Styela clava (leathery sea squirt): 120346829
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Entry
120346829 CDS
T07291
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120346829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120346829
Spliceosome [BR:
sclv03041
]
Common components
Common spliceosomal components
SR proteins
120346829
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120346829
NCBI-ProteinID:
XP_039272600
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MMACRIYVGRLSHRARESDVERFFRGYGRIRDIMMKNGFCFVEFDDYRDADDAVHDLSGK
ELCGERVVIEIAKGTPRGAGGNFISGYYPPPAPQSRGRDYGGYGRDHGGGRRGGRDRDSG
GGNFGPPSHTEYRVIVENLSSRVSWQDLKDYMRQAGEVTFADAHRFHKNEGVVEFASRSD
MDSAIEKLDDTEINGRRIKIVRDMSRARKHSSRSRSRSRSRSRRNSRRSHSRSRSHSRSG
SRSKRSRSGSRGRKRSRSREDRNGHSRSRSRSASPAKKKKSTERSRSRSDERKSKSRERQ
ESERGDEDGKRNEDGEDKAEEDDRERSRSRSRSPSPRDERRRSRSHSDPPRSRSRSRSHS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtgtcgcatatatgttggtaggctaagccatagggcaagggaaagtgatgtg
gaacgattttttcggggatatggccgtatcagagatataatgatgaaaaatggattttgt
ttcgtggaatttgatgattacagagacgccgatgacgcagttcatgacctcagcggaaag
gaactgtgtggcgaaagagttgtaattgaaattgccaaaggtacacctagaggcgcgggt
ggaaactttatcagtggatactatccaccccctgccccacagagcaggggaagagattat
ggtggatatggtcgggatcacggtggcggacgcagaggtggtcgtgacagggatagtgga
ggtggaaattttggtccaccatctcacacagaatatagagtcatagttgagaatttatca
tcacgtgtaagctggcaagacttgaaggactacatgcgtcaagctggagaagttaccttc
gctgatgctcacaggtttcacaaaaatgaaggtgttgttgagtttgcgtcacgtagcgac
atggatagtgctattgaaaagcttgatgataccgaaattaatggacgtcgaatcaagatt
gttagggacatgagtcgagctcgaaaacatagttctagatctcgttctagaagccgaagt
agaagtcgcagaaacagcagaaggtcgcacagcagatcaaggagtcacagccgatctgga
tcgaggtccaagcgttccaggagcggaagtcggggaagaaaaaggtcccgcagtcgtgaa
gaccgaaatggccattcacgatctcgcagtcgatcggcctctccagcaaagaaaaagaaa
tcaactgagcgttctcgttccagatctgatgaaagaaaatctaaatccagagaaagacaa
gaatcagagaggggagatgaagatggcaaacgcaatgaagatggagaggacaaggctgaa
gaggatgacagagaaagaagccggagcaggagtcgttcaccttcgcctagagacgaacgt
cgtcgttcacgaagccattctgatccgccacgctcaagatctcgctccagaagtcatagt
tga
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