Styela clava (leathery sea squirt): 120346915
Help
Entry
120346915 CDS
T07291
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120346915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120346915
Membrane trafficking [BR:
sclv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120346915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
120346915
NCBI-ProteinID:
XP_039272639
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MSNPYFNDVGNFGSGMNANPSNGPMKHPPPPQFPSSMTGGSSIPPAPHAQLPHGHTPPPT
SYQYNNTQHHPSTNAWPTNQGSMANMPPATSGYNMNGLVGLTPSSGARNSTPPSGPPHSQ
NMNLSNHVPSSQYSSQNMPPPPISQSTMNQRAGFNPNYSHGGYPSMGSNVPTSAHAPMSN
TAPYSPNKVHNTMPPPLMGQNINTPLPPTSDNFPKQPPNPTQFHHMQQRPPPSMMQNQLP
PPTSEQIPRQMHHPGQHHQPHQPQLLPPVPGAGMPPSVPGPGQYPFSSASGITHGMSNMG
IDDKHRPINIMMERRLLPLKKHQQKPLQFEAGPGDRGLIPPKQKNCNTDVFRCTLNAIPS
TQALLNKVKLPLGLIIHPFKDLSSLPVISAGTIVRCKRCRTYINPFVNFLDERRWRCNLC
FVVNEVPEEFLHHPVTKTYGEPHTRPECTNATLEFIAPQEYMVRPPQPAVYMFLFDVSHS
AVETGYLQVVCDALLDHLDHLPGDSRTKIGFLSYNGTVHFYRLAEGSSQPQMLVVSDLDD
IFLPTPDSLLVNLREGKELVSDLLRQLPELHEPPDNLSRGEVETQSALGSALQAAQKMMA
AFGGRITVFQQSMPTTGPGALKPRENPNSRAGDTATDCLNPSTDFYKKLALDSSAHQVAI
DFFFMNSQYIDIATLSCTSRFSAGDLHYYPGLHATHNPVQIERLSRDLDRYLTRKIGFEA
VMRIRCTKGIAIHTFHGNFFVRSTDLLALANINPDAGFGLNLSIEESLTDLSSVCVQAAL
LYTSSKGERRIRVHTMCFPVAKHMGEIFNNVDSDAVVSLLSKMAVDRSITSKISDARDAL
INAVIDASKAYKETISPGSVDNSLLVPPCMKTFPLMISCLMKHPAFRSGVSTRLDDRVFS
MIDLKMQPTCFALQSIHPDLYRVDDLSDEDGLDIDERIVPQPQILPLSAESINRDGVYLL
DAGWHMYLHVGPTANREFLQNVLGVKQFSDIEQPMYSLPDLDNPMSETFHNFLEWLQDQR
PHYAPMQVVRADSREHYYFMLHMRQDKTESSMSLQEFLQHVQQHLVKK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccatattttaatgatgtcggtaactttggatctggtatgaatgctaatcca
tcaaatggtccgatgaagcacccgcctccaccacaatttccttctagcatgaccggtgga
agttctattccccctgctcctcatgctcaattaccgcatggtcataccccaccaccaacc
agctatcaatacaacaatacacagcatcatccatcaacaaatgcttggcctaccaatcaa
ggttctatggccaatatgccccctgctacaagtggatataacatgaatggtttggttgga
ttgaccccaagttcgggggctcgtaattccactccaccatctggtcctccccattcacag
aatatgaatctctcaaatcatgtgccaagttcccaatatagttctcaaaacatgccacca
ccaccaattagccaatctactatgaatcagagagcaggttttaaccccaattactcacat
ggtggttatccttcaatgggttcaaatgttcctaccagtgctcatgctcctatgtccaat
accgcaccttattcaccaaacaaagttcacaacaccatgcctccaccactgatgggtcaa
aatataaatacaccattaccaccaacatcagacaattttccaaaacagccaccaaatcca
actcaatttcaccacatgcaacaacgaccaccaccttctatgatgcagaaccagctgccg
cctccaacgagtgaacaaattccaagacaaatgcaccatcctgggcaacatcatcaacca
catcaaccccaactgcttccccctgttccaggagcaggaatgccaccaagtgttccaggt
