KEGG   Styela clava (leathery sea squirt): 120345189
Entry
120345189         CDS       T07291                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03030  DNA replication
sclv03410  Base excision repair
sclv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120345189
   03410 Base excision repair
    120345189
   03420 Nucleotide excision repair
    120345189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sclv03032]
    120345189
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120345189
Enzymes [BR:sclv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     120345189
DNA replication proteins [BR:sclv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    120345189
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      120345189
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 120345189
NCBI-ProteinID: XP_039270554
LinkDB
Position
Unknown
AA seq 2279 aa
MPLQNTGKLVKEKDWSKNEDGAAKRLEQAKLSEEMDERYGYKKLSVPCEKLGWLINMCEA
DILDEDKKMISAVDFYFLQDDGERFKVSVPFKPYFYVLTKRGTEKEVISFLQRKFPKIFS
IEIKKKEDLDLQNHLVGLKQTYLKLSFMHVDDLSSVRQIIQRAVNRNKQREKGHSAYVEM
LTSTLAGEKVSETSSDRSKTLVDQLDNLLDIREHDVTYYVRVSIDLKIHVGLWYSVQFKG
SSIPPVITKRNDLLERPDPVVLAYDIETTKLPLKFPDPDTDCIMMISYMIDGQGYLICNR
EIISADVEDFEFTPKPEYEGKFEVFNEPDEISTLHRFFDHILDVKPHLFVTYNGDFFDWP
FVEARALKHGIEMIKEIGFSKDSQGEYKCRQASHMDAFKWVKRDSYLPMGSQSLKAAAKA
KLRYDPVELDPEDMCRLASEEPQTMANYSVSDAVATYYLYMKYVHPFIFALCTIIPMDPD
SVLRKGSGTLCEALLMVQAFDVNIIFPNRQESTLNKQTNDGHVLDSETYVGGHVEAIESG
VFRADIPCRFLGDPGGYNFLHGEVEKTIKFCIEVEENIPLSEVTNYEEVCRDIKSKLIDL
RDNPARIENPIIYHLDVGAMYPNIILTNRLQPSAMVDDETCAACDFNKPGATCQRSMPWM
WRGEYMPATRSEFHRIQQQLETEKFPSFFPGGKPRAFHELNKIERAEQEKKRLQEYCRIA
YKKTKISRIEERYTTICQRENSFYVDTVRMFRDRRYEFKAALKKAKKQVSDAVASGDASE
IKAAKGLEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGASIITKAREIV
EKIGRPLELDTDGIWCVLPASFPENYVIHTTNPKKPKVTISYPGAMLNVMVKDEYTNHQY
QELTDPATLTYTQQSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKG
FEVKRRGELQLIKIFQSSVFEAFLRGGTLEEVYASVAKVADYWLDVLYSKADNMPDSELF
DLITENRSMSKKLEEYGAQKSTSISTAKRLAEFLGDQMVKDSGLSCRFIISKKPEGAPVT
ERAIPLAIFQSEQSVKRHYLRRWTKTSNLTDFDIRSILDWGYYIERLGNTIQKIITIPAA
LQGVPNPVPRVRHPDWLHKRLMEKNDVFKQKRITDMFSVLPKKRPRSEDGSDSGQSDGNK
ENGMDIEDFGKKTNEKKGIQATVSAKKRKIDQENEDLKKSWRELLGPAPSNEFLLKGTKS
QHQEWIDYHKKKWKHQANQRKASLKMSDTLIESQRNTRQPTSGLTGFMRQHTQTLLNSTW
QIVQMVPTDHPGQFRVFTLIGNTLHTLKLNVPRVFYVNQRTLKEGKSEIWRKVNRLLPRS
SPLLNLYEYQIPESEYQKHRHAIRLELSGSHIEGVYELQVPLDFRALVNLGSMCSVKRSE
VKKLHDTDTFEMDQLEMRTSNVEYLEKDSMKQIYLYQHVSGAKQMVGLFLPTTKKCFIFV
VDTVRTNAMPNMQSLYKSEHAAILSSAQDMELPPTDYTFEIRIEKDVKNMYSALQRHIST
YKNEHHGPTLIAFQSQLSVTKISSLIPAVREFPIIPLHNKDPENLYAVLEWQRVGARRLV
