Styela clava (leathery sea squirt): 120345666
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Entry
120345666 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120345666
KO
K03231
elongation factor 1-alpha
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120345666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120345666
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120345666
03012 Translation factors [BR:
sclv03012
]
120345666
04131 Membrane trafficking [BR:
sclv04131
]
120345666
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120345666
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120345666
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120345666
Translation factors [BR:
sclv03012
]
Eukaryotic type
Elongation factors
120345666
Membrane trafficking [BR:
sclv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120345666
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120345666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP-eEF1A_C
GTP_EFTU_D3
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
CBM_2
Motif
Other DBs
NCBI-GeneID:
120345666
NCBI-ProteinID:
XP_039271132
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MDRRSGKVLEAEPKFLKSGDAAMVRLVPSKPMCVEAFKNYAPLGRFAVRDMRQTVAVGVI
KKLPKRPGMIDVDEESIEGEMDPPVVTYIKETTFDVNFSSLTGVVAYYVTVAPRHATFAP
QTVTANTSGSVLVENLVGNTIYYVRVKGENAAGEIGPDSHATSVHTLPGPPTFTLSDPLP
TSVYIAFQLNNYARVSKWTIQYQEVASSDPSEVVTTPSGQYYQYWLSKLMPDTDYKIRAR
ASQLYGSTNISDTRYSSWQNFKTASLSIFGRVDLEDETYNSSYSNEFSDEWNATLSIITE
AYSAMNITYNEITIIEIGNNGKGNPLVFYEIKVKDKSLPSPQNYTLTGPSFSNSSINNGD
ECVGTPGIYVAALSSGTEYVFAYFNSTHPMKQDDVDIHMYITQEDGSTITIPVIFPREMS
DDSPQTSINIQSNGVISDASATVTGLLNLNSAAGLTLAFLIKDVVRKTGVKLYTRYFEAQ
SLSLPEDTVDHLFHSTVLNGSVINSEDITYASSSDGTSVTLHIPSLKKAIRYEILDSNDT
VVATLEEEEIDGSDVLKLFLLPHA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacagaagatctggtaaagtactggaagctgaaccaaaatttttgaaatctggtgac
gcagctatggtcagacttgttccaagcaaaccaatgtgtgtcgaagcgttcaagaattat
gctccgcttggtcgtttcgccgtccgcgacatgcgacagactgttgctgttggagtcatc
aagaaactaccaaaaagaccgggaatgatagacgtggacgaagaatcaattgaaggagaa
atggatcctccagttgtaacatacattaaagaaactactttcgatgtcaatttttcaagt
ctcacaggcgtcgttgcatattatgtcactgtggcgccacggcatgctacatttgctcca
caaactgtaaccgcaaacacgagcgggtctgttttagtggagaatcttgtcggaaatact
atatactatgtgagggtcaaaggtgaaaatgcagctggtgaaattggtccagacagtcac
gcaacttcagtacatacactaccagggcctccaacgttcacactgagtgatccgttacct
acatcagtatatatcgcatttcaattaaacaattatgcaagagtgtcgaagtggacaatt
caataccaagaagtggcttctagtgatccatcagaagttgtaacaacacctagtggtcaa
tactatcagtactggttatccaaactgatgccggacactgattacaaaatacgagcaagg
gcgtcacagttgtatggcagcacgaatatatcggatactaggtattcgtcgtggcaaaat
tttaaaacagcttctctctcaatatttggtcgagtagaccttgaagacgagacatataat
tcttcatattcgaacgaattcagcgatgaatggaatgcaactctttcaataataacagaa
gcatatagtgcaatgaatataacttacaatgaaataacgattattgaaattggaaacaac
ggaaaaggaaatcctcttgtattttatgaaatcaaagtcaaagacaaaagcttgccttca
ccacagaattatacgttaactggaccaagtttcagcaactcatctatcaataacggagat
gaatgcgtgggaaccccgggcatatatgtagcagcattaagtagcggtactgaatacgtc
tttgcatactttaactctacacatccgatgaagcaggatgacgttgacatccacatgtac
ataacacaagaagatggatcgaccattacaatcccagtaatatttccaagagaaatgtct
gatgatagtcctcaaacttcaataaacatacaatcgaacggagtcatatcagatgcttca
gcaactgtaactggattattgaacttgaacagcgcggcaggcctcactctagcttttctt
ataaaggacgttgtaagaaaaactggtgtgaagctgtatacaagatattttgaagctcaa
agtttatctttacccgaagacactgttgatcatctttttcactcaacagtattgaatggc
agcgttataaactcggaggatataacgtacgcctcatcatctgacggaacatctgtgacg
ttgcatataccctctctaaagaaggcgattagatatgaaatattagacagtaatgacacg
gtggttgctacattggaagaagaagagatcgatggatcagacgttctaaagctattctta
ctcccccatgcatga
DBGET
integrated database retrieval system
