Styela clava (leathery sea squirt): 120346009
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Entry
120346009 CDS
T07291
Name
(RefSeq) nuclear factor of activated T-cells 5-like
KO
K17335
nuclear factor of activated T-cells 5
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120346009
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120346009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
120346009
NCBI-ProteinID:
XP_039271573
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MSLISQPDPSDLGEESHLGGAVDDDVLNEDYFATNNLDTLSDINKQISNDTVSMTGESRD
GFETIKPEKRLPETCDPQVYVDEETRMFCNQSPDVINSPRDIVSPADRGELSSPFSAKES
DDMETGFDDASLSAPGDAVRRPTGFFGASTPLEYTTTPGASSSACDDNYESSGSRKKRRK
TRRDMYASIPSYGNTRLNGPLRFPKPANSTQAGEMWYHDPDTSPFSPPTCPKNMNFNFGE
SSSRRSSSGTPAMPAFKAEYDVENAKRSKTCGNEIEILDSNNIKTEAMSNNNDTPVTSNT
NGTRRRNTHHRATGITTESEPILSRQYPRKAEHLELKILVQPESQHRARYLTEGSRGPVK
DTSQQGYPKVQLIGYRGSVMPILQVFVANDSGKVKPHGFYQACRVTGRNTSSCEEMEIDG
THVIEIPFKQDDDMTLNVDCVGILKLRNTDVEVRTGLRNQKRNQSVRLAFRVSVKNVITN
STKSMVTLQCTSKCISCTQPLGQPEITKKSIDRCSVEGGTEMFIIGKNFHRGTRVIYQDP
EEPNGTQWSAEGEVDKDTFHQSHMVVRVPAYHDLNIVKPVNVQLLVEFQDKKCEPHIFTY
TPRKEPELPKEEQKKQTADNSNPALNMSLLDGPIDRKFLAALFSKLLAGGITSQSDLPSA
DTHEIPKPEVQIPQGNPPLLTATSLLQNQLSNHILPNAALQSNTIEAKPTMFNLPAGISP
MQNESILQQDAASNPTPSQIINPNALINVLGSISNANTNPVQINTNVTISDPNLKVKHEQ
YDSAPIPVAAITPQVIPQVAQAVPPPVLLANILPSTVQVSQPVTFISQIPTTSPLAMVTS
PVSKPSIAQPLSTPGVVMFHSFTNADSVMQVNIEPAYTKPTGSLVGGNIVAARIDAQNEP
QPAIQQTHQNLFSVRVPQNATFGSDATKQNVFGNISTEILQQNSFKNPAQSAAPQLVAST
GIGLQNVTFGTAGTGLQPASQLGSFSYPTTFNNVKESQNVIHNQQNVDGNVNMQTSQDTN
QPTFGDVGQGMQQIAQQTIPTFTNVAQQKFSAGLQPQTQIHQNVAFTNKTAQQSLYDETT
QQFSINEQQIQSHFTDNPLHFTAGTQEQTNFNASTQQFSTGNQQQTSYEAPKHQFTVGGN
QQIFNQQPQPVFSDPKLQFTVVTQHSTISQNCFNTKPQFSVANQQPEMQTSTAFSAVTQQ
LFQSNTQQNTMLQNQPSFSVASYQQQQKPQTDFTIEKKQFSLDHNQHSQHGINQSKQQQA
LITDQTMNLQQQQPVMQQQPQMTDIMHGIQNQNSQTQSNQSQHISSDTKMHVDMYVSDVP
KDVTMQLAPAALQQTDTFNAQVTSQMSGVANVMENHPMEDVGSTQLSQIATGQTQQASTA
QPVFHTDQASGLLNTEIPVQNQTFQSPQQSTTNIQMTNAQFTLQPQEVKMISTSIALGNF
SNTNTESIQPAMVTMSMPSQVFHPQPVVETMATQTMATANTMQTQNYTQQITTQPSQDMM
TNQVGQHQTQQQVYQPPSQVQSPHQQTPTLSPLQIQQSDYTYSPTNPSTIQTCNNNDSGT
MLQPQPTNSSRGLEHGPNLFAMDQLLQSIDAEKLASITGEDVQRQFQ
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaattagccaaccagacccctcagatttgggagaggaatcccatcttggggga
gcagtggatgacgatgtactcaatgaggattattttgccacaaataatttggacacttta
agtgatataaataagcagatttccaatgacactgttagtatgacgggagaaagcagagat
