Styela clava (leathery sea squirt): 120346370
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Entry
120346370 CDS
T07291
Name
(RefSeq) nucleolysin TIAR-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120346370
03041 Spliceosome [BR:
sclv03041
]
120346370
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120346370
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120346370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
120346370
NCBI-ProteinID:
XP_039272019
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MQNPMTSAAPTGLNLNQGMPGAAQDQSGMNPVQASMQNMLINNQQNPMGTFGQMQNSMNG
GGVNDDEAYPRTLYVGNLDSQVTDSLIMELFGVIGPCTKCNMIRDPSGMNDMYCFIEFAN
HSCAAAAITAMNGRKILGKEVKVNWATRPANKKDTSSHFHIFVGDLSPEITSEDLRRAFN
HCGPISDAKVVRDMHTNASKGYGFVSFLKHADAHNAIETMRGQILGCRHIRTNWATRKPG
VPDQKLDFNVVVNQSSQTNCTVYVGGVQTGLTDMVMRNQFQGYGQIQEVRVFPDKGYAFV
RLSSHNEAARAIVDLHGSTIEGNIVKCSWGKEGAGTGGSTFNRSNPSGGNSWNSADMWSQ
QQQQQTQPQQSFGQWNGAQWGGYNQGQQQQNTWGGTWDNSQTQAAAAGMNQWAAWGNMQQ
PQQQTPQQQGGDGWGNMQQTNTAAMWGNWNQQQQPQMMSSGWGAGDNQQQSQESGNFAPQ
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccctatgacctctgctgcccctactggacttaacctgaaccagggaatgcct
ggtgccgcacaggaccaaagtgggatgaacccagtccaagcatcgatgcagaacatgttg
attaacaaccaacagaatccgatgggaacgttcggtcagatgcagaactcaatgaatgga
gggggagtaaatgatgacgaagcatatccaagaacgctatatgttggaaacctggattca
caagtcactgacagtttgatcatggagttgtttggcgtcatcggtccttgcacaaagtgt
aatatgatcagagatccgagtggaatgaacgacatgtattgcttcattgagtttgcaaac
cattcctgtgctgctgcggcaattactgcgatgaacggcagaaagattttggggaaggaa
gtgaaagtcaactgggcaaccagacctgcaaacaaaaaagacacaagtagccatttccac
atctttgttggtgatctctctcctgaaattacttctgaagatttgagaagagcttttaac
cattgtggacctatctcagacgcaaaagttgttcgtgacatgcacaccaatgcttctaag
ggatatggatttgtttctttcctaaagcatgccgatgcccacaatgccatcgaaacaatg
cgaggacaaatacttggatgccgacacattagaaccaactgggcaacaagaaaacctgga
gttccagatcaaaaattggatttcaacgtcgttgtgaaccagtcaagtcagaccaactgc
acggtttacgtcggtggggtgcagactggtcttacggacatggtcatgcgtaaccagttc
cagggttacggacaaatccaggaagtgagagtatttcctgataaaggttatgcttttgta
cgcttgagtagtcacaacgaagccgctcgtgcgatcgttgatcttcacggatcgactatt
gaaggaaatatcgtgaaatgctcgtggggaaaggaaggcgccggaactggaggctcaaca
ttcaatcgatcgaatccttctggtggcaactcatggaattccgcagatatgtggagtcaa
caacagcaacaacaaacgcaaccacaacaatccttcgggcaatggaatggagcacagtgg
ggtggatacaaccaaggtcagcagcagcaaaacacatgggggggaacatgggacaacagc
cagacccaagcggccgcagcaggaatgaatcagtgggcagcatggggtaatatgcagcag
ccccaacaacaaaccccgcaacaacagggaggcgatggatggggtaacatgcagcaaact
aatacggctgcaatgtggggaaattggaaccaacaacaacagccccagatgatgtcaagt
ggttggggggcaggagataaccaacagcaatcgcaagaatcggggaatttcgcccctcaa
cagtaa
DBGET
integrated database retrieval system
