Styela clava (leathery sea squirt): 120346911
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Entry
120346911 CDS
T07291
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120346911
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120346911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
Ldl_recept_b
SGL
LCCL
EGF
FXa_inhibition
fn2
Arylesterase
DUF1986
EGF_CA
NHL
Ig_2
Ig_3
Rxt3
cEGF
Motif
Other DBs
NCBI-GeneID:
120346911
NCBI-ProteinID:
XP_039272637
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MYKSTAMNFFLVVAVIIGISVAEDNAKSVKKCTIHGERCTFPFTFRGKSYDECTSDGVES
ERTWCPTYIYPNGSAHLNYCSPCWGDQRCYLRADSFPDTTWTLNCPPGCVYVQRQMYGTD
NEYSSDSFICAAAIHEGLLTNETGGEVKFVKEDWKAPFLTRVVKNKVSSKPSKKEDFSMM
SFIKPLVVGPSPKLVFSHDKSSISMLTSDSTKYQLLIDGQTYATGVAVDVRNKKIYWIDM
TQRSIWRGDFDGKKVTNKRKIIDHTKVVRPENVAVDWIHGNIFWTDSGSNSVGVAKVTGA
NVALIKKGDKHYNPRGLAVDPKNGLVYITDFGKNPKIERCSMSVKDECETLIDDDVAWPS
GIALDIQRNQMCWTDRKIPMLSCSNTDGKRRRNMKLSEGRLKDPFAITLYKNRVYWTDWI
NTGILSINFLNWNDLHFHVGELENPSGISIYDRDAQLLYPNQCDGSRCEYLCVPSQDGAK
CQCKDGKCGQVAVKPKPQAAVDIYVADMSTIIRLKLKLESRETDTKTVLSRLGWAATVAI
DAAKETIYWSDTTSKKIEAAKLSDNLATSQRRTFLDNSDRYLGKVEGIAIDPITRLIYWT
DSSTNSVYVSNLDPVNGPRHVSQVVKGDPSYKPKAIALDPERGYMYIVNSSPPAKIQKCE
MGKQSNCQNIIKDAVLQVNWITIDYEEKRLYFSDSILDKIESSDLDGNGRKVIISGRATI
PQPYAVGIYKDRVYWNDWGTRRLMSADKTTGKDMHILSRTLRRPMGMVLYDPKNPMPEKY
RNLCASNNCRHLCLPSPYKSRIQYSCVCPEKMKGVSNAPECSGSNAPGIVRPVVCGRGFE
NSKQDPTQCVDKDECKVNKGGCQDECKNQPGSFECKCAKGSELQEDRKSCKVLVVDPCKP
NPCKNGGDCKTPGSDFICACPVGFKGKTCEEIDVRIKPVEPYDPKKAIRLHCVSPMNLNR
KIIWRLNRVEIDFASGWVSIKEEGRLLVIYSPHFSYSGVYTCQVGYGNTEKTAEFVVKIP
AIPSAICGKAPGIDIPSRTIVEKVLGGKLTKALMAPFMAMLYKKSIGIKTKQGVFCGGSI
IDTKHIVTAAHCFKLIAEDEVTVYVGRRDTDLQYKEPYEQSSDIKKLIKHDEFDPVTLDV
DIAIIVLKDPIYFSQAVKPICIAKPTDTDKSKAARPPNYGLVFGWGIKSDGTNSKFLREV
KLPVVKQSKCRETYKISSTMFCAGGDADKDACEGDSGGPFTLWSGDSWYLGGIVSWGHTC
GIKGKPGVYTRIGTKLRRWIYEKSDL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagagtactgcaatgaatttcttcctcgtcgtcgccgttattatcggtatttct
gtggccgaagataatgctaaatcagtgaaaaaatgcaccattcatggagagagatgcacc
ttcccctttacattcagaggcaaaagttatgatgaatgtacaagtgatggggtagaaagc
gaaagaacttggtgccctacttatatttatccaaatggcagtgcccatctgaattactgc
tctccatgctggggtgatcaacgttgttatttaagagctgactcattcccagacactact
tggacactgaattgtccaccaggatgtgtttatgtgcaaagacaaatgtatggaacggac
aatgaatattcttccgattcctttatttgtgctgctgctattcacgaaggattgctaaca
aatgaaactggtggtgaagtaaaatttgtcaaagaagattggaaagctccatttcttaca
agagttgtcaagaataaagtcagttccaaaccatcaaagaaagaggatttttcgatgatg
tcatttataaaaccattagttgtaggaccttctccgaagttggttttctctcatgacaag
agcagcatttcaatgcttacttctgatagcactaaatatcagttacttattgatggtcaa
acatacgcaactggtgtggctgtcgatgtcaggaacaaaaaaatatattggattgatatg
acacaaagatcaatatggagaggagattttgatggcaaaaaagtaacaaataaaaggaag
attattgatcacacaaaggttgtgagacccgaaaatgttgctgtagattggattcatgga
aacatattttggactgattctggtagtaattcagttggagttgctaaagtcactggtgca
aatgtagcactgataaagaaaggagataaacattacaatcccagaggattggcagttgat
ccaaaaaatgggcttgtctacataactgactttggtaaaaatccaaagatagaaagatgt
