Styela clava (leathery sea squirt): 120344683
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Entry
120344683 CDS
T07291
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120344683
03036 Chromosome and associated proteins [BR:
sclv03036
]
120344683
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120344683
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Helicases
120344683
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120344683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
HTH_psq
DD_DDX21-DDX50
ResIII
ERCC3_RAD25_C
HTH_Tnp_1
HTH_3
CMS1
SCO4226-like
Cas3-like_C_2
VPS38
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
120344683
NCBI-ProteinID:
XP_039269918
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MPGNIIKRKIKYTKENLEDALKAITEKKMSHREAAEHYGIPKSTLTDRISGKRSSDMMPK
RGPPTALSSEEEESLKTFLKDQVKRGLGIGKRDVFQMVKNMLDLSGKHVRYFTNNLPSDS
WWCGFLSRNPDLKMMATKKLEVVRAMACSEKKMENGTSVSLKTVKKEKKLKTKKSSEISQ
NFENEGKKKMKKAKETIKEGNSEPVKKRKKIAEISLTNDGVVQDYIETPPASDEDEKSQA
EIEGDFAKFRISDDTIELLKEKKILYLFPIQIQTFDYVFDGFDVVAQARTGTGKTMSFAL
PLVEKLQRIGVRRNSGRPPKILVMAPTRELALQVFKDFDAITTKLKCLCIYGGTPYYPQE
KAMRAGLDIVVGTPGRILDHVNKGNLHLEEIDHVILDEVDQMLDMGFAPSVEEILQYAYT
DDREKPPQTLLFSATCPPWVKKTAGKYMRTKETKHVDLIGKDSMKTATTVQHLAIRCHYT
QRAKCIGDVVQVYSGRFGRAIVFTETKRDANELALNDSVKVESQVLHGDIEQRQREITLK
AFRDGSVKCLVATNVAARGLDIPEVDLVIQINPPKDIESYIHRSGRTGRAGRLGTCICFY
KPNEEELLRRVERTAGIKFKRIGTPQPKDIIQSSYDDTLKCLDAVPEEICSKFLEQAEKV
AQKYTGGALEALSAALAHMSGATDLSSRSLLNAQEGFTTWHLKSSIVARGSGFFWNALER
CFGQDNKQKMLGMRLTQDKMGCVLDIPNNLTALIKESWRNTDKITMEQAESLPELIEQDS
RRSGGGGGGFGRGRGGWSRDGGFQNRRSFGGQGRGGGFRGRGGGFRGRGGSSRGGGGMKR
SWGGDRKYR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaaacattataaaacgtaaaataaagtacacgaaagaaaatttggaggacgct
ttaaaagccattactgaaaaaaaaatgtctcatcgcgaagcagcagagcattatggaatc
cccaaatctactttgacggatcgtatatcaggaaaaaggtcatcggatatgatgcctaaa
cgtggcccccccactgctttatcatccgaagaggaagagtcgctgaaaacatttttgaag
gaccaggttaagcgtggactcggaattggcaagagagacgtgtttcaaatggtaaaaaac
atgctggatttgtcgggaaagcacgtgcggtattttacgaataatctcccaagtgactcc
tggtggtgcggtttcttgtcgcggaacccggacctgaaaatgatggcaacgaaaaaattg
gaagtggtgcgagccatggcttgttcggaaaaaaagatggaaaatggaacctctgttagc
ctcaaaactgtgaaaaaagaaaagaaattgaaaactaaaaagtcatctgagatttcacaa
aatttcgagaatgaaggaaaaaagaaaatgaaaaaggcaaaagaaaccataaaagaggga
aattctgaaccagtcaagaagagaaagaaaattgctgaaatatcgttgactaatgatggt
gttgttcaggattatattgaaactccaccagcttcagacgaagatgaaaaaagtcaggcg
gaaattgaaggggacttcgctaaattcagaatatctgatgatacaattgaactgttgaaa
gaaaagaagattttatatcttttcccaatacaaatccaaacttttgattatgtattcgat
ggatttgatgtagtggcccaagcaagaactggaactggtaaaacgatgtcttttgcttta
ccattggttgaaaaattacaacgaattggtgttcgaagaaactcaggaagacctccaaag
attctagtcatggctccaacaagagaattagctttacaagtattcaaagattttgatgcg
ataacaacgaaattaaaatgtctatgcatctatggtggaacaccgtattatcctcaagaa
aaagcgatgcgcgccggactagatattgtcgttggtacacctggcagaatactggatcat
gttaataaaggcaatctacatctggaagaaattgatcatgtaattctagatgaagttgac
caaatgcttgatatgggttttgcaccaagtgtagaagaaatattgcaatatgcttacact
gatgatcgggagaagccaccgcagacacttctattttctgcgacctgtccgccatgggtc
aaaaagactgctggtaaatacatgagaacaaaagaaacgaagcatgttgatctcatagga
aaggattctatgaaaactgccactactgtgcaacatcttgccatcagatgtcactacacc
cagagagccaaatgcatcggtgatgtagttcaagtgtatagcggtagattcggccgtgca
attgtttttaccgaaacaaagcgagatgccaatgagcttgcattaaacgattctgtgaaa
gttgaatcacaagtattacatggagatatcgaacaaagacaaagggaaattacactaaag
gcattccgcgatggttctgtaaaatgtttagttgctacaaatgttgcagcaagaggactt
gatattcctgaagtcgatctggttattcaaataaatccacctaaggatatagaatcatac
attcatcggtcaggaagaactggtagagccggtagattgggaacctgtatttgcttctat
aaaccaaatgaagaagaattactcaggagagtagaaagaactgccggaatcaaatttaaa
agaattggtacgccacaaccaaaggatataattcaatcatcatatgacgacacattaaag
tgcttagacgcagtacctgaagaaatttgctccaaatttttagaacaagctgaaaaggtt
gcacaaaagtatacaggaggtgcattggaagcactctctgcagccttagctcacatgtct
ggtgcaacagatttgtcatcaagatcgttactgaatgctcaagagggttttacaacatgg
cacctcaagtcctctattgtagccagaggatctgggttcttctggaatgcccttgaaaga
tgttttggtcaagataataaacaaaaaatgctcggaatgagattgacccaagataaaatg
ggctgtgtgttggacattccaaacaatttgacagcgttgatcaaagaaagttggagaaac
actgataagataacgatggaacaagcggaatcattacccgaacttattgaacaagatagc
aggcgatctggtggaggtggcggcggatttggtcgcggcagaggtggctggtcacgggat
ggtggattccaaaatagaagaagctttggtggacagggacgtggtggtggttttcgcggc
cgtggtggcggttttcgtggccgtggcggttcgagtagaggaggtggtggcatgaagcgt
agttggggcggggaccgaaaatatagataa
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integrated database retrieval system
