Styela clava (leathery sea squirt): 120346206
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Entry
120346206 CDS
T07291
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04136
Autophagy - other
sclv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120346206
04136 Autophagy - other
120346206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120346206
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120346206
Membrane trafficking [BR:
sclv04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120346206
Others
Specific organelles associated proteins
Auto phagosome
120346206
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120346206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
ATG16
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IP5PC_F
RMC1_N
WD40_RFWD3
TMF_DNA_bd
PROPPIN
CCDC113_CCDC96_CC
Beta-prop_LRRK2
XisH
DUF3439
Phage_GP20
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120346206
NCBI-ProteinID:
XP_039271824
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MTEPDFREIIFKKLKERNEANDRFADLIQSHNQLFEEVAGLRHDNFQLNIQLEKLKQDNL
DLQVKAEAGGGAEKSERYVAIEQKLFRAQEELTEVHRTKGANAQQLYNLNLALQENEKEK
NVANDRLREKDEEIKKFKEELENLNQKYDELFQGNQTLRDEHNALHLMCNQLETKLRDSQ
SENSDLVQKLLEIKNLQAEQIEKERANVNMNKKNSMTATSTTTTTSVSTALPTTTSNGSP
PSADGSPQKRSGFPFSRFGEAVSDFFRPKPVARTTSQETGIETPRSPAHQGCLYVTLPSR
SRCKWKAHEGEVSSVKFSASGEILATGGSDKVVRLWSVVGEKCMMEHTLRGCNGGITNID
FDPQEQLLIACSSDYAVRLWTMSIQRLKLTLTGHQGKVLSARYLGYGHRLVSGSNDRTVK
VWDLKSGSCVKTYLAGSSCNDVVTTDQSGECVASGHFDRKLRFYDTRSGSSATSEMSLGG
RITSLDTPLDKNYVVCCTKDHTLEIIDLRKRSVLHSLSHDYFKVATDYSRCAFSPSGEYV
AVGSSDGTLLVWNASSGDLETTVHEHDDPVISCSWNGGNLITGDKARNCILWTDV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccagattttcgtgagataatcttcaaaaaactcaaagaacgaaatgaagca
aacgaccggtttgcagatctcatacaatcacataatcaattatttgaagaagttgctgga
cttcgacatgacaattttcaacttaatattcagctagaaaagcttaaacaagataatttg
gatttacaagtgaaagctgaagcaggtggaggagctgagaaaagtgaacgatatgttgcg
atagaacagaagttatttagagctcaagaagaattaaccgaagttcatcggacaaaagga
gcaaatgctcaacaactttataatttaaatcttgctttgcaagaaaatgaaaaagaaaaa
aatgttgccaatgatagattacgagaaaaagatgaagaaatcaaaaaattcaaagaagaa
cttgaaaatcttaatcaaaaatatgatgaattatttcagggaaatcaaacacttcgagat
gagcataatgctctacatttgatgtgcaatcaactggaaacaaagcttcgagatagccaa
tcagaaaattctgatctcgttcaaaaattacttgaaataaaaaatttgcaagcggagcaa
attgaaaaagaaagagccaatgttaatatgaataaaaaaaattctatgactgctacatcg
acaacaacaacaacatctgtatcaacagcattacctaccactaccagcaatggatcacct
ccatccgcagacgggagtccacagaaaagatctggttttcctttctctaggttcggagaa
gctgtttcagatttcttcagaccaaaaccagtagcaagaactacatctcaggaaacagga
atagaaactcctaggtctcctgcacatcaaggatgtctttatgtcactttaccctcaaga
agtagatgtaaatggaaagctcacgaaggagaagtatcttctgttaaattttcagcatct
ggtgaaatactagcgactggtggttctgataaagtagtcagattatggagcgttgtggga
gaaaaatgcatgatggagcacacactacgaggttgtaatggtggaataactaatatagat
tttgatccacaggaacaattattaattgcgtgttcgagtgattatgcagtacgattgtgg
acaatgtctatccaaagattaaaattgacattaactggtcatcaaggcaaggttttatca
gcaagatatcttggttatggtcaccgtcttgtctctggcagtaatgatagaacagttaaa
gtttgggatctaaaaagtggttcctgtgttaaaacatatcttgccggttcttcatgtaat
gatgttgtcacgacagatcaatctggtgaatgtgttgcaagtggtcattttgataggaaa
ttaaggttttatgacacaaggtctggttcatcagcaacttcagaaatgtcgttaggtggc
agaatcacttcactggatacaccactcgataaaaattatgttgtctgctgcaccaaagat
catacattagaaattattgacttaaggaagagatcagtgttacacagcctgagccatgac
tacttcaaagttgcaacagattattcgagatgtgcgtttagtccaagtggagaatatgtt
gctgtcggatcttctgatgggacgttacttgtatggaacgcctcaagtggagatttggaa
accactgtgcatgagcatgatgatcctgttatatcttgctcatggaatggtggaaatctt
atcactggggataaagcacgaaattgcattttgtggacagatgtatga
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integrated database retrieval system
