Styela clava (leathery sea squirt): 120345546
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Entry
120345546 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120345546 isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120345546
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120345546
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120345546
03036 Chromosome and associated proteins [BR:
sclv03036
]
120345546
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120345546
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120345546
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120345546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
120345546
NCBI-ProteinID:
XP_039270967
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MWHNLNEDSPTHKIGNKLLKQKSRRLLDGVLRKRILVDSMRGYGDELQYNVACRSPNYRP
EDLSSALDRLRFIKQSLMNRGRPDPDGFLILQKREGFAAPVYTPKTMASDRNANYLTKPF
AINTGKQKPPIFVFSSSPSEMHAPTHIYEEKPLVHTKNSARSAISNALSNSMGFMDFSAQ
SHNTPNFVIKNNYAPTTKSGNSRIVPINVQQKTSPRTGTKHFDSTQKTNRDKTAQSRCKS
TIYVPMSVTTNSTSNSSIITMPMNHCNFMAESKNSPSHMDFVTQSNSQIKSCRDTSVEQF
SPPALSLDSTKLSNGGASKFRIKKISIAAVPNQQKPNTRTEPRRNYVTGVMIQKNGSSSI
RKNLIPDYNTNELTKNNLKDNDKNIIVKQTHRSAMKPQISDFRHADVSEDVKDGRNADTV
KRKVSSTYEASRISKEKFFDVINNTNEYKNTTITLVTNGSTPHVREEPVQPIVAPKVESE
KPEIPRFYFPKGKPRSQDEIHTTIQKISEICSCFDGGMVPLTEMGLVAKACNLSIYWKGA
LFYAAADDIDAKEVSESSLIRMWKKVTSTNHDQSSRFVALLCKPTKNCLDFEDFLPLLKD
IVDSHPGLVFLKDAPEFHTRYMNTVIARIFYVVNRSWSGQITAQELRKSNFLTVLSLLEE
EDDINAITDYFSYEHFYVIYCKFWELDTDHDLVIDKHDLIGYGDGVLSSRLIERVLSGAV
TRWDTSDHQLSRMSYVDFVWFILSEEDKKSPTSIEYWFRCMDLDGDGVISMYEMEYFYEE
QSQKLEQLDIEPLPFEDCICQIFDIVNPKYPGRVSLKDLKTCKMAHVFFDTFFNIAKYLN
NEQKDPLAPQNNMDGSIMAMSDWDNFAAEEYEMLVAEEQSTKLTDLSKILLEEDDSADIL
DRTEDLSEMKISNSNNPYIKTENNNNDQLRESYSDKKFIEGATSSSRIEPGTQIAQTLI
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtggcataatctcaatgaagattcccccacacacaagattgggaataagttgctgaaa
caaaaaagtcgtcggttgctcgatggagttttacggaaaaggatattagttgattcaatg
agaggatatggcgacgaactacaatataatgttgcttgtcgctcaccaaattacagacca
gaagatttatctagcgctttggacagattaagatttatcaaacagtctctgatgaataga
ggcagaccagatcctgatggctttcttattttgcaaaaaagagaaggtttcgcagccccc
gtgtacaccccaaaaacaatggcgtctgaccgcaatgctaactacctcacaaaaccattt
gcaataaatactggcaagcaaaaacctccgatatttgtattttcgtcttcaccttcagag
atgcatgccccaacacatatttacgaagagaaacctcttgttcacaccaaaaactccgct
cgaagtgctatatcaaacgctttgtctaattctatgggattcatggatttctctgctcaa
agtcataacactcctaatttcgtgattaagaacaattacgcaccaacgaccaaaagtgga
aacagtagaattgttccgataaatgtacagcaaaaaacgtcacctcggactggaacaaaa
cacttcgattcgactcaaaaaacaaatagagacaaaacggcccaatccagatgcaaaagc
acaatatatgtaccaatgtcagtaacaactaactcaacgtccaattcttccattataaca
atgcccatgaatcattgcaacttcatggcagagtcgaaaaattctccttcgcacatggat
tttgtgactcaatcgaattcccagataaaatcgtgcagagacacttccgttgaacaattt
tctccgccagctttatcgctagattccaccaaattaagcaatggaggtgcatcaaaattc
cgaattaagaaaatatctatagcagcagtacccaaccaacaaaagccaaacacacggact
gagccacgacgaaattacgttacaggcgtaatgatacagaaaaatggttcttcttctata
agaaaaaacttgatccctgattataatacaaatgaattgacaaaaaataacttaaaagat
aatgacaaaaatataatcgtaaaacaaactcataggtctgcaatgaagccccaaatcagc
gatttcaggcatgcagatgtttcggaagatgtcaaagacggtaggaacgcggacactgtg
aaaagaaaggtttcatcaacgtatgaagcatctcgaatctctaaagagaaattttttgat
gtcataaataacacaaacgagtataagaatacgacgattactcttgttacgaacggatcc
acaccacacgtgagagaagaaccagtgcaaccaattgtcgctcctaaagttgaatctgaa
aagcccgaaattccaagattttattttccaaaaggaaaaccacgatcacaagatgaaatt
catacaacaattcagaaaatatcggaaatttgtagttgctttgatgggggaatggttcca
ttaacggaaatgggattggttgctaaagcttgcaatttgtcaatttattggaaaggagca
cttttctacgccgcggcggacgacattgatgccaaagaagtgtcagagtcctcattgata
cgaatgtggaaaaaagtgacatccactaatcacgaccaatcgtcaaggtttgttgcattg
ttgtgcaaacctacaaaaaattgtctcgattttgaagattttctacctcttttaaaagat
atcgtggattcgcatcctggtttagtgtttctaaaggacgctcctgagttccatacaaga
tatatgaacacggttattgcaagaatattctacgtcgtaaacagatcatggtcgggtcaa
atcaccgcacaagagttgagaaaaagtaactttttaacagttttatcattacttgaagaa
gaagatgacatcaacgctattactgattatttttcatatgaacatttttacgtcatttac
tgtaaattttgggaattagacacagaccatgatcttgttatcgacaaacatgatctaata
ggttatggagatggagtattatcaagcagattgatagagagagtattatcaggtgctgta
acaagatgggatacatctgaccatcaactcagcagaatgtcatatgttgattttgtttgg
ttcattttatccgaagaagataagaaatctccgacaagcattgaatattggttccgatgt
atggatctcgacggagacggagtcatatcgatgtatgaaatggaatatttttatgaagag
cagtcacaaaaattagaacaacttgatattgaaccactaccatttgaagactgcatttgt
cagatatttgacattgttaatccaaaatacccaggaagagtcagtttgaaagatttgaaa
acttgtaaaatggctcacgtgttttttgatacattcttcaatattgccaaatacctcaac
aatgaacaaaaagatcctcttgcgccacaaaataatatggatggatcaattatggcgatg
agcgattgggacaatttcgcagcagaagaatacgaaatgctcgtcgccgaagaacaatcc
acaaaattgacggatttgagcaaaattcttttggaagaagacgattcagcggatattctt
gatcgaacggaagatctatcagaaatgaaaatatcaaattcaaataatccatatatcaaa
acggaaaacaacaataatgatcagttacgagaatcttactctgataaaaagtttatcgaa
ggtgcaacaagtagttctcgtattgaaccagggacacaaatagctcagactttgatttga
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