KEGG   Styela clava (leathery sea squirt): 120345845
Entry
120345845         CDS       T07291                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-dependent kinase 7-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03022  Basal transcription factors
sclv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120345845
  09124 Replication and repair
   03420 Nucleotide excision repair
    120345845
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sclv01001]
    120345845
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sclv03021]
    120345845
   03019 Messenger RNA biogenesis [BR:sclv03019]
    120345845
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120345845
Enzymes [BR:sclv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     120345845
    2.7.11.23  [RNA-polymerase]-subunit kinase
     120345845
Protein kinases [BR:sclv01001]
 Serine/threonine kinases: CMGC group
  CDK family
   120345845
Transcription machinery [BR:sclv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120345845
Messenger RNA biogenesis [BR:sclv03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     120345845
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120345845
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Seadorna_VP7 Kinase-like
Other DBs
NCBI-GeneID: 120345845
NCBI-ProteinID: XP_039271348
LinkDB
Position
Unknown
AA seq 361 aa
MTDKTFRYEKVEFLGEGQFATVYKAKDTENDNRIVAVKKIKLGNRIEAKDGINRTALREI
KLLQELHHENIIGLLDVFGQKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYTIMTLK
GLEYLHSQWILHRDLKPNNLLIDAEGILKIGDFGLAKSFGSPSREYTHQVVTRWYRCPEL
LFGARLYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLSKIFETLGTPKEVEWPGMTAL
PDYVSFKEFPGFPLKECFTAASDELLQVISGLLRYNPGTRSTAKQTLQMSYFSSPPHPTP
GHRLPLPSSCQVQAQLNSKAGTKRKRDEKMDAGIDIYKVQSNKLEETKRVRAGVLAKRLV
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacagacaaaacctttagatatgagaaagtggaatttcttggagaaggtcaatttgca
acagtatacaaggctaaagatactgaaaatgacaatagaattgttgctgtgaagaaaatt
aagctgggaaatagaattgaagcaaaagatgggattaatagaactgccttgagagagata
aagttattgcaagaactacatcatgaaaatatcattgggcttttggatgtatttggacaa
aagtcgaacatcagtctagtgtttgatttcatggagactgatttggaagtaataattaag
gacacaagtattgtactgacccagagtcacattaaagcttacacgataatgacattaaaa
ggcctggaatatctgcattcacaatggattttgcacagggatttgaagcccaacaattta
ttgattgatgcagaaggaattttaaaaattggtgattttggtttggctaaatcatttgga
agtccaagcagagaatatacacatcaagttgttacgagatggtacagatgtccagagcta
ctttttggggctcgtttgtatggtgttggtgttgatatgtgggctgttggatgcatccta
gcagaacttttacttagagttccgtttctacctggagattctgatctagaccaactaagt
aaaatatttgagacacttggaacaccaaaagaagttgagtggccaggcatgacagcattg
ccagactatgtcagtttcaaagagtttcctggttttccattgaaagaatgtttcactgcg
gcttctgatgaattacttcaagtaatatctggtttgctgagatataatcctggaacaaga
tcaactgctaaacagacattgcagatgtcatactttagttctccaccacatcccactcct
ggtcatagacttccattaccatcctcttgtcaagttcaagcacagttaaatagtaaggct
ggaacaaagcggaaaagagatgagaaaatggatgctggcattgacatttataaagtacaa
tctaataaattggaggaaacaaagagggttagagcaggtgtactagcaaaaagattggtt
ttttga

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