Styela clava (leathery sea squirt): 120345379
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Entry
120345379 CDS
T07291
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120345379
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120345379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
120345379
NCBI-ProteinID:
XP_039270737
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MSQELDEVSSATSQDLLFAALNQSGLSTLDSNQDEEIIGNQTDNLLESLQNSGLSFEASS
SKISGNEQVSASTSSHLVSTPQATVKPTLVNLGSKPASPKIITITQQGKKIIKVPIIKTA
ADAKGKPNIIRLPLNITSTGIKKPIIIKRTIVSTTSITPAGNITTIPTSVKRMSPVQQPL
SNVIPITLPTASFSQTPKIALTNTEAKNTYAKVTVGGKKILIPIMRKNGPSVPHKIEVPA
GSVRVSTLATTRNSPIIFNNVANVVKTQPITVVRKVAGNEIRTINSNPGSPQVRIVTKVE
SKQKLQAPPSSGLNLGSLFIESAEKEADIIPTATILPVSENIFSDKNNNSGYTDKMTITV
LPQHQKIYHRNCASPLSPVTDILSSLATVRPHSPLLKMSTNDQYNPYSTNNSSNKNRELK
HQNSWQKDSKILPKPNTVRETKPGINRSYSVQNFYKNSGSKSAKDLNLLDLKRDVVDSRK
STDELVQDEEREEEGQHANIYAEYKPSKLNIGLPHPDRVVETSSLSSVPPPDIHYKLSIP
EEVIDQGLLSALQLETITYACQKHTTFLPSGERAGFLVGDGAGVGKGRTVAGIIFENYLL
GRKRALWFSVSNDLKFDSERDLRDIGAKNIHVHMLNKFKYGKISSRENSSVKKGVIFATY
SSLIGESHFNTKYGTRLKQILHWCGKDFDGVIIFDECHKAKNLIPSGSAKPTKTGYTVLE
LQKRLPNARVIYASATGASEPRNMAYMSRIGLWGHGTPFTDFMNFIQAVERRGVGAMELV
AMDLKSRGAYIARQLSFHGVSFRIKEVQLTRKFIKMYNDAVRLWVAAREAFQVAAGLIDA
EHHMKKTMWGQFWAAHQRFFKYLCIAAKVDHASQLAREAVKHGKCVVIGLQSTGEARTLD
MLEKCGGELEDFVSTAKGVFENLIENHFPAPDRKRVTDLFGKDFYKKDDNASEDGNSQKQ
NNAKRKNATNNKSNEPVSKKIRSSVTNDNDDSASSDEENYDSAKFSGVDSDASIDYSDED
IGKIFGGGSDSDEWGGDAEESRKKKLKKKNKKKGSDMDEEADRLLEEAGLKNGPSNHSNE
IKTKTNESEQTNLTAYVNSENTEDLGLESLKLSGQNPVAKAQALKKELLRKLDSVELPNN
TLDELIDALGGPENVAEMTGRKGRVVATEEGNIQYESRTENDVRCNMLNLAEKQRFMDGE
KNIAIISEAASSGISLQSDRRARNQRRRLHLTLELPWSADRAIQQFGRTHRSNQVNAPEY
VFLISELAGEQRFASVVAKRLESLGALTHGDRRATETRDLSQYNFDNKFGRLALDSVMKS
VASLDVPIVHPPATYPGLFFRDIRRAMVGVGLISVESSGAPPQLEKEYNNIVKFMNRILG
MEVLQQNAVFQFFSDTLSNIVQKAKTHGQFDQGIMDVGSRDDCVERVDCKRFQLNAYSGT
GDKPTAAQKAGSGYVELHTVKIERGMSWDDAENAWSQLSSENEDGFYVTHLKRNGRCMAV
LCFENQLKSRKQQSYNDEDSEKLSDEFRLFTLHRPNMGKQVKRETLATIRSRYRKVEPGE
AKIWWEKQYKASLDICSHAYWQGVCHRQVQRVPCGIGKRRRTYHVLSGSVLAIWRLIEKV
LSSGMTTLYKMQIVRLKTEDGKLVGLLIPSSCVEQLTKHLQNPDHLLNPVQQLGNHALIR
TASTPVFSANNFDDEDEFIEDDNSDIEDDDDFSPDDMVSSVLAPGNTWYR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaacttgatgaagtttcgtcagcaacatcccaggatctactttttgccgcc
ttgaaccaaagtggtttatcaactcttgactcaaatcaagatgaggaaattattggaaat
caaacagacaatcttcttgagagtttacaaaactctggtctgtcgtttgaagcatcatcg
tcaaaaattagtggaaatgaacaggtgtcagcatcaacatcatctcatctggtcagcact
ccacaagccactgtgaaacccaccctagtaaatcttggttcaaaaccagcatcgccaaaa
