Styela clava (leathery sea squirt): 120345534
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Entry
120345534 CDS
T07291
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K21862
voltage-gated cation channel
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120345534
Transporters [BR:
sclv02000
]
Other transporters
Pores ion channels [TC:
1
]
120345534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
120345534
NCBI-ProteinID:
XP_039270948
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MENELESEYKLFTIDTFDELRRNAERKKQQKLKAAELNKKNQSDAATDTQGDETGPDPTL
CDGEVLPQYYGKCPDRLLGRPIEDLDPYYKERGEETFCVATERFSSMYIYRFSASGSCFI
FSPFNPIRRLAIRIAVNQFFDYFVMLTIVVNCVFLALDNEIVESEYVFTAIYTCEMLIKM
LARGVFLSKFTYLRDGWNWLDFIVVMLAWVTILLTIISANIGLSGLSGLRTFRVIRAFKS
FTIVPGLKTIVNALLQSLKPLAEVMVIMLFLVVVISLIALQAYQGVLRRKCVKFLPSADN
LTAEEFNNYVQDSNNWNPVSGEKEVCGNASSSGLCPDGYVCMQDVGENPNHGLTNFDHFG
WAMLTSFQLLTLDFWENVYNMIIRAEGAWNVLFFFMSVILGPFYLLNLLLAVVTLAYSKE
HEKQTKLREMRERAKENARRRNKRRRLLMERAKQKLQSPASFGDVVEHQIGSSLRERAEN
GGLHVNTGNGDSGSEKKRNFVSGAIKKDNTEEQDSRSQIPIVIKGNSERDLSQNDNQLTR
EPSYSKLSDSKDTKRATFRNSSRKNISLESSESASSTVPEWKKWICKRYNSFHGACCSWS
CHPRFVEFQNFLLKIVEHKLFEGIVVLSILTNTAFLAMDHHEIHPTFESVLIHGNYVFTG
IFAIEAVLKIFAMSPLEYLRNPWNVFDFTIVLISLIEFMIPSSTGALSVLRSLRLMRVFR
LARIWTTMRKLMSIILKSLSAVVYLTIVLFMVLFIFAVVGKQLFGHAYINSGDKFDDGQV
PRWNFVDFYHSFLLVWRVMCGEWIEPLHDCMMLVDASCIPVFLLMTFIGNFLVLNLFTAI
LLEAFNVDNLKSKQVDQKTAKLKLGVERFRKLLKKSQSRKSVDVTAANDCKENENNQNKE
NGTHNPNEPKNNDETTGSTNTLNSGISSPKRSMSATDIFALHRATQKERALSLDESSEED
SESITIKKNPPPLKRSFSQDSPSPPNDHPFRPRPRRQGTLTKQSRISEDSPVTIKKSNFV
PMTIQEVDENEPNSTEDNDAANNSVSKKVTFAVSGNSKVYPKRQGDAENGIEESDLAVQI
KLPWYKKCCASLCGENEKENVKSVVAIEKTEDTPYENHMEHEQKKKTKPKNAPSCFPQWC
NCCDRYGENCLFRKWKIFRNFIFRVVSHQIFEWFILFIILASTVCLAMEDVYLKEDKVKV
QVLNILEYVFTTIFTIEMILKWIGIGWSKYFTNWWCIIDFVIVVISWIGIGASAVGEVES
LKALRTLRALRPLRAISRWQGMRVVVNALVYCIPSIANVLCVCMLLWLVFSIIGVQQFKG
RFYRCEDLEGNVLNHTIVPNRTICEQHTDYRWITPRINFDNVLNGMIALFQVATFEGWIE
IMADASDTVNVDEQPYREANKYSYVFFFCFVLIGSFFILNLIVGVIIESFQKLRKQTESS
SAVEAFLTESQKNFYKTMRTMLNRKPKKTIPPPENPTQQKIFKLVTHSKFEVAVFSVIVL
NMITLAMEHYQMSKTWTTVLRYVDITFTAVFSIEATLKIIGTRFYYFRDPFNVFDFVVVI
LSITGFILEELLTFLVSPTLLRVVRVFRVFRVLRVIRAARGIRRLILTLMISLPALFNIA
VLLGVFMIIFAILGMSFFMDVKLRGALNDIVNFRTFGNSMMLLFRLMTSAGWNDVLDPLM
NDTDCDGADCGKYHFAIIYFVAYIFLVFLVVVNMYIAIILENFDEIFQQEESGVGQDDFE
YFYVVWGRYDPKASQFVSIAELSNLLHSLHPPFQLAKPNEIKIAALNLPIVNGDKVHCLD
VLFALVKRIMGEVEISDQMREEAEARLLKSFPNRKTLKAETTTLVLRRRVKAAKVIQEAW
RGFHGRRRRGAIDVSSDIFSHVSSSDFTRSNSFSLSSDISASSQKQTLKTEISGISKLPS
