Styela clava (leathery sea squirt): 120345554
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Entry
120345554 CDS
T07291
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120345554
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sclv01002
]
120345554
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120345554
03036 Chromosome and associated proteins [BR:
sclv03036
]
120345554
Peptidases and inhibitors [BR:
sclv01002
]
Metallo peptidases
Family M1
120345554
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120345554
Coactivators
SAGA/TFTC/STAGA complex
120345554
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120345554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
MT
Motif
Other DBs
NCBI-GeneID:
120345554
NCBI-ProteinID:
XP_039270979
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MEKAKSLRQSYQRPFKLSHQVLCITSINFSRKALMGYVELLIQPRRSDLKTIKVNSKQSR
IYKVSVNDYEAPFQYHDPSLDLTQRDPIARNLEFLKSCHCNAVNVVDPDTGYHGEVTIKL
PAEVQKLVKDQKALRISMDFTLENPNGGVQFVVPDVEGTTSEKAMHLFTYGHENSARLWF
PCVDTYSEPCTWKLEFTVDATMTAVSVGELVETVFTPDMKRKTFHYILTVPTAAPNIGLA
VGPFEVLVDKHMHEVTHFCLPQLLPLLEHTTQACYEVFEFYEEILSFRFPYSCYKQVFVD
EAYRDIESYASLGIFNTNLLHSKIILDQNPETRKQMAKMISNQFFGCFMARESWNDLWLP
TGLSAYLQGLWVKNIFGNNEYKHLIASETKKLCHYEMNVQPVTLCYNASHDSADSNTSLR
NPHTMSPKYYEMLQCKSHLVMRMIENSIGPQLLLQALNKLLSLANTSAQQKVPNSTWVAM
LLSTESFLKSINTVSGKKIDHLMNQWVYQSGVVCFKGRFTFNRKRNAVELDVKQHTGGKG
IRKYVGPLTVRIQELDGSFQHTIQVEENTTKHDIQCHSKSRRNKRKKIPLLNGEEADIDL
SAMDPDSPVLWLRIDPDLSVIRNVSFEQPDYMWQYQVRFERDIIGQAEALSVLSHFPSPP
TRKALTDILENEKYFYRVRMEAAFCMAKVANAMISSWAGPPAMLTLFTRFFFCESTPPIV
RMNNFTNLQQYFMQKTLPVAMANLRDTNNVCPKEVLHFLIDLIKFNDNSKSKVSDNYYRA
ALVEALCHLVTPTMSNPGQKVTVENLPLDVRMILEEISRFLNLEKLLPSYRYTVTVSCLK
AIQALQRNGHLPPDYVLLRSYAAHGFFVDIRIAAIEALVDKIKATSDVDQFEWLLDLCEK
DPVPEIKWRILKAFVSNPPFTKSDSQTSSLNTEHFVDKLWNFISKTTYYDSRIRCEAINL
YNILFGTHRPKCLPPKDRRPSTTISTSVGDRASSTQGPQSKLKRTASTSFTGNSHDKIKM
KIKFGNTSVDEGDEFDNADVMAAESLLSLSHSDLPTRPPTPGTDQPGSSWQTSPFVGSET
SRAIHDSHKRPSQDSAVKDKKKKKKHKHKHRHKYKDGDLSSPSSSHVGSPMNLGISDSPK
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggctaaatcattaaggcagtcttatcaaagacctttcaaactcagccatcaa
gttttgtgtataacatcaatcaatttttcaagaaaagctttaatgggatatgttgaactc
ttaattcaaccaaggagatcagatctaaaaactatcaaagtcaacagcaaacaatcaaga
atttacaaagttagtgtgaatgattatgaagctccatttcaatatcatgacccttctcta
gacttgacgcagcgtgatccaatagcaagaaaccttgagtttttaaaatcttgccactgt
aatgcagttaatgttgttgacccagatactggttaccatggagaagttactatcaaactc
ccagcagaagtacaaaaacttgtaaaagatcaaaaagcgttgcgtataagtatggatttc
actttggaaaatcctaatggaggagttcagtttgttgtgccggatgtggaaggtacaacg
agtgaaaaagcaatgcatttgttcacctatggtcatgaaaactcggccaggctttggttt
ccttgtgttgacacatattcggagccttgcacctggaaattggaatttactgttgatgcc
actatgactgcagtttctgttggagaattggttgagactgttttcacaccagatatgaag
aggaaaacatttcattatatcctcactgttcccacagctgctccaaacattggtttagct
