Styela clava (leathery sea squirt): 120345326
Help
Entry
120345326 CDS
T07291
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sclv00535
]
120345326
04091 Lectins [BR:
sclv04091
]
120345326
Proteoglycans [BR:
sclv00535
]
Cell surface proteoglycans
Others
120345326
Lectins [BR:
sclv04091
]
C-Type lectins
Others
120345326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120345326
NCBI-ProteinID:
XP_039270667
LinkDB
All DBs
Position
Unknown
AA seq
2669 aa
AA seq
DB search
MRTSYLLVVCLLCHIKISGAYLASFHGDSFLFQSLNSRPLDTTTVSLRFQTSSADGLLFL
ALGQSQYLIVELVNGKLEVKIDLGYGEEVLSTSDRDSLNNLIWHQFKVVRSGSNIKLVLN
GRDVTSGQINVPNPRRAKLATDFGIFLGGLGGNITLPNGGRPGKYFRGCLLEAEFNGKDL
LTPLKNVGNERILYHVVSGCPKIFRASRSESITFDSPSSYVALNRWTVQDEGTFECMLKT
SARSGIILYNAGRGRGEFIGLEMVDGVVGASVNKGGGGGVVALHTTSPINDGAWHSVRFS
FSPSYLDIRVDGKRTKAFVEQTSPELKGTVIGERHHNLDLTGHLYIGGVPGNLLQNDAVP
HSLVSLGSSDGTGTVSGAFPGCMKNLRVNHRRKGFSDFLLSRHVSAGCKKIVNFDRSKKN
TPIDDFNEANSAVSTMFAIYNSKKSKSRLSTTARTTTTTIPTTTTPAFVVPVVNLTIHPL
MVLEGQSSKLTSEQLSLSVQGFEKQDTKEDILFVISNPPSHGFLLNSQDCSSLATLFEFS
AIDLADEKLYFCHDASETTHDYINFTVVWNLEHKSLNERKHIIRNFPGKPEFVSTGIVLN
DRAVFSLNIIVEPVNDPPTLHIPVQYLFRPVKSTSTHLPQDILNATDPDSPPSEIIYTIL
GNQRGGFHIENEKNLGKSIIEFSQEDINSGNIVFVDEGEVENARLVMRVSNTLSQSTSTA
VLRIATISLNISVTTREITLLEKSSFIFTIEQLAVTSNAEPGSVNLLFQIKENPSLGEMQ
TFNHEIGDDNLREESWIRSSNFTEKQLSEGYVRYHNLKTSSSVVEDTEKDRFTFTVSGAN
VETPVITCVINVQKVRVILSINKLLLTDGIQEKKLTADFLQVNITHVHVSNNQIQIRLEN
PIQHAELFYNDNGLAISNGDAFTLEELKTGRISIKVKPKHASRAFNEMIPFVAVIKKLYH
SDKIRLNVTYVPDLDRILLVNKGLQLQEGQKQVINVRFLKVSLPPSQINDNVDRFRFNIT
RNPQHGILGRVKDESKVVIDTEEASDSITEFTMQDIIDQKIYYKHDDSENESDYFSFRVV
PILDGELPKTIAKLSNVHLDGNFTISIQLVNDQRPVRVISQPFQVVRNGERLLTKDDLWY
TDADTNFSDLDLVYTRRGIADGDILNATSRRHEKIFKFTQRQIVNGEVLLKHEGNDFGRF
VFWVRDGKHYATGLFVISASDPFVRIVNSSELTVIKGREIAITSENLWCSTNVKGLKKDI
TYRITKAPSNGLLYLNNSSEDVQPISIKSFTQQDIFDEIVVYEHSGSPVMEDSIDFQVSA
GEISKHGNIAIKAVLESHQKPPTVQKNRTIVVDQGQKVQIRKQDLRIVHLDTRAADIVFF
IKQSPKFGNLEFLTNVDSDEFNTDPLKEFTQSDINKGLVWYSQNTSFVYSDNDFINGVLL
DYFTFDVSNKILSLDNLRFYFDIVPYIIPLKTNNFSVPEGRTKAIIREYLYIEGIHFDEA
TVEIRVTKPPEHGILESTQQIGIALKSFSYRLATAEFLYYSHDGSDFLQDSFSLQAFTID
GKKQSNIVASYVTIIPENDEQPVVVNNTGMTVWTNSITKLSSIVLGVEDPDTGPGDITYR
ILPPSNGWIACNNDPSKSVLEFTQEQVNNGSIVFVHKGSTTGGITFQVDDGENYANKHIF
VITAKPLIIAVENNKGIQSFPGTSIDITSDVLRSTTNDMETTDRIITYKIIFRPKYGKIV
KLTNHTSTENETLEEFTQQDIDDKQVFFKQDIEVEKWSAIDSFVVTVLSPPADNITDVKI
