Styela clava (leathery sea squirt): 120345531
Help
Entry
120345531 CDS
T07291
Name
(RefSeq) m7GpppN-mRNA hydrolase-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120345531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120345531
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120345531
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120345531
mRNA degradation factors
5'-3' decay
Decapping complex
120345531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
YgjP-like
NUDIX_4
DUF2585
Monjiviricetes_fusion
Motif
Other DBs
NCBI-GeneID:
120345531
NCBI-ProteinID:
XP_039270946
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MMDNRKRAPVIVISNDVLDDLCSRFLLNIPGPEKDDMVRLCFQIELAHWFYLDFYRTENQ
DLPDCRVRDFAKIIFENYPFLLKPTGANIDEVIDRWREYKRSVPTYGAVILDETMDHVLL
VQGFVVKSSWGFPKGKVNKNEKAEDCAAREVLEETGFDIKPYMNTTEYVEQRFNEQLTRL
YYVVGVPCMTKFSPKTRGEIKSVEWFNMDDLPCHKKDMTPKQNLSMAPNNFFMVIPFVAK
IRKWIAGQRNRFQKTQKSSKPSTPVKKIHHSGSNHKLEGLSKAQFEHLSSTNPLPVVNKK
EDSLREAERQRQYFARENNLQLEKILRIKSGKSSPQPQKIQPRNRSNSPHHKLSSPVGYS
YVSNRGRGRILYSEAMPECWKNFQFDLASLQKVIDEFTP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatggataacagaaaacgtgctcctgtaatagtgatttcaaatgatgttctggatgat
ctatgcagccgatttttattgaatattccaggacctgagaaagatgatatggttcgtctc
tgttttcaaattgaattggcccattggttttatttggatttttatcgaacagaaaatcag
gatttacctgactgtcgtgtacgagattttgcgaaaattatttttgaaaactatccattc
ctgctcaaaccgactggtgctaatattgatgaggtaatagatcgttggagagaatacaaa
cgtagtgttccaacttatggtgcagttatcctggacgaaactatggaccatgttttactt
gttcaaggttttgttgttaaatctagctggggatttccaaaagggaaagtaaataaaaat
gaaaaggcggaagattgtgctgctcgtgaagttctagaagaaacaggatttgacataaaa
ccatacatgaacacaacagaatatgttgaacagagattcaacgaacaactcacaaggttg
tattatgtggttggtgtgccctgcatgacaaaattttctcctaaaacacgaggggaaatt
aaaagtgtagagtggtttaatatggatgacttgccatgccataaaaaagacatgaccccc
aaacaaaatttatctatggcaccaaataatttttttatggtgataccttttgttgcaaag
atacgaaaatggattgcaggacagagaaatcgctttcagaagacccagaaatcttcgaaa
ccatcaacaccagtgaaaaaaatccatcattcaggtagcaatcataaacttgaaggtctc
agcaaagctcagtttgagcatctatcaagcacaaatcctctaccagttgtgaataagaaa
gaagattctttaagagaagctgaaagacaaagacaatattttgcacgagaaaacaaccta
caattagaaaaaattctacgaattaaatctggaaaaagttctcctcaaccacaaaaaatt
caaccaagaaacaggtctaattctcctcatcataagttgtcttcgcctgtgggatatagc
tatgtctcgaatcgtggccgaggacgaattttatacagtgaggccatgcccgaatgttgg
aaaaactttcagtttgatttagcctcgttgcagaaggtcattgatgagtttacaccgtag
DBGET
integrated database retrieval system
