Styela clava (leathery sea squirt): 120346200
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Entry
120346200 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04137
Mitophagy - animal
sclv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120346200
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120346200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120346200
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120346200
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120346200
Multi subunit Ring-finger type E3
ERAD complex
120346200
LMBR1L-GP78-UBAC2 complex
120346200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
CUE
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_16
zf-RING_5
zf-ANAPC11
TRC8_N
DUF6062
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120346200
NCBI-ProteinID:
XP_039271813
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MPSSFVLRRIPVMLPSIQLYTVASILLLVLVVFWADKEHTRMNSKQSENPSMTVDKFHTH
QQPDVEMSSVPERGMFGISYVQGVVIIMLDEPLTLGVLINAAYCLFALGAKFILKVVFGN
LRVVERQHIKDKFWNFVFYKFIFVFGVMNVLTLNEVLLWVGWYTAIAALLLLTKLSKDRF
DFLSFSPNTPTQFHWKVVGLLCLVMCCGVGLSWTCLSRKQPFYPISQEFHSLIFMLSECV
IIMVKALHVLMRYGIHLYDIRREDLWEQKATIVYHTDLFMELLSLTVNFIHHLHMLFSGN
IWLSMASLVICMQLRYIFSEIQKRIRRHKNYCRVVANMEAKFAQATSEELRENEDSCAIC
WDIMDSARKLPCGHLFHSGCLRSWLEQDTTCPTCRKQLDVRNSNNADRNQEANQPAENDG
NNGAENRVNNEHQNHFWHFDGSRFASWLPSFSLEVTHTPVMAARGGTNFRTLNSVNQTTG
NSQLDNMAREVQAIFPQIPLNVILNDLRITRSVETTTDNILEGRVSVPTNAVISGLPHQQ
PRMPLESLQLLRQLSAVAAHARVGQQIPNFRQQMNYQNSPASNFGLHSPASESSFSNSVN
TANTSGETAEPVVHSDVNLQRQYQSDLENLQLRHRVTTSHPEDLPSTSNITKNNNNVITS
NSTTPTNVDENAPSSSLSVNDPSPAKSMSLLTHFPKDPAEREQLLKQRKALLLRQAQEKF
LKSNQDLVRRPPTPPSVPNINAYPLLNIRNLFTGSSNHSAMPNSLSYVERPTHEMLFNST
NVLRSNTNSGNDSFYEDETD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtcttttgtccttcgaaggatacctgttatgcttccaagcatacagctatac
acagtagcaagcattctattgcttgtattagttgttttttgggctgataaggaacacaca
agaatgaattcaaaacaatcagaaaacccatcaatgactgttgataagtttcatacacat
caacaaccagatgttgaaatgtcctctgttcctgaacgaggcatgttcggtatatcttat
gttcaaggagttgtaataatcatgctcgatgagccccttactcttggtgtgttaatcaat
gctgcttattgtttatttgcacttggcgcaaaatttattctcaaagttgtatttggaaac
ttgagagttgtagaaagacaacatattaaggacaaattctggaactttgtattctacaaa
ttcatatttgtgtttggagtgatgaatgttcttacactgaatgaggtcttattatgggtc
ggttggtataccgcaattgcagctttgcttcttctcacaaagctatctaaagacagattt
gattttttatcattttctccaaacactccaacacagttccactggaaagttgtcggtctt
ttatgcttggtgatgtgttgtggtgtaggtttatcatggacttgtctttctcgaaaacaa
cctttttacccaatatcgcaagaatttcactctttaatattcatgttatctgaatgtgta
atcataatggtaaaagctctccatgttctcatgagatatggaattcacttgtatgacatt
cgccgtgaggatttgtgggagcaaaaagcaactatagtttaccacactgatttgtttatg
gaactactttctctcacagttaatttcattcatcacctacacatgttgttctctggaaat
atttggctgtcaatggcaagcttggttatctgtatgcagcttcgttacatattctcagag
attcaaaaaagaataagacgtcataaaaactattgcagagtagttgcgaacatggaagcc
aagtttgctcaagcaacatccgaagaactaagagaaaatgaggacagttgtgcaatttgt
tgggatataatggattccgccagaaaactaccatgtggacatttatttcatagtggttgc
ctgcgatcttggctcgaacaggatacaacatgtccaacatgcagaaaacaacttgatgtt
cgtaactccaacaatgcagatagaaatcaagaggcaaatcaacctgcagagaatgatggc
aataatggagcagaaaatagggtcaacaatgaacatcaaaatcatttctggcattttgat
ggatcgaggtttgctagctggttgccaagtttttcactggaagttacacacacaccagtc
atggctgcaagaggcggtaccaattttcgtactttaaattccgtcaaccagacaactgga
aattcgcaacttgataacatggcaagagaggtgcaagctatatttccgcagattccattg
aacgttatattgaatgatctgagaataacaagatccgtggaaaccaccacagataatata
ttggagggaagagtttccgtaccaaccaatgctgtgatttcgggacttcctcaccaacag
ccaagaatgcctcttgaatctctacagttactcagacaattatctgcagtagctgcacac
gctcgagtaggacagcagatacccaattttcgacaacagatgaactatcagaattctcct
gcgagtaactttggtttacattcacctgcaagtgaatcttcattttctaattccgtaaat
actgccaacacttcgggagaaactgcagaaccggttgtgcattccgatgtaaatctccag
cgacagtatcagtcagatttggaaaatctccaacttcgtcacagggttactacctctcat
ccggaagatttgccatcaaccagcaatataacaaaaaataataataatgtgataacctcg
aattctacaacccccactaatgtggatgaaaatgcgccatcatcttcattgtcagttaat
gatccatcacctgcaaaatcaatgtcactattgacacactttcctaaagatccagcagaa
cgtgaacaattactaaaacaacgaaaggctttgcttcttaggcaagcacaggaaaaattc
ctgaaatccaaccaagatttagtgagacgtccacctactcctccatctgtgccaaacata
aacgcataccctttgctaaatattcgtaatcttttcacaggtagcagtaatcactctgcc
atgccaaattcgttatcatatgttgaaaggcctactcatgaaatgctgtttaattcaacc
aatgtcttgcgaagcaatacgaatagtggcaatgattcattttatgaggatgaaaccgac
tag
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integrated database retrieval system
