Styela clava (leathery sea squirt): 120344969
Help
Entry
120344969 CDS
T07291
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120344969
03036 Chromosome and associated proteins [BR:
sclv03036
]
120344969
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120344969
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120344969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
Helicase_IV_N
YABBY
Motif
Other DBs
NCBI-GeneID:
120344969
NCBI-ProteinID:
XP_039270254
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSASVLDYSDIYQEIRGALHEGRLRLNNNNVVFKNIKTGKVETIPLSDIESVVWRRVARG
YELKLELTDGRSCKYDGFKEAEFEKINKHVKNNYNVTIEQQDMSAKGWNWGDTTFNGYEL
QFDVDSKRAFEIPLQNVSQCTPGKNEVSLEFHQNDDAELSLMEMRFFVPPSQNDETDTVQ
VFSDNVISKADVLQAKGNAICTFQDLQCLTPRGRYDIRMYPKFVQLHGKTFDYKITYTSI
LRLFLLPHRDQRQIFFVVSLDPPVRQGQTRYHFLVLLFYKEDEMSVEMTLSEREIEEKFG
DRLQKDMSGPIYEVVSRVMKNLVQRKITVPGSFKGPNSDQSIMCTYKASSGFLFPLERGF
MYVHKPPIHVRFDEIAFVNFARGSATSSRSFDFEIETRSQTAYVFSNIEKNCYPALFDFV
SQKKLKIKNIGKGVDGGGNIDIMANSDSEDEQHDAYLERMKQEAADRDEDDGGGDSDEGS
EEDEDFNPGAEPDEVADEYDSDVRNTSSDENDEKGSDNDEEEKKPKKKKKEKSATKRSSS
KKEGKKKKDPNAPKRPSSAYMQWLSDNRSKIKKENPELSMTEIAKHAGKLWKDVSDAEKK
SYNEKYEKDKIRYKEEMKKYEAAGGSRHISPIKKQKKSSPKGSSKTLKSPKKSQPGGFKS
KEFIQDSGSSSSDSDNDKPKAKIAKKESSPEPQASGSEEESAQESEAESTPASSEQDSD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccagcgttttggattacagtgatatttatcaagaaattcgaggcgcgttgcat
gaaggtagactccggcttaacaataataatgtcgttttcaaaaatataaaaactggaaaa
gttgaaacaattccattatccgacatagagagtgttgtgtggagaagagttgctcgggga
tatgagttgaaacttgagttgacagacggacgttcttgcaaatacgatggattcaaagag
gcggagtttgaaaagatcaataagcatgtgaaaaataattacaatgttacaattgaacaa
caggacatgtctgcgaaaggatggaactggggtgatacaacattcaatggttatgaacta
cagtttgatgttgactcaaaaagagcttttgaaattccattgcaaaatgtatcacaatgt
acaccaggaaaaaacgaagtttcattagaatttcatcagaatgatgatgcagaattatcc
cttatggaaatgaggttttttgttccgccatcacaaaacgatgaaactgatactgtgcag
gttttcagtgataatgttatatcgaaagctgatgtactgcaagcgaaaggaaatgccatt
tgtacatttcaagatttacaatgtctcacaccaagaggtagatatgacattagaatgtat
ccaaagtttgttcaacttcacggaaagacgttcgattacaaaatcacatatacttccata
ctacgactctttttacttccacacagagatcagagacaaattttctttgtggtcagtctt
gatcctcctgtcagacaaggacaaaccagatatcatttccttgttcttttattttataaa
gaagatgaaatgtctgtagaaatgactctgtctgagagagaaattgaagaaaagtttgga
gatcgattgcaaaaagatatgtcggggccaatatatgaagttgtaagtcgtgtaatgaaa
aatttagtgcaacgaaaaataactgttcctggttcattcaagggtccaaacagcgaccaa
tccatcatgtgtacttacaaagcatcgtcaggctttctatttccattggagagaggtttc
atgtatgttcataaacctccgattcatgtaagattcgatgaaattgctttcgtgaatttt
gctcgtggatcagctaccagcagcagatcatttgattttgaaattgaaacaagaagtcag
actgcttatgttttcagcaatattgaaaaaaattgttaccctgctcttttcgattttgta
agtcagaaaaaattgaagatcaaaaacattggaaagggagtggatggaggtggaaatatc
gatattatggcaaacagtgattcagaagatgaacagcatgatgcttatcttgagagaatg
aagcaagaagcagcagatcgagatgaagatgatggaggaggagacagtgatgaaggttca
gaagaagatgaagacttcaatcctggtgcagaaccagatgaggtggcagatgaatatgat
tcagatgttcggaatacaagttcagatgaaaatgatgaaaaaggttcggacaatgatgaa
gaagagaaaaaacctaagaagaaaaagaaagagaaatctgccacaaaacgaagcagcagt
aaaaaagagggtaagaagaaaaaggatccaaatgcaccaaagcgtccgtcttcagcttac
atgcagtggttatcagataacagaagtaaaataaagaaggaaaatccagaattgagcatg
actgaaattgcaaaacatgcaggaaaattatggaaagatgtttccgatgctgagaaaaag
tcctacaatgagaagtatgagaaagataagataagatataaagaagaaatgaaaaaatac
gaagctgctggaggatccagacatatttcacctataaagaaacagaagaaatcttcacca
aaaggttcgtcaaaaactttgaaatctcctaaaaagtcacaacctggtggatttaaaagc
aaagaattcatacaagacagtgggtcatcgtcatctgattctgataatgacaaaccaaaa
gccaagattgcaaagaaggaaagcagtcctgaacctcaggcgtcaggttctgaagaagag
tctgcgcaagaatcagaggcagaaagtacacctgcttcgtcagagcaggatagtgattag
DBGET
integrated database retrieval system
