KEGG   Styela clava (leathery sea squirt): 120346480
Entry
120346480         CDS       T07291                                 
Name
(RefSeq) exosome complex component RRP41-like
  KO
K11600  exosome complex component RRP41
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120346480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sclv03019]
    120346480
Messenger RNA biogenesis [BR:sclv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120346480
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     120346480
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120346480
NCBI-ProteinID: XP_039272165
LinkDB
Position
Unknown
AA seq 248 aa
MAGLELVTDEGYRIDGRLPTELRRIRCRLGVFSQADGSSYLEQGNTKILAAVYGPHEPSS
NMRGQILSDKAFLNCEYSQATFSTAERKHRSRGDRKGQELSMHIKQTFEAAILTELYPRS
QIDIYLQVLHSDGSNYCVCVNAATLALIDAGIALKDFVCACSVSVHKSIALKDINRVEEN
SNCPELMAAMLPKLDQIIYVEQNGRLHADEMSKALETVSSGCQDIFILLDTAVQDHVRDL
TTNIGGDV
NT seq 747 nt   +upstreamnt  +downstreamnt
atggctggtcttgaattggtaactgatgaagggtatagaattgatggcagattaccaaca
gaactacgccggattcgttgtcgtcttggagtgttttcacaagccgacggttcgtcctat
ttagagcaagggaacactaagatattagctgcagtctatggaccacatgaaccatcatct
aatatgagaggacagattctcagtgacaaagcatttctgaactgtgaatacagtcaagca
acattcagtactgctgagagaaaacatcgttctcgtggggacagaaaaggccaggagctg
tctatgcacattaagcagacttttgaagctgctattttaactgaattatatcccagatcc
cagatagatatttacctgcaagtcctacattctgatggaagtaattattgtgtctgtgtg
aatgctgctacgttggctttgatagatgcgggaatcgcattgaaggattttgtttgtgca
tgttctgtgagtgtccataaaagtattgcattgaaagatataaatcgagttgaagaaaat
tcgaattgtccggaactgatggctgctatgttacctaagcttgatcagataatctatgtt
gaacaaaatggaaggctgcatgcagatgagatgagcaaagcattggaaactgtttcatca
ggatgtcaagatattttcatcctattagatactgcagtgcaggaccatgtcagagattta
actactaatattgggggcgatgtctga

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