Styela clava (leathery sea squirt): 120346447
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Entry
120346447 CDS
T07291
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120346447
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120346447
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120346447
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120346447
03036 Chromosome and associated proteins [BR:
sclv03036
]
120346447
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120346447
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120346447
SWI/SNF complex
120346447
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120346447
PBAF complex
120346447
SWI/SNF complex
120346447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
120346447
NCBI-ProteinID:
XP_039272122
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSRQLEPLRTYGPKPAKFQLEENGEYYMIGSEVGNYLRLFRGSLYKRYPSLWRRVATADE
RKIIATRSPDLWKRIAKKLYKQAKGRKKDLGHSTLATNVSLLRAVEVEDVFAGNDQKYRA
STLSLPVDTSYSRDSGKNKRNSSWVPTLPNSSHHLDAVPCATPISHVPKSQKKIRTFPFC
YDDRDPTLINSNAQQPEVLIPIRLDMEVDGQKLRDTFCWNKNEQLISPEMFAEVLCDDLD
INPLTLVPLISQAIRTQIEAYPNASDSLLSEQSDQRVILKLNIHVGNISLVDQFEWDMSD
PDNSPEKFAMKLSQELGLGGEFVTAIAYSVRGQLSWHQRTYAFSENPLPGVDIPVRNTGE
ADQWCPFLETLTDAEMEKKIRDQDRNTRRMRRLANAW
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacaattagaacctcttcggacatatgggccaaagcccgcaaagtttcagctg
gaagagaatggagaatattatatgattggttcggaggttggaaactatcttagacttttc
cgaggatctctttataagcgatacccatcattgtggcgaagagtagctactgctgatgag
agaaaaattattgctactaggtcaccagacttatggaaaagaatagcaaagaaattatat
aagcaggcaaagggcagaaagaaagatcttggacacagcactcttgcgacaaatgtatct
ttactccgcgctgttgaagtggaagatgtttttgcagggaatgatcaaaaatacagagct
tcaacattgtcactgcctgttgacacttcatattcaagggattcaggaaagaataaaagg
aacagttcttgggttccaactcttcctaatagttcgcatcatcttgatgctgttccttgt
gcaacaccaatcagccatgttccaaaatcacaaaagaagattagaacatttcctttctgt
tatgatgatagagatccaactctcataaacagcaatgctcaacaacctgaagtattaatt
ccaatcagacttgatatggaggtagacggacaaaaattgagagacactttctgttggaac
aaaaatgaacaactcatctctccagaaatgtttgcagaggtgttatgcgatgatctcgat
ataaatcctttgacacttgttcctctcatatctcaagcaattcgaacacaaatagaagct
tatccaaatgccagtgatagcttattatcagagcagtctgaccagcgagttatattgaag
ttgaatatccatgttggcaacataagccttgtcgaccagtttgaatgggatatgtcagat
ccagacaacagtccagaaaaatttgcaatgaagttatcacaagaacttgggctaggtgga
gaatttgttacagctattgcgtatagtgttagaggccaactaagctggcatcaacgaaca
tatgccttcagtgagaatcctcttcctggtgttgatattcctgtgaggaatacaggggaa
gccgatcaatggtgtccattccttgaaactttgaccgatgctgagatggaaaagaagatt
agggatcaggatcgaaacacaaggcgaatgaggcgattagcaaatgcttggtaa
DBGET
integrated database retrieval system
