Styela clava (leathery sea squirt): 120345460
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Entry
120345460 CDS
T07291
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120345460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120345460
Spliceosome [BR:
sclv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120345460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120345460
NCBI-ProteinID:
XP_039270851
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDIKSIKNEVDSEENSEPAKKRKISDSEIKQEAPEQKILALVEEYSSEEEYRYDDEPKID
RSRSCPYLDTIKRSVLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGKKSHAYTHSVEIN
HHVFLNLRTLKFYCLPDNYEILDSSLEDITYVLNPTFKKNHIAELSTSSKLSRAYDSTTY
LPGIVGLNNIKANDYCNVVLQALSNIPPLRDYFLREENYSHIKRPPGDIMILLTQRFGEL
IRKLWNPRNFKAHVSPHEMLQSIVLCSRKRFQITVQGDPLELLAWFLNSLHVALNGTKKK
NSSIITKTFQGEMKIYSRKVPNPELPEEEKVKLLDLPEYQETMQKSPFLYLTLDLLAAPL
YKDEQEQNIIPQVPLFNLLAKFNGLTEKEYKGKRDFTMKKFELTRLPPFLIFYIKRFTKN
LFFIEKNPTIVNFPVKNIDLAEFVAADADIKDTCYDLVANIVHDGDPNIGKGTYRVYILH
QGSNQWYEMQDLHVSDILPQMITLSEAYIQIWAQRKGGKEYAFSNEMQAKAKSDGVKMET
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatataaaaagtattaaaaacgaagtggattcggaagagaactccgaacctgcaaaa
aaacgaaaaatttcagacagtgaaattaaacaagaagctccagaacaaaaaatcttagct
ttggttgaagaatattcgtctgaagaagaatacaggtatgatgacgaaccaaagattgat
agaagtcgaagctgcccgtatttagatacaattaaacgcagtgttttagattttgatttc
gaaaaattgtgctcagtgtctctctctcatttgaacgtttatgcttgtctcgtttgcgga
aaatattttcaaggaaggggcaaaaaatctcatgcctacactcacagtgttgagataaat
catcatgtatttttgaatctgcggactctgaaattttactgcctccctgataactatgaa
attttagattcatcacttgaagatattacttatgttcttaaccctacttttaaaaagaat
catatcgctgaattaagcacaagttccaaacttagtagagcttacgatagcacaacgtac
ttgccaggaatagtcgggctcaataacatcaaagcgaatgattattgtaacgttgtttta
caagcgttgtcaaacatccctccattgagggattattttttgagagaagagaattactct
catattaaacggccacctggtgacatcatgattcttttaactcaaagatttggagaattg
attcgtaaattatggaatcctcgtaatttcaaagcccacgtctcaccacacgagatgctg
cagagcattgtgctctgctctcgtaaacgttttcaaatcactgtacaaggtgaccctctt
gaattacttgcttggtttttaaattctttacatgttgccctaaatggaaccaaaaagaag
aattccagcatcattactaaaacatttcaaggagagatgaaaatttattcaagaaaagtt
cctaaccctgaactaccagaagaagaaaaagtgaaactgttagatctgccagaataccaa
gaaacaatgcaaaaatcaccgtttttatatcttacattagacctacttgctgcccctctc
tacaaggacgaacaggaacaaaatattatcccacaagttccgttatttaaccttcttgca
aaatttaacggcctcactgagaaagaatacaaaggaaaacgagatttcaccatgaaaaag
tttgagctgacacgtctccctccatttcttattttctacatcaaacgattcacgaaaaat
ttatttttcatcgagaaaaatcctacaattgttaatttcccggtcaaaaatatcgatctt
gctgaatttgtcgctgctgatgcagatattaaagacacatgttatgatctggttgcaaat
attgtgcatgatggcgacccgaacattgggaaaggcacatatcgtgtttatattcttcac
caaggatccaaccaatggtatgagatgcaagatcttcatgtcagcgacattttgccacaa
atgattactctctctgaagcttacatccaaatatgggcccaaagaaaaggtggaaaagaa
tatgcattttctaatgaaatgcaagccaaagcaaaatcagatggagtcaaaatggaaaca
taa
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