PINITYDAFEIVGKKSPISVNEGCTLIEGEKIQITTDILDASNLYKKLPLHRDRSLYGLF
YSLVGLPIHGNISISGENVTKPNTSFTQTNLIKNEVFYLHDHSDHIEDSFNFNIFLVDKR
YTASTGKPWIVPGTFFQDIFNISITPVNDNPPKLLTKGKVLEVVDGFDTLVLPEVLNAVD
PDNSPEEVTYSIIRPPSRGHIAFVNESLTKITKFTQFDVNEGKVVFVPKKINMTESQLND
ALYFSVTDGIQRPAYNLFQIKIVPVHLRLNPSQISIVQAFYSADVTSNILNVSTNGNLSL
VSFHVTKLPESGMILINENQNSSFSYEDVSKNKVTFAMTKNSLSTDSMEINVHYNRSIGS
NMSVTATLQIMVTPLLVQGSLSVSNDGLSRLALSSLNTTPLLDKSNSMPRFEVIRQPENG
EILKVFSPEETSKSVRKREISGEYSHLLKEVDKFSHEDIALGRVFIYVDNLNVTDGKLED
SISLRLTVEDNSAQPAEFTFDFDIVEKEAEDYSSFFEQFLVKEELTTIADADMDDSVDST
TSSIISGSSLPVSPSEKNIENVDKDVVDDPKISTEDNNPMDPKDVMAENPQPAEDETSLP
WLIPVAVVLGLLLIMALCLTVVFLRHKHWFKGKSYRTKNDQASEENHSLTSRDDILEQNN
LNPTMNYNQTNISRHPEGESLRSPACPGVTVTLLRSGPGSVQPSNYGEDRHSFTVMGSTL
GPQSYRDDVPSTIYTPSTVYHYDDTGSVDFPDNAEAEFYAANHNIYPNQRLYHSRSARFI
DPDVLALYSSDESIPSMIDEKYAIPYRGSTGATGSVPAELHRAVSQPGTSYAGIADCRPR
STASLSKAAVTPELSLLPNSGLESNQYWI
NT seq
8010 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaagttatctacttgtagtgtgtttgctgtgtcatattaagatttcaggagcc
tatttagcttcatttcatggagacagttttcttttccaatctctgaattctcggcctctt
gatacgacaaccgtttcgctaagatttcaaaccagctcggcggatggattactttttctg
gcacttgggcaatcccaatatctcattgttgaattagtcaatggtaaattagaggtcaaa
atagatcttggatatggggaagaggtactatcaacatctgacagagattccttaaataat
ttgatttggcatcagttcaaagttgtcagatctggcagcaatatcaaactagtacttaat
ggacgagatgtgacgtctggacaaattaatgtgccgaatcccaggagggcaaaacttgct
acagacttcggaatatttcttggtggcttaggtggaaatataacattacctaatggagga
aggccgggaaaatattttcgtggttgtttattggaagccgagttcaacggaaaggaccta
ctaacgccgctgaaaaatgttggaaatgaaaggatcttatatcatgttgtttcggggtgt
cctaagatcttcagagcaagtcgatctgaatcaataacttttgactcgccatcatcttat
gttgccttgaatcgttggactgtacaagatgaagggacatttgaatgcatgttaaaaaca
tccgcacgaagtggtattattttatataatgctggtcgtggaagaggtgaattcattggg
cttgaaatggttgatggagttgttggtgcttcggtgaataaaggtggtgggggcggcgtt
gttgctttacatacaacatcacctatcaatgacggagcatggcactctgttagatttagt
ttcagtccatcctacttagacataagagttgatgggaaacgcacaaaggcatttgttgag
caaacatcaccagaattaaaaggaactgtaataggagaaagacaccataatcttgatttg
actggacatttgtatattggaggggtacctggaaatttattgcaaaatgatgctgtgcca
cacagccttgtttcattaggcagcagtgatggaacaggaacagtcagtggtgcgtttcca
ggatgcatgaagaatttgagagttaatcacaggagaaaaggtttttcagattttttatta
tcgaggcatgtttccgctggatgcaagaaaattgtaaattttgatcgatcgaaaaaaaat
acgcccattgatgattttaatgaagctaactcagctgtatcaacaatgtttgcaatctac
