Styela clava (leathery sea squirt): 120344478
Help
Entry
120344478 CDS
T07291
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120344478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120344478
03041 Spliceosome [BR:
sclv03041
]
120344478
03032 DNA replication proteins [BR:
sclv03032
]
120344478
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120344478
Spliceosome [BR:
sclv03041
]
Complex A
U1 snRNP components
Sm proteins
120344478
U2 snRNP components
120344478
Complex B
U1 snRNP components
120344478
U4/U6.U5 tri-snRNP components
120344478
Complex C
U2 snRNP components
120344478
DNA replication proteins [BR:
sclv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120344478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
120344478
NCBI-ProteinID:
XP_039269648
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MTTLPMNPKPFLNSLTGKPVIVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALSGHL
GEILIRCNNVLYIRGVEEDDEEGEMKE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcttcctatgaacccaaaaccattcttgaattcattgactgggaaacctgtc
atcgtgaaactgaaatggggaatggaatataaaggatatctcgtgtctgttgacgggtac
atgaacatgcaactagcaaacacagaagaatacgttgacggggctttatcaggacatctc
ggagaaatattgattcgttgtaataacgtactttacatccggggagtagaagaagacgat
gaagaaggagaaatgaaagaataa
DBGET
integrated database retrieval system