ggatttgaaacgattaagccagagaaacgattgcctgaaacttgcgatcctcaggtttat
gttgatgaggaaacaagaatgttttgcaatcagagtccggatgttattaacagtcccagg
gatattgtaagccctgcagatcgtggagaattaagcagcccgtttagcgctaaggaatct
gatgatatggagacaggttttgatgatgctagtttatctgccccaggagatgccgtacga
agaccaacaggtttttttggtgcttcaactcctctggagtataccactactcctggtgcg
tcttcaagtgcttgtgatgacaattatgaatcgagtgggagcagaaagaaacgtagaaaa
acgcggagagacatgtatgcatctattcctagttatggcaacacaagactgaatggccca
ctaagatttcccaaaccagcgaattcaactcaagcgggagaaatgtggtaccatgacccg
gacacatctcctttcagtccaccaacttgtccaaaaaacatgaactttaactttggagaa
agtagtagccgtaggagctccagtggaacccctgctatgccagcatttaaagctgagtat
gatgtagaaaatgctaaacgatctaaaacatgcggaaacgagattgaaattctggacagt
aataatattaaaactgaagctatgtcaaataataatgatacacctgttacaagcaacaca
aacggcacgagacggaggaatacgcatcacagggcaactggtataacaactgaaagtgag
cctatcctatcaagacaatatcctcgcaaagctgaacatttggagttgaaaattttggtg
caaccagaatcacagcacagggcgaggtatcttacagagggcagtagaggtcctgtcaaa
gacaccagccaacaagggtacccgaaagtgcagcttattgggtatcgtggatctgtcatg
ccgattttgcaggtttttgttgcaaatgattcaggaaaagtgaagcctcatggattctac
caggcatgccgtgttactggtcggaatacgagttcttgtgaagagatggaaattgacggc
actcatgtgatcgaaatccctttcaaacaagatgatgatatgacattaaatgttgattgt
gttgggatattaaaactccgaaatacagatgtcgaagtacgtactggcttacgtaatcaa
aaacgaaaccaaagtgttagacttgcgtttcgtgtgtctgtaaaaaatgtaataacgaac
tccacaaaaagtatggtgacactgcaatgcacttcaaagtgtattagttgcacgcaacca
cttggtcagccagagatcacaaagaaaagtatagatcgatgctcagttgaggggggcaca
gaaatgttcatcattggtaaaaacttccatcgaggaaccagggtgatctatcaagacccg
gaagagccaaatggaactcagtggtctgcggagggagaggttgataaggacactttccat
caatctcatatggtagtcagagttcccgcttaccatgacctaaacatagttaaaccagtt
aatgtacaactgttggtagaatttcaagacaaaaagtgtgagccacatatcttcacctat
acaccacgaaaagaaccagagcttccgaaagaagagcaaaagaaacaaactgcagataac
tcaaatccagctcttaatatgagtttattggatgggccgattgatcgtaaattccttgct
gcgttgttttcaaagttacttgctggtggaataacatctcaaagtgatttgccaagtgca
gatacacatgaaatccccaaaccagaggtgcaaatacctcagggcaatccacccctgttg
accgcgacatcattattacaaaaccagttatccaaccatattttacccaacgcagcttta
caatctaacaccatagaggctaaacctactatgttcaatcttcccgccggcatttctccg
atgcaaaatgaaagtattttgcagcaagacgcggcatcaaaccctaccccttcccaaatt
attaaccccaatgctctaattaatgtattaggttctatttctaatgctaacactaaccct
gtgcagattaatacaaatgtgaccatttcggacccaaatttgaaagtaaaacatgaacaa
tatgacagtgcaccaatccctgtggccgccatcacaccgcaagtcatcccacaagttgcc
caagcagtacccccacctgtgctgcttgcgaatattttaccatctacagtacaagtgtca
caaccggtcacttttatatcacagattccaacgacttctcccctggctatggtgacaagc