ataatcacaattacacaacagggaaagaaaattataaaagttccaattataaaaacagct
gcagatgccaaagggaaaccaaatatcatcagactacctctcaatataacaagtactggc
atcaaaaaacctatcattatcaaaaggactatcgtttcaaccacatctataactcctgct
ggaaatattactacaattcccactagtgtgaaacgaatgtcaccagtgcaacagcctctg
tcaaacgtaataccaataacattaccgacagcatcattttcacaaactccaaaaatagct
ctaaccaacacagaagcaaaaaatacttatgctaaagtaactgttggtggcaaaaaaatt
cttattccaattatgagaaagaatggtccaagtgttccccataaaatagaagttccagct
ggtagtgtaagagtatcaacactcgcaacaacaagaaactcaccgataattttcaataat
gttgcaaacgttgttaaaacccaacctataactgttgtcagaaaggttgcaggtaatgaa
attaggactataaactcaaatcctggcagtcctcaggttcgtatcgttacaaaagtcgag
agtaaacagaagcttcaagcaccaccctcatcaggactcaatctcgggagtctattcatc
gagtctgctgaaaaggaggctgatataattcctacggccactatactgcctgtttctgag
aatatttttagtgacaagaacaataattcaggatatactgataaaatgacaattactgtt
ttaccgcaacatcagaagatttatcataggaattgcgcttctccactttctccagtaaca
gatatactttcatcattggcaactgtcaggccacattcaccattattgaagatgtcaacc
aatgatcaatacaacccatattcaacaaataattcaagtaataaaaacagagaactgaaa
catcaaaattcttggcaaaaggattcaaaaattcttcctaagccaaacactgtgagggag
acaaaaccaggaataaatagaagttattcagtacaaaacttctacaaaaattcaggatca
aaatctgctaaggatttgaacttactagacctgaaaagggatgttgtggattcccgtaag
tcaacagatgaattagttcaagatgaggaaagggaagaagaaggtcaacatgccaatatt
tatgctgaatataaaccaagcaaattgaatattggacttcctcatcctgacagagtcgtc
gagacaagttctttgtccagtgttccacctccagatattcattataaactttccattcct
gaagaagtgattgatcaaggactattgtctgcattacaacttgaaacaataacatatgct
tgtcaaaaacatacaacttttctaccgagtggagaaagagcaggattcttagtaggtgat
ggtgcaggtgtgggaaaaggaagaacagttgctggaatcatttttgaaaattatttattg
ggaaggaaaagagcgctttggtttagtgtatcgaatgatctgaaatttgattcggaacga
gatctcagagatattggtgccaaaaatattcatgttcatatgttaaataagttcaaatat
gggaaaatttcatcgagagaaaacagttctgtaaagaagggagttatttttgctacgtat
tcatcattaattggagaaagtcattttaacactaaatatggaacgagattaaaacaaata
ttgcattggtgtggaaaagattttgatggagtcattatatttgatgaatgtcacaaagcc
aaaaatttaattccatctggttcagctaaacctactaaaactggatatactgttcttgaa
ctacagaaaagactgccaaatgcacgtgttatctatgcaagcgctacaggggcttctgaa
cctcgcaatatggcgtatatgtcgcgaataggcctgtggggacatggtacacctttcact
gatttcatgaatttcattcaggctgttgaaaggcgaggtgttggggcaatggaattggtt
gccatggatttaaaatctagaggagcttacattgctaggcagctcagtttccatggagta
tcatttcgtattaaggaagtgcaattgacaagaaagtttataaaaatgtacaatgatgct
gttcgattgtgggttgctgcgagagaagcatttcaagtcgctgctggtctcattgatgcg
gaacatcacatgaaaaaaacaatgtggggtcaattttgggcagcacatcaacgatttttc
aaatatctatgcatcgctgccaaggttgatcatgcctcacaacttgctagggaagctgtt
aaacatggaaaatgtgttgtcattggattacaatctactggggaagcaagaacattggac
atgctggaaaaatgtggaggagaattagaagactttgtttctactgccaaaggtgttttt