gtcggtccatttgaagttctggttgacaaacacatgcacgaggtcacacatttttgcctg
cctcaacttctaccattgttggaacatacaactcaagcatgctatgaggtttttgagttt
tatgaagagatactaagttttcgtttcccgtattcttgctacaaacaagttttcgttgac
gaggcatatcgtgatatagaatcatatgcatcattaggaatattcaacacaaatttattg
cacagtaaaataattcttgaccaaaaccctgaaacgagaaagcaaatggcaaaaatgata
tccaatcagttttttggttgttttatggccagagaatcttggaatgatctctggttgcca
acaggcttgtctgcatatttgcaaggtctatgggtgaaaaatatatttggaaataatgaa
tacaagcacttgattgcaagtgaaacgaaaaagctttgccattatgaaatgaatgttcag
ccagttacactctgttacaatgcttctcatgattctgcggattcaaacacttctttgagg
aatcctcatactatgtcacccaagtattatgaaatgcttcaatgcaagtcacatctcgtt
atgcgaatgattgaaaattctataggcccacaactccttttgcaagcattaaacaaattg
ctatctctggcaaatacatcggcacagcagaaagttccgaattcgacatgggttgcaatg
ctcctatcaactgaaagctttttaaagtcaattaacactgtttcaggaaagaagattgat
catttaatgaatcaatgggtatatcagagtggtgtcgtttgttttaaagggagatttaca
tttaatagaaagcgcaatgctgttgagttggatgttaaacaacacactggtgggaaaggt
ataagaaaatatgttggacctttaacagttcggatccaagaacttgatggctcttttcaa
cacaccattcaagttgaagaaaacactacaaagcatgacatacaatgtcattcaaaaagt
cgtaggaataaaagaaaaaaaatacctttgttgaatggagaagaggctgatattgatttg
agtgcaatggatccagattctcctgttttatggttgcgtattgatccagatttatcagtg
attcgaaatgtaagctttgaacaaccggattacatgtggcagtatcaagtcagatttgaa
cgtgatattattggacaagcagaagctttatctgttctgtcacattttccttctccacca
actcggaaagctctaactgacatactggaaaatgaaaaatatttttatagggttcgaatg
gaggctgcattttgtatggctaaagttgctaatgccatgatcagttcctgggcaggacca
cctgcgatgctaacgttatttacaagattcttcttctgtgaatccacacctccgattgtt
agaatgaataatttcacaaatttgcagcaatactttatgcaaaagactctgccagttgcc
atggccaatttaagagacactaataatgtttgtcccaaagaagttttacattttctaatt
gatctaatcaaatttaatgataattctaaaagcaaggtttctgataactactatcgtgca
gcattagttgaagcactttgccatttagtaacacctaccatgtcaaatcctggtcaaaaa
gtaacagttgaaaacttaccattagatgtgagaatgattttggaggaaatatcaagattt
ctcaatttagaaaaattgttaccttcttatcgttatactgttacagtgtcgtgcctaaaa
gcaatacaagctttacaaagaaatggtcacttaccacctgattatgttttactgaggagc
tatgctgcacatggattcttcgtggacatcaggatagctgcaattgaggctctcgttgac
aagattaaagccacaagtgatgttgatcagtttgaatggttgctagacttgtgtgagaaa
gatccagtaccagagatcaagtggagaattcttaaagcatttgtcagtaaccctccattt
acaaaatctgacagtcaaacttcttctctcaacacagaacactttgtggataaactatgg
aatttcatcagtaagacaacatattatgattcaagaataaggtgtgaagcgatcaatttg
tacaatattttgtttggaacacataggccgaagtgtttacctccaaaagatagaaggccg
tctactactatatcgaccagtgtcggtgatagggcgtcttcaacccaaggaccacaaagc
aagctcaagcgcactgcttcaacatctttcactggtaattcgcatgataaaatcaagatg
aaaatcaagtttggaaatacttcagttgatgaaggggatgagtttgacaatgctgatgta
atggctgctgaaagtttgctttcactcagtcacagtgatctaccaacccggccaccaaca
cctggtacagatcagccaggctcgtcatggcaaactagtccttttgtcggttctgaaact
agtcgtgccattcacgactctcataaaagaccttctcaagattctgctgtcaaagacaag
aaaaaaaagaaaaagcacaaacataaacatagacacaaatataaagatggcgatttgtct
tcgccatctagttcacatgttggttctcctatgaatctaggaatatcagactctccaaaa
ctttag
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