cccgtttcaaaaccgagcattgctcaaccactttcgactcctggtgtggttatgttccac
tcatttaccaatgcagacagtgtaatgcaagtaaacattgaaccagcttatacaaaacca
actggctctctagtcggtggaaacatagtggctgcaaggatcgatgcccagaacgaacca
caaccagcgatacagcagacccaccaaaacttattctctgtgcgagttccacaaaatgca
acttttgggtctgatgctacaaagcagaatgtttttggaaatatatcaactgagatatta
caacaaaactcgtttaaaaatccagcgcagtctgcagccccacagctggtagcttctact
ggtataggcttacaaaatgtcacattcggaactgctggtactggattgcaacctgctagt
caactgggatctttctcttatccaacaacatttaataatgtgaaagaatctcagaatgta
attcacaaccaacaaaatgtagacggtaatgttaacatgcagacatcacaagacacaaat
cagccaacttttggagacgttggacaaggaatgcagcaaatagcgcagcaaacaataccc
acattcaccaatgttgcgcagcagaagttttctgctggtttacagccacagactcaaata
caccaaaacgtagctttcacaaacaaaacagctcagcagtctttgtacgatgaaacaaca
cagcagttttctatcaatgagcagcagattcagtcacacttcactgacaatcctctacat
tttactgctggcactcaagaacagaccaatttcaatgcatctactcaacagttttcaact
ggaaatcagcaacaaacgagttacgaggctccaaaacaccagtttacagtcggtggaaac
cagcagatattcaatcaacagccacagccggtatttagtgatccaaaactccaatttact
gttgtgacacagcactctaccatttctcagaattgcttcaatactaaaccacagttttca
gttgcaaatcaacaaccagaaatgcaaacttctactgcttttagtgctgtcactcagcag
ctatttcaaagcaatactcaacagaatacaatgttacaaaatcaacccagcttcagtgtt
gccagttatcaacaacagcagaaaccgcaaactgattttacgattgaaaagaaacaattt
tcgcttgaccataaccaacattcgcaacacggaattaaccaaagtaaacagcagcaagca
ttgattaccgatcagaccatgaacttacagcaacagcagccagtcatgcagcagcaaccc
cagatgacagacatcatgcatggtattcagaaccagaattcccagactcaaagcaatcag
tctcaacatatatcatcagataccaaaatgcacgttgatatgtatgtctctgatgttccg
aaggatgtaaccatgcaacttgccccagcggctttgcaacaaactgacacattcaatgct
caagtcacttcacaaatgtctggagttgcaaacgtaatggaaaaccatccaatggaggat
gttggttccacccagcttagccaaatagcaactggtcaaacgcagcaggcatctactgca
caacctgtttttcatacagatcaagcatccggtttattaaatactgaaataccggtacaa
aaccaaacgtttcaaagcccacaacagtctaccaccaacatacaaatgaccaatgctcaa
tttactttacaaccacaagaagttaaaatgatttcaacttcaatagctttgggaaatttc
tctaacacgaatacggagtctattcaaccagctatggttacaatgtcaatgccgtctcag
gtattccatcctcaaccagttgttgagacaatggcgacccagacaatggcaacagcaaac
acaatgcagacacaaaattatacccaacagatcactacacaaccttctcaagacatgatg
acaaaccaggtaggtcagcaccagacacagcagcaagtttaccaaccaccgtcccaggtc
cagtctccgcatcaacagacgccaactctttcaccgttacaaattcaacaaagtgattat
acatattcccccactaatccatcaacaatacagacgtgtaataacaatgatagcggtacg
atgttgcaaccgcaacccacgaattcgagtcgaggcttggagcacggaccaaatttattt
gcaatggaccaattgcttcagtctatagatgctgaaaaattggcttcgataacaggagag
gacgttcaacgccaattccaatag
DBGET
integrated database retrieval system
