Styela clava (leathery sea squirt): 120345469
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Entry
120345469 CDS
T07291
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120345469
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Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Sid-5
CHB_HEX_C
DUF2909
Phage_DNA_bind
Motif
Other DBs
NCBI-GeneID:
120345469
NCBI-ProteinID:
XP_039270860
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MAFIKFICILIITVSLIITGKGEDAESVLSMQKHIGGAEKLVTLKRIIRDVETGSGETAT
DEEQNILRKHTDVHVFSNDSNPSISLIWTGTEGALIALTTMGNGITLIPSRLYRSSNFGR
SFVDISDKIEHDRILNNHGMLVSPVDSNNVMLVTDQSFSLFARGMDYRSVVYITTDNGQS
FSKSKLKFIIDPSSVYFNKYDTLKILAISSDNHGLWISYDFGLVWRHISDHVIQVRWDPT
DKDTFYYAKDPTGSMISGAFNNELYRGKASYIESTKIAEHIYSFGVQGGFIFISVEFLSH
NGSRVMHVSKDKGVTWDAAQIPLINKQQFYSLLDMSEDMVFVHVDADGGSGDGSIYTSDE
RGIIYSKSLDHHLYPSLGSVTDFYKVSSLEGVYITSQLEHQGSTIHSMITYNKGGTWQNI
DSPKNSVCPPTEKVCFLQIHSLFSRSKGVAIPEFPKSSASATGIIIAHGNIGDALNFNTP
DVYISNDGGYSWLQPPHLKGPQFYAIGDSGGLLFAVNYSKSVPTNVIKYSMDEGQSWEEY
KFVDSPILVTGLSVEPGSRSTSLGLWGWDKSGDGAWRSITMDFSAIMKKPCQKSDYQDWK
AHESNKEYGEDSCLLGADVIFNRRKKGTVCINGKQYQNAVTLKPCQCQKTDYLCDYGYVR
EGFDCVRDGDFQATHIDICKKDQDEIIKTKGYRKIPGDKCQGGFTPNSQVIPLHKKCKPS
EEKKDDFGVDKDNFSQYHPPGETKKSTSPGVIVFLVFVVVVLILALVYIVRKRQMSGKRV
KYVPLPTSEHAASYGTGAESNSLMDVEDGAVNGTTPRPNGNSSISYHDDSDEDMLIS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcataaaatttatatgcatattaatcatcactgtttcgctgataataactggt
aaaggtgaggacgctgaaagtgttttatctatgcaaaagcatattggtggtgcagaaaaa
cttgttactttgaaaaggattattcgtgatgttgagactgggtctggtgaaactgcgacc
gacgaagaacaaaatatattgaggaaacacactgatgtgcatgtgttcagcaacgacagc
aacccatcaatatctctaatatggactggtacagaaggtgccttaattgctttaacaaca
atgggaaatgggataaccttaattccatcaaggctttacagaagttctaactttggaaga
tcttttgtggacatatcagacaaaatcgagcatgatagaattctgaacaatcatggaatg
cttgtcagcccagttgattccaacaatgtgatgttggtcactgatcagagtttttcccta
tttgctcgtgggatggattacaggagcgttgtgtatattactacagataatggtcaaagt
ttttcgaagagtaaactcaagtttataattgatcctagttctgtctatttcaacaaatat
gatactttgaaaatcttggcaatttcatctgacaaccatggcttgtggatttcttatgat
tttggtttggtatggcgacatatatctgatcatgtgattcaagtaagatgggatcctaca
gataaagacacattttattatgcaaaagatccaactgggagcatgatttctggtgccttc
aataatgaattgtatcgcggtaaagcatcgtatatagaatcaacaaaaattgcggaacat
atttatagctttggtgttcaaggtggattcatctttatatcagtggaatttctttctcac
aatggaagtagagtgatgcatgtgtcaaaagataaaggtgtgacgtgggatgcggctcag
atacctttaataaacaaacaacagttttattctttacttgacatgtctgaagatatggta
tttgtgcatgtggatgcagatggaggttcaggtgatggaagtatttatacttcagatgaa
cgaggtattatttattcaaaatcactcgaccatcatttgtatccaagtttaggaagcgtg
actgatttctataaggtttctagtctcgaaggtgtttacataacatcacaactcgaacat
caaggctcaactattcattcaatgattacttacaataaaggaggaacatggcaaaatatt
gattcgccaaaaaacagcgtttgtcctcctactgagaaagtgtgctttcttcaaattcac
agtttgtttagtcgatcaaaaggtgtagcaatacctgagtttcctaaatcttctgccagt
gctactggaatcatcattgctcatggaaatataggcgacgcattgaattttaatactccc
gatgtatatatttcaaatgacggtggatattcatggcttcaacctccacatttgaaaggt
cctcaattctatgctattggagattctggtggattgttatttgccgtcaactattcaaaa
tcggttcctactaacgttataaaatattctatggatgaaggccaatcatgggaagaatac
aaattcgtagattcgcctatcctagtaacaggcctttccgttgaaccaggttcacgtagt
acaagcttaggtttatggggatgggataagagtggtgatggagcatggagatctattact
atggatttctcagctattatgaagaaaccttgtcaaaagagtgattatcaagactggaaa
gctcatgaatcgaacaaagaatatggagaagatagttgtcttctaggtgctgatgtgatt
ttcaatagaaggaagaaaggtactgtttgtatcaatggcaaacaatatcagaatgcagta
acgttgaagccatgtcaatgccagaagacagattatttgtgtgattatggttatgttcga
gaaggcttcgattgtgtcagggatggagattttcaggcaacacatatagatatttgtaag
aaagatcaagatgaaatcataaaaacaaaaggttaccgaaaaataccaggagataaatgt
caaggcggtttcactccaaattcacaagtcattcctttgcataaaaagtgtaaacctagt
gaagagaagaaagatgattttggtgtcgataaggataatttttcacaatatcatccacct
ggagaaacaaagaaatcgacatctccaggagtaatagttttcttggtatttgttgtcgtt
gttctcatccttgcacttgtatatattgtcagaaaacgtcaaatgagtggaaaacgagta
aagtatgttccgttaccaacatctgaacatgcagcgagttatggtactggagcagaatcg
aactcacttatggatgtggaagatggtgctgtgaatggtacaacgcctcgtccaaatgga
aatagtagcatttcatatcatgatgattcagatgaggacatgttgattagttga
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