aattccaagaaatccaaatcaaggttatcaacaacagctaggaccactacaaccactata
ccaaccacaaccactccagcatttgttgtacctgtggtcaatttaacaattcatcctttg
atggttttggagggtcaaagttcaaagctcaccagtgaacaactgtcattgtcagtccaa
ggatttgaaaaacaagacactaaggaagatattttgtttgtaatttcaaatcctccttcc
catggttttctattaaactctcaagattgttcatcactggcaacactatttgaattttcc
gccatagatctagcggacgaaaaactctacttttgtcatgatgcttcagaaactactcat
gattatatcaattttaccgtagtttggaacttggaacataaaagcttaaatgaacgcaaa
catatcataagaaatttcccagggaaacctgaatttgtcagcactggaatagttcttaat
gatagagctgttttttctttgaacataattgttgaaccagttaacgacccaccaacatta
cacatccctgtacaatatctatttcgtccagttaaaagcacgtccacgcatctacctcaa
gatatcttaaatgcaactgatcctgacagccctccttctgaaataatttacacgatattg
ggaaatcagagaggtggttttcatattgaaaatgagaaaaatttagggaaatcaataata
gaattctctcaggaagatatcaactcaggaaatatagtgtttgtggatgaaggagaagtt
gaaaatgcaaggcttgttatgagagtctcaaacactctttctcaatctacctcaactgct
gtgttgagaattgcaactatttcgttgaatatttcagtgacaacaagagaaattacactt
ttggagaaaagcagtttcatattcacaattgaacaactagctgtaacatcaaatgcagaa
cctggttctgtaaatcttctttttcaaataaaggaaaatccatctttaggtgaaatgcaa
acattcaatcatgaaattggcgatgataatttaagggaagaaagttggataagatcatct
aatttcacagaaaaacaattatcggaaggctatgttcggtatcataatttaaaaacttca
tcgtcagttgttgaggatactgaaaaagaccgatttaccttcactgtgtcaggagctaat
gtcgaaacaccggttataacctgtgtaataaatgttcaaaaagtcagagtaattttgtct
ataaataaattgcttttgactgatgggattcaagaaaagaaactaacagctgattttttg
caagtcaacataacccatgttcatgttagcaacaatcaaatacagattagactggaaaat
cctattcaacatgctgaattgttctacaatgataatggattggccatatcaaatggtgat
gctttcacattagaagagttaaaaactggacgaatttctatcaaagtgaaaccaaaacat
gcttctcgtgctttcaatgaaatgattccatttgttgctgttattaagaagttatatcat
tccgataaaatacgactcaatgttacatatgttccggatttagataggattttgttagtg
aacaaaggtttgcaactacaagaaggtcaaaaacaagtcatcaatgttagatttttgaaa
gtttctcttccaccaagtcaaataaatgacaatgttgatagatttcgtttcaacataact
cgtaatccacaacatggaatacttggacgtgtgaaggatgaaagtaaagttgtaatagat
acagaagaggcatctgacagtattactgaatttacaatgcaagatatcattgatcaaaaa
atatattacaaacatgatgattcagaaaacgaatctgattacttcagctttcgtgttgtt
ccaatattagatggagaattaccaaagacaattgcaaaactatcaaatgtgcatctggac
ggcaatttcactatctcaatacagttagtaaacgatcagagaccagtaagagttataagt
cagccatttcaagtagttcgaaatggtgaaagacttcttactaaggacgacttatggtat
actgatgcagatacaaatttcagtgatctggatttagtatacacaagacggggtattgca
gatggagacatacttaatgctaccagcagaagacacgaaaagatattcaagtttacccag