QQFLNLGTLLDQLLKYSRYFCVPVGNLPLDPSLFVADLTFARYLLKHNHVLWCSATEKPD
LGGKEAFDNKLGTDNSNSTVEVNTSGAYPSVCIELEISSLAVNTIIQSHRVNDVDGGVSA
GVSFDVIQQSSLEDMISGQNSALNSLASDDDTVLCSTTFRILKSMVQGWLRDVSVHRNEL
ADFQLVHFYRWLGCRSSLLFDRALHKTLQNMMRKVFLQLISEFKRLGSKIVYADFSRVIV
CTKKRSVTDAVAYISYIASSITSKDLYHSIDLSIVQAWEYLLWLDHTNFAGVKGQMEENE
DKMDDSSISVSSKKDNSDNSTEPQNKSIRFDESLINESGEENPTQGGDVVEMNFSLVKYL
PHAAAIQTSFEMIIGGYISMIHRETKLERTKYLPGQTPVVRRGDTQSQEEKGGKSKIIPS
DPSITEHIVTFSQELITGELTQQILSIVQKMAKKLGSDPVSGSKMFPILPGSHLSLTNPT
LEFVKSACKVLLLDSHVSTQVQHLKRNLLKLIGVGEFSSSAEWNDPCASFVLGEVVCVTC
NHCRDLDLCREYQTLDGQEKIVWMCESCGTAYDISWIENRLIESLQSQAASHVLQDLSCK
KCNGIKQGNLSRYCECAGDFEVTIPVSKFTNTIKIFQNIAEHAGMPLLLETVKWFSEYM
NT seq 6840 nt   +upstreamnt  +downstreamnt
atgccgctacaaaacaccggaaaattagtgaaggagaaagactggtctaaaaacgaagat
ggtgcggcaaaaagactggaacaagcgaaattatctgaagagatggacgagagatacggc
tataagaaattatctgttccgtgtgagaagctggggtggctgataaacatgtgtgaagca
gatatcttggatgaagataagaaaatgatcagtgcagtggatttctatttcttacaggat
gacggtgaacgattcaaagtatctgttcctttcaagccatatttttacgttttgacaaaa
cgtgggacagaaaaagaagtcatttcatttctgcagcgaaaattcccgaaaattttttcc
atcgaaattaagaaaaaagaagatttggatctacagaatcatttagttggattaaaacaa
acttatttaaaattatcattcatgcacgtcgacgatttatcaagcgtgaggcaaattatc
caacgggcggtgaaccgtaacaaacagcgagaaaaaggacattctgcgtatgttgaaatg
cttactagcacactcgctggagaaaaagtgtccgaaacttcaagtgatagatctaaaacg
ctggttgaccagttggataacttacttgacatacgcgaacatgacgttacttactatgtt
cgagtttcaattgatttgaaaatccacgttggtctgtggtactccgttcaatttaaagga
agctctattccacccgtgataaccaaacgaaacgatttattagagcgaccagacccggtt
gtattagcgtacgatattgaaacgacgaaattgccgttaaaattccctgatcctgatact
gactgtattatgatgatttcttatatgatagacggacaaggatatttgatctgtaaccga
gaaataatctctgccgacgtagaggactttgaattcacacccaaaccagaatatgagggg
aaattcgaagtttttaatgaacctgacgagatttcaacgttgcatcgttttttcgatcat
attttagacgttaagccacatttatttgtgacatataatggggatttctttgactggcca
ttcgtggaagcgcgggctctaaagcacggaattgaaatgataaaagagattggattcagt
aaagactctcaaggagagtataaatgccgccaagcgtcacacatggacgcttttaaatgg
gtaaaaagagacagttatttaccgatgggatcacaaagtctaaaagcggcagcaaaagcg
aaacttcgttacgacccagtagaattagacccagaagatatgtgtcgcttagcgagcgaa
gaaccacaaacaatggctaattattcagtgtcggacgcagttgcaacttactacctttac
atgaagtatgttcatccttttatatttgcgctttgtactattatccctatggatccggac
tctgtgctgcgaaaaggatctggaactttatgtgaagctcttctcatggttcaggcattt
gatgtgaatattatattcccaaacagacaagagtcaacgttgaacaaacagacaaacgac
ggacatgtgttggactcggaaacgtatgttgggggtcatgtcgaagctattgaaagtggg
gtctttcgagctgatatcccttgtcgctttttaggcgacccaggggggtataattttcta
catggggaggttgaaaaaactataaaattttgcatcgaagtcgaagaaaatattccgtta
tccgaagttacgaattatgaagaagtttgtcgggatattaaatcaaaattaattgatttg
