Styela clava (leathery sea squirt): 120346784
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Entry
120346784 CDS
T07291
Name
(RefSeq) glutamate [NMDA] receptor subunit 1-like isoform X1
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120346784
Ion channels [BR:
sclv04040
]
Ligand-gated channels
Glutamate (ionotropic)
120346784
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
ANF_receptor
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120346784
NCBI-ProteinID:
XP_039272539
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MLGMNIHWLVRPGMTCLKLFCCLFPFILTLVSAVSDKSDNVTIIVLHDFRDINFRKLLDA
TESLVNVKFSTKLNLHCEDIFLDNHNDVTGRHLFNVGEWLRKNRKVEAVVGPTDSDGVLL
FHPHAVLLRAPHFAPVATDPIFESTDRFPFLIRMQHDYRHQIFALLGVVKKLNWRTTAII
SSDGDHERRAAERFSETAEKSGMNVLRQICGEQTSRTQIIDCLGVVKRSGQRVISLICGQ
KFASQMLDVAGELKMTGSGWAWILWSDIIDDIPMQDDIPQHEETSVRWKTNTPTYLLDIP
GLLAIKTSYSRGLLLDDFISEYLKHNSTKGIEFPTIKRLKYVDSILAAVNGIISMENTPD
DDRFSLLHHVTSANINSSGVTDNIILDPQNRISRHSVRFDVMNCKDNGKWLKIGEWTDNN
GALESLSRNFTLNMDLDELLLPGGEREISSYLAQLQFQVFEVVTIDSPPFVYINKTKVSR
TFEAGDSYVQYSGFCIDLFDALSKELGFQYNIRNLGKTGEFGSRNPVSGHWNGLIGELVS
SKADIAVAPLTITENRATVVDLTSAFMETKLKFAINRDAIMHGADSFVYGRFSFLHPFST
ELWVALMISVILMGIYLTVISRLSPYGAHGHYFQSERGAESSVRMARRRSSAFLPSSTNF
GRSSLGISVDKRKNYGAQNLNHGRKSAEIHGQVESDSDEEEEEQVRQDARRFMSINNALY
FACAGLLWQSPECVPRALSARMAAGIWYMVGVIIVASYTANMVAFVSQTSTTSRLSTVED
LLNQRMILPATVASSSVDSLLMTSNLDVAERLHKDILRNPKISLQPNVASALNLTNRGDV
AFIWEGVSLDYFASKDDCHLTTIPLGFGKASYAFALKRGSAFTEAFNRQILKFRQTGFLE
ELYDKHFKETCMGSSTERDTSEAYDRLTYSSLSGVFLMISVGAAISVLMIAIEWIVSSFS
EIDRTDLKKPSDLSSALKIKLQRLKVDFNSNWLPFRNIREHWSKFRPTKETDIPTKIGFP
SEQWKRFSSSVGSEKLHPGESISDPEL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaatgaatatacactggttggtaaggcctgggatgacttgtttaaaactattt
tgctgcctctttccgtttattttaacacttgtatctgcggtgtcagacaaatcggataac
gttacaataatcgttcttcacgattttcgtgacatcaactttcgaaagctattagacgcg
actgagagtttagtcaatgtgaagttttccaccaaactcaacctgcactgtgaagacatt
ttcttagacaaccataatgacgtaaccggtcggcatttgttcaacgtgggggaatggcta
cgtaagaatagaaaagtggaggcggttgtaggaccgacagattcagatggagttctatta
tttcacccacatgccgttctgcttcgagccccacatttcgccccagtggcaaccgatcca
atatttgaatcaactgacagatttccattcttaatcaggatgcagcatgattatcgacat
cagatatttgccttgctcggtgttgtgaaaaaacttaattggcgaaccactgctatcata
tcgagtgatggagatcatgagagacgtgcagcggaacggttcagcgaaacagcagagaaa
tccggaatgaatgtactccgtcagatatgtggcgagcaaaccagtagaactcaaataata
gattgcctcggtgttgtcaaacgatcaggtcaaagagttatatctttgatttgtggccag
aagtttgctagtcaaatgcttgatgtcgccggggaactgaaaatgacaggatcaggatgg
