Styela clava (leathery sea squirt): 120346552
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Entry
120346552 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: dynein intermediate chain 2, ciliary-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120346552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120346552
04812 Cytoskeleton proteins [BR:
sclv04812
]
120346552
Cilium and associated proteins [BR:
sclv03037
]
Motile cilia and associated proteins
Dynein arm
120346552
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120346552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
DUF2681
Motif
Other DBs
NCBI-GeneID:
120346552
NCBI-ProteinID:
XP_039272252
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPKPPKSVRGPGSTLGTKASKGGKGTRTQRLREDDDLTELGDLGDEYVQGRTLVKPDDQL
ELSEAELKEEFTRILTANNPHAPQNIVRFNFKERTFKQTSSVEQIAIHFALDGNMLHKDS
DEARRQRAKAGVGESTSEAALSEVGEEAEVAAEGEEGEKEEAAEQQPPAKKESLRNQFNF
SERASQTFNNPYRERATATEPPPRANFSATANQWEIYDAYLEDIQKQEKSKEKAKQLPTY
KKDDEKTKKKLTVIETSSDDISRVSRASKIIERMVNQNTFDDIAQDYSYFEDASDEYRDQ
EGTLLPLWKFSFDKAKRLAVTSLCWDPKYNDLFAVGHGSYDFTKQGRGMLLFYSLKNPSY
PEYVYSTESGVMCLDIHPDYPYLVSVGFYDGSVGVYNVQEKARGAIYKSTAKTGKHTDPV
WQVKWQKDDLDNNLNFFSVSSDGRVVSWTLVKNELIFTDVITLTVSDIPAEGPDGTQLQL
LGCGTSFDFHKKVDYLFLVGTEEGKIHKCSKAYSSQFLDTINAHHMAVDAVRWNPFHPDI
FISCSADWTVKIWDHNYSDQPMFTFDLNSAVGDVAWAPYSSTIFGAVTC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacctccaaagtctgtcaggggacctggatcaacacttggaacaaaagccagt
aaaggaggaaaaggaacaagaactcaaagactaagggaagatgatgatctgactgaattg
ggcgatttaggtgatgaatatgttcaaggtcgaacactcgttaaaccagatgaccaattg
gaattgtcagaagcagaattaaaagaagaattcacaagaattttgactgcaaataatcct
catgctccccaaaatattgttcgatttaatttcaaggaacgaacgtttaaacaaacatcc
agtgtagagcagattgcaattcattttgcattagatgggaacatgcttcataaagacagt
gacgaagcaagaagacaaagggcaaaggcaggggttggagaaagtacaagcgaggctgca
ttgagtgaggtaggagaagaagcagaagttgctgctgaaggagaagaaggagagaaagaa
gaagcagcagaacaacaacctcctgctaagaaagaaagtttaagaaatcaattcaacttc
agtgaaagagcttcacagacatttaataatccttatagagaacgagcaactgctactgaa
ccaccaccaagagcaaacttctcagcaacagcaaatcaatgggaaatttatgatgcttat
ctggaagatatacagaaacaggaaaagagcaaagaaaaagccaaacaacttcctacatac
aagaaagatgatgagaaaacgaagaagaaactgactgtcattgaaacatccagtgatgat
atttcaagagtatcgagagcatcaaagataatcgagagaatggtgaatcagaatacattt
gatgacattgcacaagattacagttattttgaagatgcatcagatgaatacagagatcaa
gaggggacattgcttcctctttggaagttttcatttgacaaagcaaaacgactggcagta
acttcattatgttgggacccaaaatacaacgacttgtttgctgttggacacggatcatat
gatttcaccaaacaaggaagaggaatgttgctattttattcattgaaaaacccatcatat
ccagaatatgtttactctacagaaagtggtgtaatgtgtcttgacattcatcctgattat
ccgtacttagtttcagtaggattctatgatggcagcgttggtgtgtacaatgtgcaagag
aaagcacgtggtgctatatacaaaagtaccgcaaaaacaggaaagcacacagacccggtt
tggcaggtcaaatggcagaaagatgacttggacaacaatctcaacttcttttcagtatca
tctgatggaagagttgtatcatggactctagttaaaaatgaattgatattcactgatgtc
ataacattgactgtcagcgatattcctgctgagggaccagatggaacacaacttcagtta
ttaggatgtggtacttcattcgacttccacaagaaagttgactacctgtttttggttggc
actgaagaaggaaagattcataaatgttcgaaagcatattcgagtcaattccttgataca
attaatgctcatcatatggcagttgatgctgtgaggtggaatccctttcatccagatatt
tttatctcatgctcagcagactggactgtgaaaatctgggatcataattacagtgatcaa
ccaatgttcaccttcgatttgaatagtgctgtgggtgatgttgcttgggctccttattct
tcaaccatatttggtgccgtcacatgctga
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