cgggacaatcccgctagaattgagaacccgatcatttaccatctcgacgttggagctatg
tatccgaatatcattctaacgaatcgtttacagccttcagcgatggttgacgatgaaacc
tgtgcggcttgtgatttcaacaaacctggtgctacatgccaacgttccatgccatggatg
tggcgtggggaatatatgcccgccactaggagtgaatttcatcgcattcaacaacaatta
gaaactgaaaaatttccgtcattttttcccggtgggaaacctcgagctttccatgaatta
aataaaattgagagagcagaacaagagaaaaaacgtcttcaggaatactgtcgaatcgct
tacaagaaaaccaaaatcagccgaattgaagagcgctacactacgatttgccagcgtgag
aattcattttacgtcgacactgtacgtatgtttcgtgatcgtcgttatgagtttaaagcc
gcgctgaaaaaagcgaaaaagcaagttagtgatgctgtagcaagcggagacgcttcggaa
ataaaagccgcaaaagggcttgaggttttatacgattccttacaacttgctcacaaatgt
attttgaattcattttatgggtatgtaatgcgaaaaggggcacgatggtactcaatggaa
atggctggcattgtctgctataccggtgcaagcattatcacaaaagctagagaaatcgtt
gaaaaaattggacgacctcttgagttggacacagacggtatttggtgcgttctaccagcc
agttttcctgagaattatgttatacatacaacgaacccaaaaaagcctaaagttacaatc
tcttaccctggagctatgctaaacgttatggtgaaagatgaatacacaaatcaccagtat
caagaacttactgatcctgcgacattgacatacacacaacaaagcgaaaattcaatattt
ttcgaagtcgatggaccgtatcttgccatgattctgccagcttctaaagaagaaggaaaa
aaattgaaaaaacgttatgctgtttttaattttgacggatctttagcagaattgaaaggt
ttcgaagttaaacgcaggggggaactgcaattaatcaaaatttttcagtcctcggttttt
gaggcttttttacgtgggggaacactcgaggaggtttatgcttcagtggctaaagttgca
gattactggctcgacgtgctgtacagtaaagcagacaatatgccagattccgaacttttc
gatttaatcacggaaaaccggtctatgtcgaaaaaactcgaggaatatggagcgcaaaaa
tcgacctcaatcagtacagcaaaaagacttgcggagtttctcggagatcagatggtgaaa
gattcaggtctgtcgtgtcgttttattatttcgaagaaaccagaaggcgcaccagtcacg
gaacgggcgatcccgcttgcaatttttcagtcggaacaaagtgtgaagcgacactacctt
cgccgctggacgaaaacttcaaatttgactgattttgatattcgtagcattttagactgg
gggtattatatagaacggctcggaaacacgatacaaaaaattatcacgattcctgcggct
ttacagggggttccgaaccccgttccgagagtgcgtcatcccgattggctacataaacga
ttgatggaaaaaaacgacgttttcaaacaaaaacgaatcactgatatgttttctgttttg
ccgaaaaaacggccaagaagcgaagacggctctgattcaggtcaatcagacggaaacaaa
gagaatgggatggatatagaggattttgggaagaaaacgaatgaaaagaaaggaatccaa
gctactgtttccgctaaaaaaagaaaaattgatcaagaaaatgaagatcttaaaaaatca
tggagggaattattaggacctgcaccaagtaacgagtttttattgaaaggaacgaaaagc
cagcaccaggagtggatagactaccataaaaagaagtggaaacaccaagcaaaccagcgg
aaagcaagtttaaaaatgagtgacacattaattgagtcacaacgtaacactcggcaacca
acatcaggtcttactggttttatgcggcaacatactcaaactttacttaattcgacatgg
cagatagtgcaaatggtacccacagaccatcctggccagtttcgtgtgtttaccctcatt
ggtaacactttacatacattaaaattaaacgtaccgagagttttttatgtgaaccaacga
acgttgaaggaaggaaaaagcgagatttggcgaaaagtcaaccgcttgctaccaagatca
tcacctctgttaaatttgtatgaatatcaaatcccagagtcggagtatcaaaaacaccga
cacgcgattcgtctcgaactttcaggttctcatattgagggcgtttacgagctacaagtg
ccgcttgatttcagagcgcttgtaaatttagggtccatgtgttctgtgaaacgtagcgaa
gtcaaaaaacttcacgatacggatacatttgaaatggaccaattagaaatgagaactagc