VDEIQQLHTENNNIKPNEALVEHHIYPTKDGDVAEIEIPQIPENENILNAPPDVEDASQT
DIKKQLASSPIRMIKESESDSKLNEVNTSSTNGEVRSDQDADSTCHDNVVMNNGTIKMNE
ASGKVDDILNSPQPRKTSLERRAKSAQMDVRTNKTKLDQLRPSTSLQVIRNDHALEEKAS
TDDQDFSLDIQESDHILQTPLKKQTNMEKHENTQNSSVSLPKPDSLDSGSEKHFHSSETN
AWHQTLQKSKSDVARLSEDSINIKDSSQESRPVVGKNLKFNPQTGKFKVKTKKDEVELVE
MSRSPSTKINNNTNSITPGKTEVDQSLVITNNNVSESKFTNVTEENSSQA
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgaactagaaagcgaatacaagttatttacgatcgacacatttgatgagtta
agacgaaatgctgaaagaaagaaacaacaaaagctcaaagctgctgaactgaataaaaag
aatcagagcgacgctgcaacagacacacagggcgatgaaaccggaccggatccaacgctt
tgtgacggcgaagtattaccgcagtattatggaaagtgtcctgatcgacttcttggtcga
ccaatcgaagatctcgatccatactataaagagcggggtgaagagactttctgtgtcgca
actgaaagattctccagcatgtatatatatcgattctcagcatcgggatcatgtttcatc
ttttcacctttcaacccgattagaagattagcaattcgcattgccgtcaaccaatttttt
gactattttgtcatgttaacaattgttgtcaactgcgtattcttagcgttggataacgaa
attgtcgaatcagaatacgttttcactgcaatttacacctgtgaaatgctcataaaaatg
ttggcaagaggagtttttttgagtaaatttacatatctacgtgatggttggaattggctg
gatttcatcgttgtcatgcttgcatgggtgacaatactcctcactattatatcggcaaat
atcggcttatcagggttgtcgggattgcgaacttttcgtgttattagagccttcaaatca
ttcactattgttccaggtctcaaaacgattgtaaacgcgcttttgcaatctttaaagccg
ttagctgaagtgatggtaatcatgttatttctcgtcgttgtcatatcactcatcgcactg
caggcatatcaaggtgttttaagaagaaaatgcgtcaaatttttgccttcggctgataat
ttaactgcagaagaattcaataattatgtacaagatagcaataattggaatcctgtgtct
ggagagaaagaagtttgcggcaacgcttcttcgagtggactatgtcctgatggatatgtg
tgtatgcaggacgttggtgaaaatccaaatcacggacttactaatttcgatcactttgga
tgggcaatgctgacgtcatttcagcttttgacgttagacttttgggagaatgtttataac
atgattattcgtgcggaaggtgcgtggaacgttttgttcttttttatgtcagtcatattg
gggcctttctatctactcaacttgttattggcggtcgttactcttgcttacagtaaagaa
cacgaaaaacagacaaaactgcgcgaaatgcgcgaaagagctaaagaaaacgcacgtcgc
agaaacaaaagacgtcgattgcttatggaaagggcgaaacagaaattacaatcacctgct
tcgttcggggacgtcgtagaacatcaaatagggtcatctttgcgagagcgtgctgaaaat
ggtggcctacacgtcaataccggaaatggcgactcaggttcagaaaaaaagaggaatttt
gtttctggtgcaatcaagaaggataatacagaagagcaggactctcgttctcaaattccg
atagttataaaaggaaactcggaaagggatttatcacaaaacgacaatcaactgacgaga
gagccaagttattcaaaactttctgattcaaaagatactaaaagagcgacatttcgaaat
agtagcagaaaaaatatatcgcttgaaagctctgaatcagcctcaagcactgtaccagaa
tggaagaaatggatttgtaagagatataattcattccatggagcatgttgttcatggtcg
tgtcacccaagatttgttgaattccagaactttcttctgaagattgttgaacataaacta
ttcgagggtattgtcgtcctcagtattttaacaaacacagcatttcttgctatggatcat
catgaaatacatcctactttcgaaagcgttctcattcatggaaactatgtttttactgga
atatttgcaatcgaagctgttttaaagatttttgccatgtcgcctcttgagtatctcaga
