Styela clava (leathery sea squirt): 120346167
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Entry
120346167 CDS
T07291
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00310
Lysine degradation
sclv00514
Other types of O-glycan biosynthesis
sclv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120346167
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120346167
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120346167
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120346167
Glycosyltransferases [BR:
sclv01003
]
O-Glycan biosynthesis
O-linked Gal type
120346167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120346167
NCBI-ProteinID:
XP_039271769
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MLTNTISIIFILCIGFVKIQRTTCMLEDTTAYEEKARDRMLRGAKNIKSKIGEKTILVAI
FVRNKEHSLPYFLRGLEDLKYDKELMWLWIVSDHNRDNSTKQLEAWVEVFKDKYAKIEFE
KPDLPVEYNEQRSDLDWTNDRYIRLLKLRQFALNKARKIDVDFILYIDADNILMNPYTLN
YLTEKSETIIAPMLNSNTDYSNFWGGVDEEGHHEENDLYEEIRTREQTGTYYVPLVHSTF
LINLRNEDSENVRFLPIPPCYDYNFNDNMIFRYQCDLKGVHMYIDNSVFYGYLPEPQHND
EDLEDETYNFLRMRMDAMTKPPKGVGISLRKSFHVRDKNVIADLLVDHVFVVSLERMRDR
RLRMTRSFAMYGINYTLFEAVDGEKLNKSYLDSLGIKVLPGYKNPDDDSNITVGEIGCFL
SHYFIWKEILEKKYESTIIFEDDIRFKPKFIQKFKQVMEKVRKEKISWDFIYLGRQRVEE
KGPEELVILENDSGPNLVKADFSYRTISYVISYAGAKKLIDAEPLSKIIAVDEFLPVMYG
KQPLAYINDYFPTKNLNALAFEPTIVKQTHYANDDHFISETSFSKLVSDILD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaatacaattagcatcatattcattctctgtattggctttgtgaagattcaa
cgaacgacatgtatgttggaagatacgacagcatacgaagagaaagcaagagatagaatg
ttaagaggtgctaagaacattaaatcaaaaataggtgaaaaaacaatacttgttgctata
tttgtacgaaataaggaacattcgttgccatatttcctacggggacttgaagatttgaaa
tatgataaagaactgatgtggctgtggattgtttctgaccataatcgagataactccaca
aagcaactggaagcctgggtagaagttttcaaagacaaatatgcaaagattgaatttgag
aaaccagatttaccagttgaatacaacgaacaaaggagtgatttagattggacaaatgat
agatacattcgactgcttaagctgagacaatttgccttgaacaaagccagaaagattgat
gtcgatttcattttatatattgatgctgataatattttaatgaatccatacactttaaac
tacctcactgagaaatctgagacgatcattgcacccatgttgaactcaaataccgattat
tctaatttttggggtggtgtagacgaagagggtcatcatgaagagaatgacttgtacgag
gaaataagaactcgtgaacaaactggcacttattatgttccattagtacattcgacattc
ctgataaatttgagaaatgaagattcggaaaatgttagatttttaccaattccaccctgt
tacgactacaattttaatgataacatgatttttcgttaccagtgtgatttaaagggcgtt
catatgtatattgacaattccgtcttttatgggtatttaccagaaccacaacacaatgac
gaagatctagaagatgaaacttacaattttttgagaatgaggatggacgctatgacaaaa
cctccaaaaggcgttggaatatcattaagaaagtcttttcacgttcgagataagaatgtt
atcgccgatttactagttgatcatgtatttgttgttagtttagaacgaatgcgcgatcgc
agattacggatgaccagaagcttcgcaatgtatggaatcaattacacattatttgaggct
gttgatggagagaaactaaacaaaagttatttggatagtctcggcatcaaagtacttcca
ggttacaaaaatccggatgacgatagcaatataactgtgggtgaaattggctgcttcttg
agtcattatttcatttggaaagagattttggaaaagaaatacgaatctactattattttt
gaagacgatattagattcaaaccaaaatttatacaaaaatttaaacaagttatggaaaaa
gtaagaaaagagaaaatctcatgggattttatttatttaggaagacagcgagtggaggag
aaaggaccggaggaactcgtgatattagaaaatgacagtggtcctaacttggtgaaagca
gatttttcttacagaaccatatcttacgtgatatcctacgctggggcaaaaaaattaatc
gatgccgaaccgttaagtaaaatcattgcagtggatgagtttcttccagtcatgtatggt
aaacagcccttagcgtatatcaatgattattttccaacaaagaatctcaatgctcttgca
ttcgaaccaaccattgtgaaacagacacactatgctaatgatgatcattttattagcgaa
acctcattttcgaaattggtcagtgatatcctggattag
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