cgacaaatagtcaatggagaagttttgttaaaacatgaaggaaatgattttggtcgattt
gtgttttgggtcagagatggaaaacattatgctacaggtttattcgttatatctgcatca
gatccttttgtgagaatcgtaaactcttctgaactgactgttatcaaaggaagagaaatc
gcaataacatctgaaaatctatggtgttctacaaatgttaaaggcttaaagaaagacatt
acttacaggatcaccaaagctcctagtaatggactattgtaccttaataattcttcagaa
gatgttcaaccaatatcaattaaatccttcacccaacaggatatttttgatgaaattgtt
gtttatgaacatagtggctcaccagtaatggaagatagcattgatttccaagtatctgct
ggagaaatttccaagcatggaaatattgcaatcaaggctgttttagaaagtcatcagaaa
ccaccaaccgttcagaagaatcgaactattgtggttgatcaaggacaaaaagtacaaata
agaaagcaagatctaaggatagttcatcttgacactcgagctgcagatattgtgtttttc
atcaagcaatctccgaagtttggaaatttagaatttctgacaaatgtcgattcagatgag
tttaatactgatccattgaaagaattcacccaatctgatatcaataaaggattagtttgg
tattcacaaaatacatcatttgtttactctgacaatgattttatcaacggagttctactt
gattattttacattcgatgtttcgaacaaaatattatcattggataatctgagattctat
tttgatattgttccttacataatccctttgaaaacgaacaacttttcagttccagagggc
agaactaaagcaatcataagagaatatttatatattgaaggaatacattttgatgaagcc
acagtggagattcgagtcactaaaccaccagagcatggtatcctggaatcaactcaacaa
attggaattgccttgaaaagtttcagttatcgcttggcaacagctgaatttctttattac
tctcacgacggttccgatttcttgcaggattcattcagtcttcaagcattcacaattgat
ggcaaaaaacaaagcaacattgttgcctcatatgttactattatcccagagaatgacgaa
caacctgttgttgttaacaatactggaatgactgtttggactaactctatcacaaaatta
tcatcgatcgttctcggagtggaagatccagatactggacctggtgatataacatacagg
atacttcctcctagtaatggttggattgcttgcaacaatgatccatcaaaatcggttttg
gaattcacacaggagcaagttaacaacggaagtattgtgtttgtccataaaggctccacc
actggtgggattacgtttcaagtggacgatggtgaaaattacgcgaataaacatatattt
gtgataactgcaaaaccattgattattgctgtagaaaacaacaaaggaatacagtctttt
cctggtacttctattgatatcacatcagatgttctccgatctacaactaatgatatggag
acaactgacagaattattacatacaaaattatttttcgacctaaatatgggaagatagtc
aaactgactaatcacacatcaacagagaatgaaacattggaggaatttactcagcaagat
atagatgataagcaagtcttttttaaacaagacattgaagttgaaaaatggtcagcgatt
gatagttttgttgttactgtcctatctccacctgctgataacataactgatgtcaaaata
ccaatcaatataacttatgatgcttttgagattgttggaaagaaaagtccaatcagtgtt
aatgaaggttgcactctaattgaaggtgaaaaaatacaaataacaactgatatacttgat
gccagtaatttgtataagaagcttcctttgcacagagacagaagtctttatggattattt
tattctctggttgggttgccgattcatggaaacatttcaatttctggtgagaatgtaaca
aagccaaatacgagtttcactcagaccaatcttattaaaaatgaagtgttctaccttcat
gatcattccgatcatattgaggattcattcaatttcaacatcttccttgttgacaaaaga
tatacagcaagtacaggaaaaccatggattgttcctggaacattttttcaagatattttc