aatccttggaatgtgtttgattttacaattgttttaataagtcttattgaatttatgatt
ccatccagtaccggtgctttgtcagttctgagaagcttgagactgatgagagtatttcgt
cttgcacgcatctggacaactatgcgaaaactgatgtctattattttaaaaagtttgagt
gccgttgtatatctaacaattgtactatttatggtgcttttcatatttgctgttgtagga
aaacaactctttggtcatgcttacattaactcaggcgataaattcgacgacggtcaggtt
cctcgttggaatttcgtcgatttttatcattcgtttctattagtttggagagttatgtgt
ggtgaatggatagaacctttacacgattgtatgatgttggttgatgcttcatgcattccc
gtatttttgttgatgacattcatagggaattttcttgtgttaaaccttttcaccgctata
ttattggaagctttcaacgttgataatctcaagtcaaaacaagtagatcaaaaaacagct
aaactgaagttgggggtcgagagatttcgaaaattactgaaaaaatcacaaagtagaaag
tcagtggatgttactgctgcgaatgattgcaaggaaaatgaaaataatcaaaacaaagaa
aatggaacgcataatccgaacgagcctaaaaacaacgatgaaactacaggcagcacaaat
actttgaattctgggatttcttcacctaaacgatcgatgtctgcaactgacatatttgct
ctgcatcgagcaactcaaaaagaaagagcactctcgctcgacgagagttccgaagaagac
tctgaaagtatcacaataaagaaaaatcctcctccactaaaaagatcgttttctcaagac
agcccaagcccaccaaatgaccatccgttcagaccaagaccacgtaggcaagggacattg
acaaagcagtcaagaattagcgaggattctcctgtcacaataaagaaatcaaattttgta
ccaatgacaatccaagaagttgacgagaacgaacccaacagtaccgaagacaacgatgca
gctaataattcagtctcgaagaaagtcacttttgctgtatcaggaaatagcaaggtatat
cctaaaagacaaggcgatgcagaaaatggcattgaagaatcagatttagctgttcaaata
aagctaccttggtacaaaaagtgttgtgcctccttgtgtggagaaaatgagaaggaaaac
gtaaaatcggtagtggccattgaaaaaactgaagacacgccatatgaaaatcacatggaa
catgaacagaagaaaaaaacaaaaccgaagaatgccccatcttgttttcctcaatggtgc
aactgctgcgacagatatggcgaaaattgtctgtttcgaaaatggaaaatattccgaaac
ttcatatttcgagttgttagtcatcaaatatttgagtggttcattctattcatcattctg
gcaagcactgtttgcttggcgatggaagacgtgtatcttaaagaagataaagtaaaagtg
caagttctaaatattttggaatatgttttcacaactatttttacaatagagatgatttta
aaatggatcggaattggatggtccaaatattttaccaattggtggtgcatcatcgatttc
gtcatcgtcgtgatttcctggattggtattggagcatctgcagttggggaagtcgaatct
ttaaaagctttgagaacattgagagcactacgtcccttacgtgcaatatctaggtggcaa
ggaatgagggtcgtcgttaacgcattggtgtattgcatcccgtcaattgctaacgtattg
tgcgtctgtatgctgttatggcttgttttcagcattatcggagttcagcaattcaaagga
agattctacaggtgtgaagatttagaaggcaatgtactgaaccacactattgtaccgaat
cgaacgatttgcgaacaacataccgattatagatggatcaccccgagaatcaatttcgat
aatgtactcaatggcatgatagcgctttttcaagtggctacttttgaaggctggattgag
ataatggcagatgctagcgatactgtaaatgttgatgaacagccgtacagagaagcaaac
aaatattcatatgttttcttcttctgttttgtactgatcggatcatttttcatattgaat
cttattgttggtgtcatcatcgaaagttttcagaagctaagaaaacagactgaatcatca
tcagctgttgaagcatttctaacagaaagtcagaaaaacttttataaaacgatgagaaca
atgttgaacagaaaacccaagaaaacaattccaccaccagagaaccctactcaacaaaaa
atcttcaaattggtgacgcacagcaagtttgaggtggccgtattctccgtaattgtgttg