gaaaatttgattgaaaaccattttcctgcgccagatcgaaaaagagtgactgacttgttc
ggtaaagatttttataaaaaggatgataacgcatcggaagatggaaattcacaaaaacaa
aataatgcaaaaagaaaaaatgctactaataataagtccaacgaacctgtgtccaagaaa
attcgttcatcggtaaccaatgacaatgatgactcagcatcttctgatgaagaaaattat
gattccgcaaaattttcgggtgttgattcagatgcatctattgattatagtgatgaagat
atcggaaaaatatttggaggaggctcggatagtgatgaatggggaggagatgcagaagaa
tctcgaaagaaaaagctgaaaaagaagaacaaaaagaaaggatcggatatggatgaagaa
gcagatcgattactggaagaagcaggattaaaaaatggaccttcaaaccattctaacgaa
ataaaaactaaaacaaatgaatctgaacaaactaatctcactgcctatgttaattcagag
aatacggaagatttgggacttgaaagtcttaaattgtctgggcaaaatccagttgcaaaa
gcacaagcacttaaaaaagaattgttaagaaaactcgattctgttgaattaccaaataat
acactagatgaattgattgatgctcttggaggaccagaaaatgttgctgagatgactgga
agaaaaggtagagtggtggcaacggaagaaggaaacattcaatatgaatctagaactgaa
aatgatgtgcgatgtaatatgcttaatttggcagaaaaacagaggttcatggatggtgag
aaaaatattgcaattattagtgaagctgcaagttctggaatttcattacaatcagatcgc
agagctcgaaatcaacgtcgaagacttcatttaactctggagcttccatggagtgctgat
cgagctattcaacaattcggtcgaacacatcgttccaatcaagtgaatgctcctgaatat
gttttcttaatttctgaactcgccggtgaacagagatttgcttcagttgttgcaaaacgt
ttggaaagtttgggagcgttgactcatggtgatcgtcgcgccacggaaacaagagattta
tcccaatataattttgataataaatttggaagattagcactagattctgtaatgaaatca
gttgcaagtttagatgttcctattgtacatccacctgccacttatcctggactgttcttt
agagatatcagaagagctatggttggtgttggtctcatctctgtagaatcatccggggcg
ccacctcaattagaaaaagaatataataacattgttaagttcatgaaccgtatacttgga
atggaagttttacaacaaaatgctgtttttcaatttttttccgatacattatctaatatc
gttcaaaaagcaaaaactcacggacaatttgatcaaggaattatggatgttggatctcga
gatgattgtgtcgaacgagtcgattgcaaacgatttcaattgaacgcctattctggtacc
ggcgacaaaccaacagctgcacagaaagctggcagcggttatgttgaattacacactgtg
aaaattgaacgtgggatgtcatgggatgatgctgagaatgcgtggtctcagctttcaagt
gaaaacgaagatggattttatgtcacacatttgaaaaggaatggccgatgtatggctgtc
ttgtgttttgaaaatcaacttaaatcccgcaaacaacaatcatataatgatgaagattca
gaaaaattatctgatgaattccgcctgtttacgctacatcgacctaatatggggaaacaa
gtcaaaagagaaacacttgccacaattcgatcacgatacagaaaagtggaacctggtgaa
gcgaagatttggtgggaaaaacaatacaaagcatcgttagatatttgttcccatgcgtac
tggcaaggggtttgtcatcgtcaagttcaaagagttccatgtggtattgggaagcgccga
cgtacttatcatgttttgtctggttctgtacttgctatatggagattgatagaaaaagtt
ttatcgtctgggatgacgacactatataaaatgcaaattgtcagattaaaaacagaagat
ggaaagttagttggtttgttgattccatcgagctgtgttgaacaattaaccaaacatctt
cagaatcctgatcatcttttaaatcctgttcaacaactaggaaatcatgcactaatacga
actgcatccacaccagtgttttctgcaaataattttgatgatgaagatgaattcattgaa
gatgacaacagtgatatagaagatgacgacgatttttcaccagatgatatggtttcatct
gttttagctccaggcaatacttggtatcggtaa
DBGET
integrated database retrieval system
