Styela clava (leathery sea squirt): 120346484
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Entry
120346484 CDS
T07291
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00310
Lysine degradation
sclv00514
Other types of O-glycan biosynthesis
sclv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120346484
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120346484
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120346484
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120346484
Glycosyltransferases [BR:
sclv01003
]
O-Glycan biosynthesis
O-linked Gal type
120346484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120346484
NCBI-ProteinID:
XP_039272172
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MLTNTFGITFILCIGFTKIQRTTCMLEETTTYEEKARDRMFSAKNIKSKIGEKTILVAIF
VRNKEHSLPYFLRGLEDLKYDKELMWLWIVSDHNRDNSTKQLEAWVEVFKDKYAKIEFEK
PDLPVEYNGQRSDLDWTNDRYIRLLKLRQFALNKARRIDVDFILYIDADNILMNPYTLNY
LTEKSETIIAPMLNSNTDYSNFWGKVNEQGHHVKNNLYKQIITRKQTGTFDVPFVHSTFM
INLKNKDSGKVRFLPIPPCYDYKFNDNMVFRYQCDFKGVHMYIDNSAFYGYLPEPQDNDE
DLEDEIYNFLRMRMDVMTLPPIGVGITIRKSIHVPDKAIITSLPVDHVFVINLERNRDRR
LRINKSFAMHGINYTLFEAVDGKLLNKSYMDSLGIKVLPGYKSPDGGADMTVGEIGCFLS
HYFIWKKILKNKYESTIIFEDDVQFRPKFIQKFKNVMKKVENEKIPWDLIYLERIPIKKG
EEEPVMLENESGPNLVQPVYSFWAIAYMISYAGAKKLIDAEPLSKIIAVDVFLPVMYGKQ
PLSYINEYFLKKNLNALSFKPTIVKQTHYYNNVNHVSDTANSKFVCDILD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaatacatttggtatcacattcattctttgtattggctttacgaagattcaa
cggacgacatgtatgttagaagagacgacaacatacgaagagaaagcaagagatagaatg
tttagtgctaaaaacataaaatcaaagataggtgaaaaaacaatacttgttgctatattt
gtacgaaataaggaacattcgttgccatattttttacgaggccttgaagatttgaaatat
gataaagaactgatgtggctgtggattgtttctgaccataatcgagataactctacaaag
caactggaagcctgggtagaagttttcaaagacaaatatgcaaagattgaatttgagaaa
ccagatttaccagttgaatacaacggacaaaggagcgatttagattggacaaatgataga
tatattcgactgcttaaactgaggcaatttgctttgaacaaagccagaaggattgatgtc
gatttcattttatatattgatgctgataatattttaatgaatccatacactttgaattac
ctcactgaaaaatctgagaccatcattgcacctatgttgaattcaaataccgattattcc
aacttttggggtaaggtgaacgaacagggacatcatgtaaagaataatctgtacaagcaa
ataataacacgtaaacaaaccgggacttttgatgttccatttgtacattcaacattcatg
ataaatttaaaaaataaagattctggaaaagttagatttctaccaattccaccctgttac
gactacaaatttaatgataatatggtttttcgttaccagtgtgatttcaaaggcgttcat
atgtatattgataattccgccttttatgggtatttaccagaaccacaagataatgacgaa
gatctggaagatgaaatttataattttttgagaatgagaatggatgtcatgacattgcca
ccaataggcgttggaataacaatacgaaagtctatacacgtcccggataaggcgattatt
acgagtcttccggttgatcatgtgtttgtaataaatttggagcgaaatcgcgatcgcaga
ttacggataaataaaagcttcgcaatgcatggaattaattacacgttatttgaggctgtt
gatggaaaattattaaacaaaagttatatggatagtctcggaatcaaagtacttccagga
tataaaagcccagatggtggtgctgatatgaccgtgggtgaaattggctgttttttgagt
cattatttcatttggaaaaagattttgaagaataaatacgaatctactattatttttgaa
gacgatgttcaattcagaccaaaatttatacagaaatttaaaaatgttatgaaaaaagtt
gaaaatgagaaaattccttgggatttgatttatttggaaagaattccaataaaaaaagga
gaggaagaaccggtgatgttagaaaatgaaagtggtcctaacttggttcaaccagtatat
tctttctgggccatagcatacatgatatcttacgctggggcgaaaaaattaatcgatgcc
gagccgttaagtaaaattattgccgtggatgtgtttcttcctgttatgtatggaaaacag
cctttatcttatattaatgagtattttctaaaaaagaacctcaacgcgctttcatttaaa
ccgaccatcgtaaaacaaacacactactacaacaatgttaaccatgttagcgataccgca
aattccaaattcgtctgtgatatcctggattag
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