Styela clava (leathery sea squirt): 120345821
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Entry
120345821 CDS
T07291
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120345821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120345821
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120345821
Protein recycling
Other Rab GTPase associated proteins
120345821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
120345821
NCBI-ProteinID:
XP_039271310
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MTSIKSLGSRKGIHLDQAELLCRNGCGFYGNYAWKGYCSKCWREHYQSQKQLQIDQDHEL
AKKLQEQENKAVTSPIANSPAQISHTPTTPPTSTAQSESTFASSTFSKFEDKKNRTRQSL
KKLFTPSPNHEDNSPTNAVSPRNNSAQKQSLSRAATFLTPISRKSPDSSRKVLRRQDRTS
MGWLSSATHERQQSYESKQASHDFMEFIKAFNEPAAKDVMKQCRSFMEKLVVNREMSVEE
QSELVQDFYQSMADRLTTHPVFSSYSSEKDQEGIMDNVEKFLMTRLYRSIFCSDHTDDES
QDLAVQKKIRSLHWITTEMLDAQLNEERVDAAAAIDKAITAIIEMDSKRAPQDKLSCITR
CSKHIFESLQLSKDDGNPASADEYLPALIYIVLKANPPLLKSNISYITRFSNPSRLMAGE
DAYFFTNLCCAVQFIDSGLNATSLQLSEEEFEDYMRGKLPPKKVAEKQTVASTENMCYGL
QLMYQNLNTLAVLQQRVDNVFADASELQKDMDVHSAFIKDSVKQELDKNRPTAEVESESA
STEMPDELLGLIQVKPSVSARLSALDMDLPTDSNLPPPLQPTTF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataaaatcacttggcagtagaaaaggaatacatcttgaccaagcagaattg
ctttgtagaaatggatgtggattctatggaaattatgcatggaagggatattgttccaag
tgttggagggaacattatcaatcacaaaaacagttacaaattgatcaagatcatgaatta
gcaaaaaaacttcaagagcaggaaaataaagctgtgacttcccccattgctaacagtcct
gctcagatatcacacacacctaccaccccaccaacttctactgcacagagtgaaagcact
tttgctagcagcaccttctccaaatttgaggataagaaaaatcgtacaagacagagcttg
aaaaaacttttcaccccgagtccgaatcatgaagataacagtccaacaaatgcagtgtct
cctagaaataattcggcacaaaaacaatccctgtctcgtgccgcaacatttctaacacca
atctcacggaaatcacctgatagcagtcgaaaagttttgcggaggcaagatagaacaagt
atgggatggctgtcttctgcaactcatgaaagacaacagagctatgaaagtaagcaagca
tcacacgattttatggaatttataaaagcattcaatgaaccagctgccaaagatgtcatg
aaacaatgtagatcattcatggaaaaactcgtagtaaacagagaaatgtcggttgaagag
cagtcagaacttgtacaggatttttatcagtcgatggcagataggcttacgactcatcct
gtgtttagtagttattcatcggaaaaagaccaggagggaattatggataatgtggaaaaa
tttttaatgacaagattgtacagaagtatattttgtagcgatcacacagacgatgaaagt
caagatttggcagtacagaaaaagattcgaagtttgcattggattacaacagaaatgtta
gatgctcaactgaatgaggaaagggtagatgctgctgctgctattgataaagctataact
gctatcattgaaatggattcaaaaagagcacctcaagacaaactgtcgtgcataacaaga
tgtagtaaacatatattcgaatctctacaattatcgaaggatgatggaaatcctgcaagt
gctgatgaatacttaccagcattgatatatattgtattgaaagcaaatccacctttattg
aaatccaatatcagttatataacaagattctctaatccaagcagattgatggcaggagaa
gacgcatacttttttacaaacctttgttgtgccgttcaatttattgacagtggtttgaat
gctactagtttgcaactatctgaagaagaatttgaggattacatgagggggaagttacct
cccaaaaaagtagcggagaagcaaactgtagcatctacggagaatatgtgctatggtcta
caattgatgtaccagaatttaaatactcttgctgttcttcaacaaagggttgacaacgta
tttgcggatgcatcagaactacagaaagatatggatgttcattcagcttttattaaagac
tctgtcaaacaggaacttgataaaaatcggccaacagcagaagttgaaagcgaatcagct
tcaacagaaatgccggatgaattactgggattgattcaggtgaaaccttctgtctctgcc
aggctctcagcactggatatggacctgcctactgatagcaacttacctccgcctttgcaa
cctacaaccttctga
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