tcgatgtcagttaaagatgaatgcgaaacactcattgatgatgacgttgcgtggccaagt
ggaattgctttggatattcagagaaatcaaatgtgttggacagatagaaaaattcctatg
ttatcctgttcaaacacagatggtaagagaagaagaaatatgaaattgtctgaggggaga
ttgaaagatccatttgcaatcactctgtacaaaaatagagtgtactggacagattggatc
aacacaggcattcttagcatcaattttctgaattggaatgatttgcattttcatgttggt
gaactagagaatccgagtggcatttcgatatatgacagagatgctcagttattgtatcca
aatcaatgtgatggttctagatgtgaatacttatgtgttccaagccaagatggagcaaaa
tgccaatgcaaagatggaaaatgtggccaagttgcggtaaaacctaaacctcaagctgct
gtcgatatatatgttgctgatatgagtacaatcatacgattgaaattaaaattggaatca
agagaaactgatacaaagacagtgctgagtagactaggatgggcagcaacagttgcgatt
gacgcagcaaaggaaacaatatattggtcggatactacctcaaaaaaaattgaggctgca
aaattatcagataacttggccacctcacaacgacgaactttcctagacaacagtgataga
tatttaggaaaagtagaaggaatagcaattgatccaataacacgactcatctattggact
gattcatcaacaaactcagtttatgtttctaatctggatccagtgaatggaccccggcat
gtttctcaggttgtgaaaggcgatccaagttataaacctaaagctattgccttggatcca
gaaagaggttacatgtatattgtgaattcgtctccacctgcaaagatacaaaaatgtgaa
atgggcaaacaatcaaactgtcagaacattataaaggatgcagttttacaagtaaactgg
ataaccattgattatgaagaaaagagattatatttcagtgattcaatacttgataaaatc
gaatcatctgatttggatggaaatggcagaaaagttattatatctggaagagcaaccatt
cctcaaccttatgcagttggaatttacaaagatagagtgtattggaatgactggggcaca
agaagattaatgagcgcagacaaaacaacaggaaaagacatgcatattttatcgagaaca
ttgagaagaccgatgggaatggttctttatgacccaaagaatccaatgcctgagaaatat
agaaatctttgtgcatcgaataattgccgacatctctgtttaccctcaccatacaagagt
cgaatacagtattcatgtgtttgtcctgaaaagatgaaaggtgtttcaaatgctccagag
tgcagcggttcaaatgcaccgggaattgtcaggcctgttgtgtgtggtagaggatttgag
aattcaaagcaagatccaactcaatgtgttgataaagatgaatgtaaagtaaataaaggc
ggttgtcaagatgaatgtaaaaatcaaccaggatcattcgaatgtaaatgtgccaaaggt
tctgaattgcaggaagatcggaaatcttgcaaagttttagttgtggatccctgtaaacca
aatccatgcaaaaatggtggcgactgcaaaacgcctggttcagattttatatgtgcatgt
cctgttggattcaaagggaaaacgtgtgaagagatagatgtcagaataaaaccagtggaa
ccatacgatccgaagaaagcaatccgattgcattgtgtttcaccgatgaacttgaacaga
aaaattatctggcggcttaacagagttgaaatagattttgcctcaggatgggtgtcaata
aaagaagagggaagactgttggtgatatacagtccacacttttcatattctggtgtttat
acatgtcaagttggttatggtaatacagaaaaaactgctgaatttgttgttaaaatacca
gctattccaagtgcaatatgtggaaaagctccaggaattgatataccaagtcgaacaata
gttgaaaaagtattaggagggaaactcactaaagctttgatggctccattcatggcaatg
ctgtataagaaatcaattggaataaaaactaaacaaggagtgttttgtggaggaagtata
atcgatacaaagcatattgttacagcagctcattgttttaaattgatcgctgaggatgaa
gtaacagtatatgttggcagacgagacacagaccttcaatacaaagaaccttatgaacaa
tcctctgacataaagaaactcatcaaacatgatgaatttgatccagtcacattagacgtc
gatattgctattattgtattgaaagatcctatttatttctctcaggctgtcaagcccata
tgcattgcgaaacctaccgatactgacaagtcaaaagcagccaggccacccaactacggt
cttgtgtttggttggggaataaagagtgatggtacaaattcaaagtttctgcgtgaagtc
aaattgccagtagtaaaacaatccaagtgcagggaaacatacaaaataagttctacaatg
ttttgtgctggaggtgacgcagataaggacgcatgtgagggtgattcaggaggaccgttt
acactttggagtggcgactcttggtatcttggtggcattgtttcatggggacacacttgt
ggaataaagggaaagcccggtgtttacaccagaattggaaccaagttaagaagatggatt
tatgaaaagtctgacctttaa
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