gcatggatattgtggagcgatataatagatgatataccaatgcaagatgatatacctcaa
cacgaagaaacaagcgtgagatggaagactaatactcccacatacctccttgacataccg
ggattactcgccataaaaacatcttattcgcgtggacttcttttggatgattttatatct
gagtatttgaaacacaattcaacgaaaggcattgaatttccaacaataaaacggctaaaa
tacgtagattcaatattggctgcggttaatggtatcatttcaatggaaaatacccctgac
gatgatcgtttttcattgttgcatcacgtcacgtctgcaaatataaattcatccggagta
actgataatattattttggatccacaaaatcgaatttcacgacattccgttaggtttgac
gttatgaattgtaaagataatggaaagtggttgaaaataggagaatggacagacaataat
ggtgcattggaatcgttaagtcggaattttacactgaatatggatctggatgaattgctt
ttacctggaggcgaaagggagatcagttcatatttagcccagctgcagtttcaagtgttt
gaagttgtcacaattgattctccgccttttgtctatataaacaagactaaggttagtcga
acatttgaagctggagacagttatgttcaatactctggattttgcatcgatctttttgat
gctctgagcaaggaacttggattccagtacaatatcagaaatcttggaaaaacgggagag
tttggatcgagaaatccggtgagtggacattggaacggattaatcggtgaactggtatcc
agcaaagctgacatagctgtcgcacctctgactatcactgaaaatagagcaacagtggtt
gatctaacaagcgcgttcatggagacgaagctaaagtttgccattaatcgtgatgcaatt
atgcatggagcagattcattcgtctacggacgcttctcgtttttgcatcctttcagcacg
gaactatgggtagctctgatgataagcgtgatattgatgggtatttacctcaccgtgatt
tctcgactgagcccctacggggcacacggacactacttccagagcgaacgaggagcggaa
tcgagcgttcgaatggccagacgaagaagtagcgcctttcttccgtcgagtacaaatttc
ggtcgaagttctttgggtatttctgtagacaagcggaaaaattacggagctcaaaattta
aatcatggtagaaaaagtgctgaaatacatggacaagtggagtcagattcagatgaagaa
gaagaagaacaagtgaggcaagatgctcgccgatttatgtctatcaataacgcgttatac
tttgcctgtgctggccttctttggcagagtcccgaatgtgtgcctcgcgcgctttcggca
agaatggctgctggaatttggtacatggttggcgttattattgttgcttcatacacggca
aatatggtcgcttttgtttcacagaccagtaccacaagtcgtcttagtactgttgaagat
ctactaaatcaaagaatgattttacctgccacagtcgcttctagttccgtcgacagtttg
ttgatgacatcaaacctcgatgtagcagaaagactgcataaagatattttgcgcaaccca
aaaatttcgttgcaacctaacgtagcctcagcgttgaatttgaccaatcgtggagatgta
gctttcatatgggaaggagtgtctttggattatttcgcttctaaagatgattgtcacctg
actacaattccattaggatttggcaaagcatcttacgcctttgctctcaagagaggatcc
gcttttactgaggcttttaatcgccagattttaaaatttcgtcagactggatttctggaa
gaattgtatgacaagcattttaaggaaacatgcatgggatcatcgacggaaagagacacg
tcggaagcctatgatcgacttacgtattccagtctgtccggtgtttttcttatgatatcg
gttggtgcagcaatcagtgtgttgatgattgcgattgaatggattgtttcatctttttct
gaaatcgatcggacagatttgaaaaaaccttccgacttgtcatcggccttaaaaattaaa
cttcaaagattgaaagttgattttaacagtaattggctcccgtttagaaacatacgagaa
cattggtctaaattcagaccaaccaaagagactgacattccgaccaaaataggtttccct
tctgagcaatggaaaagattttcatccagtgttggttctgaaaaacttcatcccggtgaa
tctatatccgatccagaattataa
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