KEGG   Styela clava (leathery sea squirt): 120346330
Entry
120346330         CDS       T07291                                 
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
  KO
K15078  structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120346330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120346330
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120346330
SSDB
Motif
Pfam: SLX1_C GIY-YIG zf-HC5HC2H zf-HC5HC2H_2 zf-RING-like zf-RING_2 C1_2 PHD PHDvar_NSD T5orf172 PHD-1st_NSD Prok-RING_1 Baculo_IE-1 PHD_NSD CBP110 zf-ANAPC11 zf-rbx1
Other DBs
NCBI-GeneID: 120346330
NCBI-ProteinID: XP_039271974
LinkDB
Position
Unknown
AA seq 282 aa
MVHQIENFFGCYLLYCKNPKYKGRTYIGFTVNPKRRIAQHNAGKHKGGAWRTSGRGPWDM
TLIVHGFPSDIAALRFEWAWQHPEASRRLKHVTRKSRKETAYQYRVRILSHMVCERPWSI
LPLTVRWLKQEYYTELCPTPPSHIPLAFGPVDVKMPTKCQKKKTDIVNTKDPETDHTEYT
SLLERMEQKLKDLKDADTMAASATHIKCSLCKESITEGSALKCVEQCSSSFHIHCLAEDF
LKDKLHEIIPVEGFCPICKELLLWGDLIRKSKGFYQYLGEDL
NT seq 849 nt   +upstreamnt  +downstreamnt
atggtgcatcagattgagaacttttttggttgctacttactgtattgcaaaaacccaaag
tataagggacggacttacattggtttcacagttaatcccaagagaagaatagctcaacat
aatgctggaaagcacaagggtggagcatggcgcaccagtggtagaggaccatgggatatg
acactaattgttcatggatttccatcagatattgcagcattaaggtttgaatgggcctgg
caacatcctgaagcatcaagacgactcaaacatgtaacaagaaagagccgaaaagagact
gcatatcaatacagagtgagaatactttcacatatggtatgtgagagaccttggtcaatt
ttgcctctaaccgtccgatggttaaagcaagaatactatacagagctatgtcctactcca
ccttctcacataccactggcatttggtccagtagatgtgaagatgccaacaaagtgtcaa
aagaaaaaaacagacattgtaaatacaaaggaccctgaaacagaccatacagaatacact
tcacttctcgaacgaatggaacaaaagctgaaagacttgaaagatgcagatacaatggct
gcgtctgctactcacattaaatgtagtttatgtaaagagtccatcacagaaggttctgct
ctaaagtgtgttgagcaatgttcatcctcatttcatatacattgccttgctgaagatttt
ttaaaggacaaacttcacgaaattattcctgttgagggattttgtccaatatgtaaggaa
ttgcttctatggggagatttaataagaaaatcaaagggattttatcaatatttgggagag
gatctttga

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