aacatgatcactttagcaatggaacattaccagatgtcaaaaacatggacaacagtgctt
agatacgtagacattaccttcactgcggtattttcaattgaagcgacgttgaaaattatt
ggaacaagattctactattttcgagatccttttaatgtctttgacttcgttgttgttata
ctctctataacaggtttcattcttgaagaattattgacatttttggtatctccaacattg
ttgagagtggtgcgagtattccgtgtgtttcgtgtattgcgtgtgattcgtgcagctcga
ggaatcagaagattgattcttactttgatgatttcacttccagctcttttcaacattgca
gtattgttaggagtattcatgatcatcttcgctattctaggtatgtcattctttatggac
gtgaaattacgaggagctcttaacgatatcgttaacttccgcactttcgggaattctatg
atgcttctatttcgtttgatgacgtcagcaggatggaatgacgtattggatccactcatg
aacgacactgattgcgatggagcggattgcggaaaatatcattttgctatcatatatttt
gtagcttacatctttttagtatttttggttgttgtcaacatgtacattgccatcatcctc
gaaaatttcgacgaaatatttcagcaggaagaatctggcgttggtcaggatgatttcgag
tatttctatgtggtgtggggaagatacgatcctaaagcttctcagttcgtttcaattgca
gagctatccaatctcttacacagtttacatccaccgtttcaactcgcaaaaccgaatgag
attaaaattgcagcgctcaatctgcccatagtcaatggagataaagttcattgtctggac
gttttatttgctcttgtaaaacgcattatgggtgaagttgaaatatctgatcaaatgcga
gaggaagccgaagccaggttattgaagtctttcccaaatagaaaaacgttgaaagcagag
acaacaactcttgttttacgcagaagagtaaaagcagcaaaagtcatacaggaggcgtgg
agaggtttccacggaaggagacggcgaggagcaatcgacgtgagctccgatatattcagc
catgtttcgtcatcggattttactcgatccaattcattttcactatctagtgacatatca
gcttcatctcagaaacaaactctgaaaactgaaataagtggaataagcaaattgcctagt
gtcgatgaaatacaacaattacatactgaaaacaataatattaaaccaaacgaagcctta
gttgaacaccatatatatcctacaaaagatggagatgtagccgaaatcgaaataccccaa
attccagaaaatgagaatattttgaacgcccctcctgacgtggaagatgcaagtcaaact
gacatcaaaaaacaattagcatcatcacctattcgaatgattaaagaaagcgaatccgat
tcaaaattgaatgaagtaaacacatcgtcaacaaacggtgaagtaagaagtgaccaagat
gctgactcaacctgtcacgacaatgttgtcatgaataatggaacgattaaaatgaatgaa
gcttcaggaaaggtggacgatatattaaattcaccgcagccaagaaaaacctcattagaa
aggcgagctaaatcagcccaaatggatgtacgaactaataaaaccaaactcgatcaactg
cgaccatcaacttctctacaagtcatacgtaacgatcatgcgcttgaagaaaaggcatca
actgatgatcaagatttttccctggatattcaagagtcagatcatatacttcagacacca
ctcaaaaagcaaacgaatatggaaaaacacgaaaacacacagaattcttctgtgtctctt
cctaaaccggatagtttagactccggaagcgaaaaacatttccattcttcagagacaaac
gcttggcatcagactttacaaaaatctaaatctgatgttgctcgtttatctgaggattct
ataaacataaaagattcttcacaagaatccagacccgttgtagggaaaaacttaaaattc
aatccacaaacagggaaatttaaagttaaaacgaaaaaggacgaagttgaattggtggaa
atgtcgcgatccccttctactaaaattaataataacacaaactctattactccaggtaaa
actgaagttgatcagtctttagtaataacaaataacaatgtatccgaaagcaaattcaca
aacgtaacggaagagaattctagccaggcttag
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integrated database retrieval system
