtgagaaatcaa
ggattcaagcagatgactccagttcagacggcaacaattcctttatttctgaggaataaa
gatgtcgcagttgaagcagttacaggaagtggaaaaactcttgcgtttgtcattcccatg
attgaaatgttgatgaggaaaaccaaaacaataaaaaaagcatgaggtaatgattcaaat
gtattttcaatcataattagtccaactcgagaacttgcgagtcaaatttctgaagtagtt
tctgattttttgactggagaagatgccggaggtctttcacacatgttgttgatcggtgga
aggggggaaatgacgagagatattgagagttttgaagaaaatggtgcccatatattggtc
ggaacacctggcagaatcaacagtgcgtttgaaacatcaaaattattttgttccgctgtt
cgttcgttagaaatcttgatattagacgaagcggaccgattacttgatcttggtttccac
caatcactgagttctattctaagtcatttaccaaagcaaaggcgaactgggttattcagt
gctacacagacggaagaaactgaaaaactaataaaggctggattgagaaatcctgtcaaa
atcacagtcaaacagaaaatatcaactactgaagatgcctgtgttcgaacgcccactaca
ttgaaaaattattatgtcatctgcactgctaaagaaaaattcaacaaattgatgacattc
ttgaaatctcataaaagtgaaaaacacatcgtatttttttctacttgtgcatctgtggat
tattttgggagagcagtgaaagaattcatgaaaggcatgacagaagtatcattaattcat
ggaaaaatcaaaaagaaacgtttgaaaatttttagcgatttcagagataagaaaagtggg
atcctcatttgcacggatgtgatggcacgaggagttgacattccagaagttcactgggtt
ttgcagttcgatcctccgagcaatgcaagtgcttttgtgcatcgatgtggtagaacagcc
agaatcggtcgaaaaggaaatgctttgatatttttgttagaaaacgaacaatcctatgtt
gaatttatgcaaattaatcaaaaagcaccaatctttgaatacaaagaaccagaatcctca
gtttccaacgttgaatatttacaaaaattagcgaatttatcgatgtcagatcgagcaatg
atggaacgtgggacgagagcttttgtttctttcattcaatcttatgcaaaacacgaatgc
agcttaatattcagattgaaagatatcaatcttggagaactagcttctggttttgcactt
ttacaacttcctagaatgccagagttgaaaggtcgtaaaatcataaactttgaccctcca
gatgtcaagatatctggaatcaaatacaaggacaaagcgagagagaaacttcgtcaaatt
gaactcaagaagccaagaaacagagaaattgaaaataaaaacaaaaagaaatttgtgaat
aataactcttggtcaaaaaataaagaacgaattgaaaagaaacttaaaaggagagaatat
aagagaaaaaggaagttgaaagaggcaaatgaattcaatgataaagaactagaagaatta
gaagatgatgctagattggttaaaaagttaaagaaaggaaaaatttctcaggaagaattt
gatgaaaaaatgaaaatagacgaagtttga
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