aatatctctataactcctgttaatgataatccgcctaagttgttgacaaaagggaaagta
ctcgaggttgtggatggatttgacactcttgtacttcctgaagtcctaaatgctgttgat
cctgataattctcctgaagaagtcacttattctatcattcgacctccttctaggggtcat
attgcctttgtaaacgagtcattaacaaaaataacaaagttcactcagtttgatgtcaac
gagggaaaggttgttttcgtcccaaaaaagattaacatgacagaatcgcaattaaatgat
gctttgtacttcagtgtaactgatggaatacaaaggccggcatacaacttgtttcaaatc
aagattgttcctgtgcatttgagattgaatccgtcacaaatttctattgtgcaagcattc
tattcagcagatgttaccagcaatattctgaatgtttcaactaatggaaatttatcgctt
gtatcattccatgtcacgaagcttcctgaatcaggaatgattcttattaatgagaatcag
aactcttctttttcttatgaagatgtttcaaagaataaagtcacatttgcaatgactaaa
aattcactctcaacagattcaatggaaataaatgttcattataacaggagtattggatca
aacatgagcgttacagcaacattacaaatcatggtaacccctcttctagtacaaggttct
ctatctgtcagcaatgatggtttatcaagattagcgttatcatcgttgaacaccactccg
ttgcttgataaatcaaattcaatgcctagattcgaagtaatcagacaaccagaaaatgga
gaaatactcaaggttttttctcctgaagagacatcaaaatctgttcggaaaagagaaata
agtggcgaatattctcatctattgaaagaagtcgataaattcagtcatgaagatattgca
cttggtcgtgttttcatttatgttgataatctgaatgttactgatggaaaattggaggac
agtatatcactaagacttacagtcgaggataattctgctcaacctgccgaatttaccttt
gattttgatattgttgaaaaagaggcagaagactattcttcattctttgaacaattcctt
gtaaaagaagaacttactacaattgctgatgccgatatggatgatagtgttgattcaaca
acttcgagtatcatttctggaagtagtttacctgtatcaccttctgaaaaaaatatagag
aacgttgacaaagatgttgttgatgacccaaaaatatcaacagaggacaacaatccaatg
gatcctaaagatgttatggctgaaaatcctcagcccgcagaagatgaaacttcattacca
tggcttattccagttgctgtagttcttggattactattaatcatggctctttgtctcact
gttgtatttcttcgccacaaacattggttcaaagggaaaagttacagaacaaaaaacgat
caagcaagcgaagaaaatcactcactgacttctcgtgatgatatcctagaacaaaataat
ttgaatcccacgatgaattataatcagactaatatttcaaggcacccagaaggagagtca
cttcgcagtcctgcatgcccgggggtaactgttacacttttgaggtcggggcctgggtct
gttcaaccttcaaattatggtgaagaccggcatagttttactgtaatgggttcaacccta
ggcccccaatcatatagagatgatgtgccttcaactatatacacaccatcgactgtctat
cattatgatgacacgggaagtgttgatttccctgataatgcagaagctgaattttatgct
gctaatcacaatatttatccaaaccaaagactctatcacagcagaagtgctagatttata
gaccctgatgtattagcactttattcatctgacgaaagtataccttccatgattgatgaa
aaatatgcaatcccttatcgaggaagcactggtgctactggcagtgtaccagcggaatta
catagggctgttagtcagccaggtacgtcttatgctggtattgcggactgcagacctcgg
tcaacggcatcactgtcgaaagcggcagttacacctgaactttctttgcttccaaattca
ggacttgagagtaatcagtattggatttga
DBGET
integrated database retrieval system
