Styela clava (leathery sea squirt): 120345839
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Entry
120345839 CDS
T07291
Name
(RefSeq) dynein regulatory complex subunit 6-like isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120345839
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120345839
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
DUF7885
F-box
LRR_At5g56370
LRR_14
LRR_RPS2
LRR_Zer-1
LRR_8
F-box_5
CMD
Motif
Other DBs
NCBI-GeneID:
120345839
NCBI-ProteinID:
XP_039271337
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MMDNLPIEIWSEILKYLNLADRRECALVCKKFYEASLDPDLHWKSTYIFDAQALLPQDEF
TEAAFDNQIYCKSPNLYINGLDENINVKPLLNPQNGHMSLLGPHVVRLSLKGSSILESSF
VEILNKCDSLESLDITSCNAMFMSGSFLAQSDRHFVVAKVLEKTVDLNLSSIRYMNDDIL
KKFYSLCPSLSSIKLACCNILFSEFGSTQRFALTFPCIVQLASVQCSTLTRIDLSRTGIT
NFALAKLSSIKGLKLKEVVLKNCRELGDAGVSSLAKQQPDLRVIDIRSCCEVGNAGVSAI
CTSSHNLRELYLAKCRKVTDISASKISFLEKLEILDISECYDITTTSISVILTLLTALST
LIANGCNFAKFHTWISKNQQQNEISEKKVPLSLIPKDCFQYLNLTKLSINSGKHVTDLTI
QSIFVYLTNLKQLSLSWCHYITDRGLLGLNITITDGMTFPNVKDTEAHILSTGRYSRNHS
RIGFLGSPGAEYISYVDWSEVDVKSSLPERGITRLRKLQRLSMSNCPNVTDESLVRIFCV
GQPVFPKMEHLELNMMQRSITNDVVNGITIGCPLLTYLAMSGSNISNDGVAGITQRLHRL
EKLDLSNCDNITPKFFHGLIKNNRWLRELDISSCKQIPESSADKLKKSLPLLARVHTRYS
GV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgatggataatttgccgattgagatttggtcagaaatattgaagtatttgaatcttgcg
gatcgtagagagtgtgcactggtttgtaaaaaattttatgaagcaagtttggatccagat
ctacattggaaatctacctatatttttgatgcacaggcattattaccacaagatgaattc
actgaagctgcttttgacaaccaaatttattgcaaatcaccaaatctttacattaatggc
ttggatgagaacatcaatgtgaagcctctgctcaaccctcaaaatggacatatgtccctt
cttggacctcatgttgtacgtctttctctgaaaggctcatctattctagaaagcagtttc
gttgaaatattgaataagtgcgactctcttgagtctctggacataacaagttgcaatgca
atgtttatgtcaggatcgttcttagctcaatctgatcgacacttcgttgttgcaaaagtt
ttagaaaaaactgtggatttgaacttgtcatcgataagatatatgaatgatgatatttta
aaaaagttttattctttgtgcccgagtttgtcttcaatcaaattagcatgttgcaatatt
ttattcagtgaatttggaagcactcaacgatttgcattaacattcccttgtattgtacaa
ttggcatctgtacagtgttcaactctaactcgaattgatttgagtcgtactggaatcaca
aattttgctttggcaaaattatcttccattaaagggttgaaactaaaagaagttgtgctc
aagaattgtcgagaactgggtgatgctggagtaagttcattagctaagcaacagccagat
ttgagagttattgatattcgtagttgctgtgaagttggtaatgcaggtgtttcagcaatt
tgtacctcctctcataatttgagggagttgtatctcgctaagtgcagaaaggtaacagac
atatcagcatcaaagatttcatttttggaaaagttagaaattcttgatatatctgaatgt
tatgatataaccacgacaagtatttctgtaattctgactctgcttacagcactttctacc
ttgattgcaaatgggtgtaattttgcaaagtttcatacctggatatctaaaaaccagcaa
cagaatgaaatcagtgagaaaaaagttccactgagtcttattccaaaagattgcttccag
tatttaaacctcactaaactgagcatcaattctggaaaacatgtaacagatttaactatt
cagagcatatttgtgtatctcacaaatcttaaacaactatccttatcctggtgccactat
atcactgacagaggattgcttggactcaacattactataactgatggaatgacttttcca
aacgttaaagacacagaagctcacatactcagtacaggaagatattcgagaaaccatagt
cgtattgggtttttaggcagccctggtgcagagtatattagctatgttgattggagtgaa
gttgacgttaagtcaagtttaccagaaagagggattacaagattgagaaagctgcaacgt
ctgtcgatgtccaattgccctaatgttactgatgagagtctcgtcagaatattttgtgtg
ggtcaaccagtatttcctaagatggaacatcttgaattgaatatgatgcagagatcaata
acaaatgatgttgttaatgggattactattggatgtcccctgcttacatatcttgccatg
tcaggatctaatatttctaatgatggtgtagctggcataacacaacgtctccatcgttta
gaaaaacttgatctgtccaactgtgacaatattactccaaaattctttcatggactaatc
aaaaacaacagatggttgagagaattggacatatcatcatgtaaacaaattccagaatca
tctgcagataaactgaaaaagtctcttccattacttgctcgtgttcacactcgctattct
ggtgtataa
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