Styela clava (leathery sea squirt): 120345168
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Entry
120345168 CDS
T07291
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120345168
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120345168
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRR_LRWD1
Ig_3
LRR_EndoS
LRR_R13L1-DRL21
LRR_At5g56370
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
120345168
NCBI-ProteinID:
XP_039270530
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MLENRAGRMIFCYFMLVFEYTISCPDTPTCVCERATMSVTCSRTPNLQYKLPVGIPSDTR
SLTINISTLKKIGPTAFRTTRVLSEVDLSSNKIETIAETSFQSLSRLQSLRLDNNRLKLI
PEHAFSQSNQLRRLHLSGNKILVLIPMNFHGLDNLDELYLLRNPTMCIALDAFAGLPRLR
KLEMSGMNASLDSSMFHTLPNLRILVIRNFLRVKSIPEDLLWKNEKLEKLYLEHIQLADG
ISPNLLNMSTKLRVISLRGCGLTSVPVDALEHVKDSLRELDLSHNRLKTISINDFKNLQG
LRVLNLRKTGLTYIPSNALALPHLASLDLSGNMLSTLQKSALGSKLKNVSFGNNPWICDC
GLKWLAEAHYYHEPSIPVICAEPQAMQGFEIRFLPRPVPKGEYFQCEVPKIKKIGLDPKG
SQTLLVDKNKPISFDVTCIASGYPRPLVSWIILSRDAKPATRKRSLPENIATHVFDQNTR
LKRSMDSESKQMCTVCEVGSQHTENNIWVSLNGTLHVRDLVGTDATGIYTCQAANSQGIR
RDSIVLEEHTEETLKLQDKTKLPEPSGFTASNKGMVIGTPFPLDMEDDFGGMAFGEDDYT
YYSNWRGENIQTHSSWRTIDNPNSYQQPEVQPYGDYRHSDVGNPLPLMAPSRPREKTVKR
EVPLSPEIKYCRTQRCSVRNVEQKVEAALGEEYLRDAEAGNGINSPYLELSPGADLADTL
TRSQTSCCGDNSANGLHLPALLMTLCSLAFSILYSDIVL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaatcgtgcgggtcggatgatattttgctactttatgttggtttttgaatac
acaatttcgtgtccggatactccaacatgcgtctgcgaaagagcaacaatgtctgttact
tgctctcggacaccgaacttgcagtacaaattaccggttgggattccatccgataccaga
tcattaactatcaacatttcaacactaaagaaaattggacctacggctttcagaactaca
cgagtattatcagaagttgatctgagttctaacaaaatcgaaaccatcgcggagacgtcg
tttcaaagtctttcccgattacaaagtcttcgactggataacaacagactaaaattaata
ccagaacatgctttttcacaatcgaatcagctgcgacgactccatctgagtggaaataaa
atactcgtattgattcccatgaatttccacggacttgacaacttggacgaactatatctt
ctacgaaatcccacaatgtgcattgcattggatgcttttgctggtcttccgcgtctccgt
aaactagagatgtcaggaatgaacgcatctttggattccagcatgtttcacacgctacca
aacttgagaattctcgtgattcgaaattttctccgagtaaagtcaatacctgaagattta
ttgtggaaaaatgaaaaacttgaaaaactatatttggagcatattcaacttgcagatggc
ataagcccaaatcttttgaatatgtcaacaaaattaagagtgatttctttgcgaggttgc
ggtttaacatctgtaccggttgatgcactggaacacgtcaaagacagcttaagagaactt
gatttatctcataatcgtctgaagacaatttcaataaacgatttcaagaatttgcaagga
cttcgggttttgaatctccggaagacaggtcttacatacataccttctaatgctctcgca
ttacctcaccttgcatctctcgatctctctggaaatatgttgtcgactctacagaaatca
gctctgggatctaaattgaaaaatgtaagcttcggtaacaatccatggatttgtgattgt
gggctgaaatggttggccgaagctcattactatcacgagccttcaataccggtcatctgt
gcagaaccacaagcaatgcaaggatttgagattcgttttttaccccgacctgtgcccaaa
ggagaatattttcaatgtgaggttccaaagatcaaaaaaattggattagatcccaaaggt
tctcaaacacttctagtcgataaaaacaaacctatatcatttgacgtgacatgtattgcc
agtggatatccacgacctctcgtttcttggatcatattatcccgcgacgcaaagccagcc
acgcgaaaacgtagtttgcctgaaaatatcgctacccatgtattcgatcaaaatactcgg
cttaaaagatcaatggattcagaaagcaaacaaatgtgtacagtgtgtgaagttggatct
caacacaccgagaacaatatctgggtatccctaaatggaactctccacgtccgagattta
gtaggtactgatgctacaggtatttatacttgtcaagcagccaattcgcaaggaattcgt
agagattcgatagtgttagaagagcacaccgaggaaacgttaaaattacaagataagacg
aaattgcccgagcccagtgggtttactgcttcgaacaaggggatggttatcggtacacct
tttccactggacatggaagatgactttggaggcatggcatttggtgaagacgattacaca
tactactctaactggaggggtgaaaatattcaaacacattcaagctggcgcactattgac
aacccaaactcatatcagcaacctgaagtgcagccttacggtgactacagacactcagac
gtaggaaatcctttaccacttatggcgccttcacggccaagagaaaaaacagttaaacgt
gaagtcccgttgtcaccagaaatcaagtattgccgtactcaacgctgtagtgttcgcaac
gttgaacaaaaagttgaagctgccttaggtgaagaataccttagagatgctgaagccgga
aatggcattaattcgccttatttggaactttcacctggagccgatcttgcagatactttg
actcgaagtcaaacttcttgttgtggagacaattctgcgaatggattacatctaccagca
ttgttgatgacattgtgctcacttgcattttcaatattatattctgatatcgttttatag
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