aatgttgagtacctagagaaagactctatgaaacaaatttatctttatcagcacgtttct
ggcgctaaacaaatggtcgggttatttttaccgacgacaaaaaagtgttttatatttgtt
gttgacacagtacgtacaaatgcaatgccaaacatgcaatcgttgtacaagtcagaacat
gctgcaattttatcgtcagcacaagacatggaattacccccgactgattatacattcgag
atcaggattgaaaaggacgttaaaaatatgtactcagcgctgcaacggcatatttcaacg
tacaaaaacgagcaccatgggccaactttaattgcatttcagtctcaactttctgttact
aaaatatcgagtcttataccagccgtgagagaatttcccataattccattgcataataaa
gaccccgagaatttatatgcagttttggaatggcaacgtgttggagcacggcgattggtt
caacaatttttaaacctgggtactctattggaccagttactaaaatatagccgatatttt
tgcgttcccgtcggtaatctgccactggacccaagcctgtttgtagcggatttaactttc
gcaagatatttactgaagcataaccatgtcctgtggtgttctgcgacagaaaaaccagat
ctaggaggaaaggaagcgttcgacaataagttaggaacggataattcgaatagtacagtt
gaggtgaacaccagtggagcgtatcccagcgtttgtatcgaattagaaatctcgtcttta
gctgtgaacacgattatccaatcacatcgcgttaatgatgtcgacgggggcgtgagtgca
ggcgtgagtttcgacgtaattcaacaatcttcgctcgaagatatgataagcggacagaat
tctgcgttgaattcgcttgctagtgatgacgatactgttttgtgttcaactacattcagg
atcttaaagtcaatggtacaaggttggcttcgggacgtgtctgtacatcgaaacgagctt
gctgatttccaacttgtgcatttctatcgatggttgggttgtcgttcttctctacttttc
gaccgtgcgttgcataaaactctacaaaacatgatgcgtaaagtttttttgcagttgatc
tctgagtttaagcgattgggatctaaaatcgtgtacgcagattttagccgagtcattgtt
tgcacaaagaaacgctctgtcacagatgcagtggcgtatatcagctacatagcatcgtct
atcacatctaaagatttataccattccatagatctttctatcgtgcaagcttgggagtac
ttactatggcttgaccacactaattttgccggggttaaaggtcaaatggaagaaaacgag
gacaaaatggacgatagttcgatcagcgttagcagtaaaaaagataattccgataattca
acggagccgcagaataaatctatccgcttcgacgaaagtttgataaatgaaagtggggaa
gaaaatccaacacaaggtggcgatgttgttgaaatgaattttagtctcgtaaaatatctc
cctcatgctgccgcaattcagactagctttgaaatgattattggggggtacatttcaatg
atccatcgcgaaacaaaacttgaaagaacaaaatacctccctggacagactcctgttgtt
cgaaggggggacacgcagtcgcaagaagaaaaagggggaaaatcaaaaatcattccaagc
gacccttccattacggaacatattgtgactttctcacaggagttaataacaggagaacta
actcaacaaattctgagtatcgtccaaaaaatggcgaaaaaattaggctcggacccagta
agtggaagcaaaatgttccctattttacctgggtctcatctttctctcacaaatccgacg
ttggaattcgttaaatcggcgtgcaaagttttgttgctcgattctcacgtatcgacgcaa
gttcaacatctgaagcggaatttattaaaacttatcggagtcggagaattttcgtcgtct
gcagaatggaacgatccgtgtgcttcgtttgttttgggtgaagtcgtttgtgttacgtgc
aaccactgtcgtgatttagatttatgtcgtgaataccagacactagatggccaagaaaaa
attgtgtggatgtgcgagtcttgcggaacagcgtacgatatttcatggatcgagaatcga
cttattgaaagtttgcaaagccaagcagcaagtcacgttttgcaggatctatcgtgcaaa
aaatgtaatggaataaaacaaggaaatttatcgagatattgcgaatgtgccggagatttt
gaagtaacgataccggtgtcgaagttcacaaatacaatcaaaatatttcagaatattgcc
gagcacgcaggaatgcctttgttactagaaactgtgaaatggttttctgagtacatgtga

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