Styela clava (leathery sea squirt): 120345384
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Entry
120345384 CDS
T07291
Name
(RefSeq) nuclear transcription factor Y subunit alpha-like
KO
K08064
nuclear transcription factor Y, alpha
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120345384
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120345384
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120345384
NCBI-ProteinID:
XP_039270747
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MMDGRDQITGLQAHLLQASGNGSQMLQINGQNVQIVTMNVNSLLGQQQQQQQQQPLVLQA
GVGGDETIQQAPANVLNAGAGNVFQLVQGPGGSLQLQPTGGNGQVVVQTQQETAPSQPTA
SQLLMQSAAAETSNISAQTLQLGGGLQSGGSVILQTVNNNATIPNVPGLNLSSANVNVGA
LQNAGVIMMIPTGTGGFQRLQLGNMGGAEQSEEEPLYVNAKQYHRILKRRQARAKLEAAG
RLPKERKKYLHESRHKHAMNRNRGDGGRFNSGLGKEDSLPEIAQHYRRSDYKYRPQTGTS
IMNQQRISIAPTVADSGNLGGIVTNSNNQNILVSSNQMFVSPDQLSTIMSAQDTDEDVLG
RLIGQANNGNAIHNLAISQPLELQTGQHQQIGSQSNFVLSSSTSIGTVSASTNIMSDSSK
SQASNLLFNLANISKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggtcgggatcaaataactggactacaagctcatttactacaagcaagtgga
aatggtagtcaaatgcttcagataaatggtcagaatgtccaaatcgttactatgaatgta
aattcattacttggacaacaacaacaacagcagcaacaacaacctctggttttgcaagct
ggagttggaggagatgaaacaatacaacaagcacctgctaatgtactgaatgcaggtgca
ggaaatgtgtttcaacttgtgcaaggtcctggtggaagtctacaattgcaacccactggt
ggaaatggacaagtcgttgtacagacacaacaggaaactgcaccaagtcaaccgacagca
tctcaattgttaatgcaaagtgcagctgctgaaacttccaatatatcggcgcaaacatta
cagctgggaggaggactccagtctggtggttctgtaatattgcaaactgttaataacaat
gcaacaattcccaatgttcctggtttgaatctatcgtctgcaaatgttaatgttggtgct
ctacagaatgctggtgttattatgatgataccaactggtactggtgggtttcagcgatta
cagttgggtaacatgggaggtgcagaacaatcagaggaagaacctttatatgtaaatgca
aaacaatatcataggatactgaaaagaagacaagccagggcaaaacttgaagctgccggg
agattaccaaaagaaagaaagaaatatttgcacgagtctagacataaacatgcaatgaat
aggaatcggggtgatggagggagattcaattcgggtctgggaaaagaagactcactacca
gagattgcacaacactatcgaagaagtgattacaagtacagacctcaaactggaacatct
attatgaatcaacaacgtatatcgattgcacccacggtagcagatagtggaaatctggga
ggaattgtcacaaactctaacaatcagaatattttggtttcatcaaaccaaatgtttgtt
tctccagatcagctaagcactattatgagtgcacaagacactgatgaagatgttttgggg
aggcttattggtcaagcaaataatggcaatgctatccataacttagccatctcacaacca
ttagaacttcaaactggccaacatcaacagattggcagccaatcaaattttgttttgagt
tcttccacatcgatcggaactgtgtcagcctccactaatattatgtctgattcgtcaaaa
tcacaagcatctaatctgttatttaatctagctaatatttcaaagagttga
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