Styela clava (leathery sea squirt): 120346441
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Entry
120346441 CDS
T07291
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120346441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120346441
Ion channels [BR:
sclv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120346441
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120346441
NCBI-ProteinID:
XP_039272116
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MKLNFRHILLFAAFVLLFQYGNAFKEFQSDEAKLARKLLADYNPEIRPYGMRENATKVRL
GMTLSQIISVNEKDEELSTSVYMTHEWNDFRLTWNKSDFGGIHIHRLPADDIWTPRIILG
NSKDGEFDVSLRVDTLIHSDGSVEWLPPALYKSSCSIEVALFPFDWQNCTMDFRLTTYDK
SEIELEFAYGDEIWVDPAAFQPNGEWDLIQKPIKIHSSYRDGAEFQTMRFYFIMQRRPQF
YVMNLIVPCILMTLISCFVFFLPSVSCEKMTLSISVLLGETVFLFLIAQRMPETSLSVPL
IAGYLLFTMTLVICCVIFSVIVCNIHYRSSRTHLMPKWVKTFFMDFLAPILYVERPPQAQ
DAVKKPTRNSRTEKHVKDILDRNVLQAPSEVLFDKQARRYGFKARHVQNATGFIDVNSTP
DGKVDVSSIPAAMTPLPYHLQCLVTNIKYVSSSIQKDQFEEQACDDWAYVALVVDRLLFW
IYLGVFTFGTLGFFLKTTTAYYPT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaattttaggcatattttgctattcgcagcatttgtgttgcttttccaatat
ggcaacgccttcaaggagttccaaagcgacgaagcaaagttggcaagaaagcttcttgct
gattataatcccgaaattcgtccgtacggaatgagagaaaatgccactaaagttcgactg
ggtatgacgttatctcaaattattagcgtgaatgaaaaagatgaagaactttctacttcc
gtatacatgacacacgaatggaatgattttcgtttgacttggaataaatctgattttggt
ggaatacacattcatagactgccagctgatgacatatggacacctagaattatcttaggc
aatagcaaagatggagaatttgacgtttcactgagagttgataccctgattcacagtgat
ggatctgtggaatggctaccgcccgcattgtataagagttcatgcagtatagaggttgct
ttattcccgtttgactggcaaaactgtacaatggattttcgactaacaacgtatgataaa
tctgagattgaattggaatttgcttatggcgatgagatatgggtcgatccagcagcattt
caaccaaatggcgagtgggatttaatacaaaagccaataaaaattcattcatcttatcga
gatggagctgaatttcaaacgatgagattttattttatcatgcaaagaagaccgcagttc
tatgtaatgaacttgatagtgccttgcattctaatgactctcatttcgtgcttcgtgttt
tttcttccatctgtttcatgtgaaaagatgacactttcaatttctgttctacttggcgaa
actgttttcctttttctgattgctcaacgaatgccagaaacatctttatcagttcctctt
attgctggttaccttctatttacaatgactttggttatttgttgcgtaatattcagtgta
attgtctgtaacatccattaccgctcatcaagaactcatttaatgccaaagtgggtgaag
acattttttatggattttcttgctcccattctttatgttgaaagaccgccacaagcacaa
gatgccgtaaaaaaaccaaccagaaactcaagaacagaaaaacatgtgaaagacatcctt
gatcgtaatgtactacaagcacccagtgaagttttatttgacaagcaggcaagacgttac
ggattcaaagcaaggcacgtgcaaaatgccactggattcattgacgtcaattcaacgcca
gatggcaaggttgacgtgtcatcgatacctgcagccatgacaccattaccatatcactta
caatgtcttgttactaatattaaatacgtctcgtcatcaatacaaaaggatcaattcgaa
gaacaggcatgtgatgattgggcatatgttgctctggttgtcgatcgacttctgttttgg
atatatcttggtgtatttacgttcggaactctaggattcttcctgaaaacaaccacagcc
tattaccctacgtaa
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