Styela clava (leathery sea squirt): 120346436
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Entry
120346436 CDS
T07291
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04145
Phagosome
sclv04512
ECM-receptor interaction
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120346436
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120346436
09142 Cell motility
04820 Cytoskeleton in muscle cells
120346436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120346436
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120346436
00536 Glycosaminoglycan binding proteins [BR:
sclv00536
]
120346436
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Phagocytosis
Opsonins
120346436
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120346436
Exosomal proteins of colorectal cancer cells
120346436
Exosomal proteins of bladder cancer cells
120346436
Glycosaminoglycan binding proteins [BR:
sclv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120346436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
120346436
NCBI-ProteinID:
XP_039272110
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MVKAFTILALLCLAVISFPTILGRKHARGKSPTPVDGFAKLAEEIGKLTLATQKMTQAIL
ECKACGIDRKDDCDLSNPCFTGVECTNVEGGVKCGPCPEGYMGDGKTCTFIKECPVGQAG
NGIHCGKDSDNDGQPDEKLPCEEQSCQKDNCVNIPNSGQEDRDGDGIGDSCDDDIDDDGR
KNTDDNCKYIANKGQEDGDGDGVGDACDNCISVQNFQQFDVDKDGLGDECDDDKDGDDHD
NSDDNCPNIPNESQLDRDGDNVGDVCDNCPDEENPDQKDSDSDLVGDLCDHDQDRDKDGV
QDDKDNCPDIINSGQLDTDKDGLGDACDDDDDDDGITDENDNCRLVANPDQKDKNKNSVG
DACEDDFDGDEVPDENDACPKNANIQKTDFRDLQQINLDPSGSEPPNWVVTHNGKEITET
KNSDPALAVGDTAFNGVDFYGTLFVNTNTDDDFIGFVFGFQDSSRFYVAQWKQADQGVSK
AGFQIKVIESQTGPAKQLANALWKGSSAEGQAKLIWIDPANKGWKDKTSYRWELIHRPSV
GYIKLRIYQGTSLLTDSGVVKDETFKGGRLGVYCYSQENIIWSDVEYRCNETLPFDYQSS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagcattcactattttggcactattgtgcttggcggtaatttcgtttccaaca
attttaggccgtaaacatgcgaggggtaaaagcccgacgccagtagatggttttgcaaaa
cttgccgaagagattgggaagttgacactcgcaacacagaaaatgacgcaagcaattctt
gagtgcaaagcatgtggaatagatcgaaaagatgattgtgatctcagcaacccttgcttt
actggtgttgaatgcactaatgtagaaggaggcgtgaagtgtggaccttgtcctgaaggc
tatatgggtgatggaaaaacatgcacatttataaaagaatgcccggtaggccaagccgga
aacgggattcactgcgggaaagatagtgataatgatgggcagccagacgaaaaactgcca
tgcgaagaacagtcctgtcagaaggataattgtgtaaatataccaaatagtggacaggag
gacagggatggagatggaattggcgattcttgcgatgacgatattgacgatgacggcaga
aaaaatacagatgacaattgcaaatacattgcgaataaagggcaagaagatggggatgga
gacggtgtgggcgatgcatgtgataattgcatatctgtccaaaatttccaacaattcgat
gttgataaagacggattaggcgatgagtgtgatgatgataaagatggggatgatcatgac
aattctgatgacaactgtccaaatattccaaacgagagtcagcttgatagagacggggat
aacgtaggagatgtgtgcgataattgtccagatgaagaaaatccagaccaaaaagattcg
gattctgatcttgtaggcgatttgtgtgaccatgaccaggaccgggataaggacggtgtt
caagacgataaagacaattgtccggatatcatcaacagtggacaacttgatactgacaag
gatggactaggcgatgcctgtgatgacgatgatgatgatgacggcataactgatgagaac
gataactgtagattggttgcaaaccccgatcagaaagataaaaataaaaacagtgtagga
gacgcatgtgaggatgattttgacggtgatgaagtaccagacgagaatgatgcttgccca
aagaatgctaatattcagaaaacggatttccgagatttacaacaaattaatcttgatcca
agtggctctgaaccaccaaattgggtggtaacacacaatggtaaagagattacagaaacc
aagaacagtgatcctgcgctggcagtcggtgatactgcattcaacggagttgatttctat
ggaacattatttgtgaataccaatactgatgacgatttcataggttttgttttcgggttc
caggatagcagtagattttacgtcgcacaatggaagcaggctgatcaaggtgtttctaaa
gctggatttcaaataaaggttattgaatctcaaactggtccagcaaaacagttagctaat
gctctgtggaaaggttcaagtgcagaaggccaagctaaactcatctggattgatccagca
aataagggatggaaggataaaacgtcataccggtgggaattgatccacagaccttcagtt
ggatatatcaagttgagaatataccaaggaacctcattattgactgatagcggagtagtt
aaagatgaaacgttcaagggaggaagactaggtgtttactgttattcacaagagaacatc
atttggtcagatgtcgagtacagatgcaatgaaacactgccattcgattaccaaagcagt
tag
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