ccaggacaatatcctttctcttcggcatctggtattacgcatggtatgagtaatatggga
attgatgacaaacatcggcctatcaatattatgatggagagacgactgttacctttgaaa
aagcatcaacagaagccactacaatttgaagcaggtccaggtgacaggggtttaatacca
ccaaaacaaaagaactgcaacacggatgttttccgatgcacactcaatgcaattccaagc
acacaagcacttttgaacaaggttaagttacctctcggcctaatcattcatccattcaaa
gatctcagctcactacctgtaatatcagcaggaactattgtacgttgcaaaagatgtcga
acctacatcaatccgtttgtaaattttttggatgaaagaaggtggagatgcaatctatgt
tttgttgttaacgaagtacctgaagaatttctacatcatccagtcacgaaaacttatggt
gaaccccatactagaccggaatgcactaatgcaactttggaatttattgctcctcaagaa
tatatggttcggccaccacaacctgcggtatacatgtttctctttgatgtatctcactct
gctgttgaaactggatatttgcaagttgtctgtgatgctttgttggatcatcttgatcac
ttacctggagactcgagaactaaaataggttttctttcttacaatggaacagtgcatttc
tacaggttggcagagggatcatcgcaaccacaaatgcttgttgtttctgatcttgatgat
atatttttgccaacgccggattctcttcttgttaatttacgagaaggaaaagaacttgtt
agtgatttgttgcgtcaattacccgagctacatgaaccacctgataatttatctcgcgga
gaagttgaaactcaaagtgcacttggatccgctctacaagctgcacagaaaatgatggct
gcttttggcgggcgtatcaccgtatttcaacagtccatgcctacaacaggcccaggagct
ttgaaacctcgagaaaatccaaattctagagctggagatactgcaacagattgtctgaat
ccatcgactgatttttacaaaaaacttgctttggatagttcagctcatcaagtcgcaatt
gatttcttttttatgaattctcaatacattgacattgcaactttatcatgtacttctcgt
ttttctgccggcgatctgcattattatcctggtttacatgcgactcataatcctgtacaa
attgaacgtttatctcgagacttggatcgttatttaacaaggaaaattggttttgaagct
gtcatgagaataaggtgcaccaaaggaattgcaatccacacttttcatggaaatttcttt
gtacggtcaaccgatctacttgcacttgcaaatatcaatccagatgctggatttggttta
aatttaagcatagaagaaagcttaacagatttatcatcagtttgtgtgcaagctgcattg
ttgtatacttctagtaagggtgaaagaaggattcgtgtccacacaatgtgctttcctgtt
gccaaacatatgggtgaaatatttaacaatgtagattctgatgctgttgtttcactttta
tcaaaaatggctgttgatcgaagtataacatccaagatatcagatgcaagggatgcatta
ataaatgcagttattgatgcatcgaaagcttataaagaaactatcagtccaggttctgtt
gataattctctacttgttccaccttgtatgaagacctttcctcttatgataagctgcttg
atgaaacatccggctttccgttctggtgtttccacacgtctcgatgatcgagtattttct
atgattgatttgaaaatgcaacctacttgttttgcattgcaatccattcatcctgactta
tatagagttgatgatctttcagatgaggatggattggacattgatgaaagaattgttccg
caacctcagatactgccgttgtctgctgaatctattaatcgtgatggagtatatttactt
gatgccggttggcacatgtacttacatgtcggtccgactgcaaacagagaatttttgcaa
aatgtgctcggagtgaaacaattcagtgatatagaacaaccaatgtattcactgccggat
ttggacaatccaatgtcagagacttttcataacttcttggaatggttgcaagatcagcga
ccgcattatgcacctatgcaagttgtaagagcggacagtcgagaacattattacttcatg
ctacacatgagacaagacaaaactgaatcttctatgtcattgcaagaattcctacaacat
gttcagcaacacctcgtgaaaaaataa
DBGET
integrated database retrieval system
