Styela clava (leathery sea squirt): 120346919
Help
Entry
120346919 CDS
T07291
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120346919
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120346919
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120346919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_30
DEXQc_Suv3
AAA_19
Motif
Other DBs
NCBI-GeneID:
120346919
NCBI-ProteinID:
XP_039272645
LinkDB
All DBs
Position
Unknown
AA seq
2163 aa
AA seq
DB search
MATAWREDPRLTTALREFGNVSQDISEVFDQTKARRHSSPSDLTWQELVTILWTGCKQRH
SSKQLRSYVLELISQAGEMVGEDESIEMKETFAAEIFLTTMTLEQVESKHINKIRKTLPT
ATNNDIRDFHETVKKIKSFVGPSVFNKIKSQVDEIRTATTFGTKIKFSNDLPSLLQSTEM
DSDDEAQNDNNDKLTDSFRQLTISQVKATEKSSSSNKISSSFDVPWLEKNLRKYFHSDHF
LPNIMSLLQSSSSNDHLQNELFDLLGFDRFDLIQELLEHRQDLLKDQKRREILESGSRFK
SIDSRPTYGCQVTVQTDQEKQVSKAFRREEKRFAKKGMKNGNDDGGDSEIMNPDLLREQR
AMALLQAASAPLFSQRGKSIGNIERYPHVYDSQLSAKHSAALAGGKKMTLPEGFETKSTK
VYEEIRIPVKSSNLRFDQPLVKIKDLDEVSQLAFSGMKQLNRVQSCVYESAFKTNENLLI
CAPTGAGKTNVAMLTVIREIKRNIVEGVIQKDKFKIVYVAPMKALAAEMTRNFGGRLESL
GVKVRELTGDMQLTKSEIIDTQMLITTPEKWDVVTRKAVGDTALAQLVRLLIIDEVHLLH
DERGPVLETLVARTLRQVETQQSMIRIVGLSATLPNYLDVASFLRVNPHKGLFYFDGRFR
PVPLEQTFIGVKTMNRMQQAQDMNNICYEKAARNVERGHQVLVFVHARNATVKTAQALLE
IARNNGETGLFDCRQMSGFGQAEKQMSNSRNRELRELFASGFGIHHAGMLRPDRNLVERN
FSQGFIKVLCCTATLAWGVNLPAHAVVIKGTEIYDAKQGTFVDLGILDVMQIFGRAGRPQ
FDTSGEGTIITSYTKLSHYLALLTRQNPIESQFVAKITDNLNAEICLGTVNSVEDGVKWL
SYTYLYTRMRKNPLVYGISYDRLAQDPLLERWRSELIVNAGKNLAKAKMTRFTERTGYFN
STDMGRTASHYYINHNTIELFNEMINPTMSISNIFVMISKCSEFEQIKLRDDELEELDDL
IDTMCLIPPGGGSENTYGKVNILLQTYISRGSVRSFSLTSDLMYIAQNAGRIVRGLFDIA
VKQGEPVLTKKLLDLCKCVDRRMWPDESPLQQFPILKFETLRKIKEQRLTIDKMQDMNAN
DIGHMLRHPRIGTTVKMCVKEFPAIELETTIQPITRSVLRIRLTIIPRFKWHRKVHGTTG
EPWWIWVEDPETNMMYHSEYFILHMKHVENAEEQQLVFTIPIVEPVPSQYMVHAESDRWL
GASAICPISFQHLILPDRHPPHTELLDLEPLPTAALKEEYRCLYKFTHFNPIQTQIFHCL
YHNDCNALIGAPTGSGKTVAAELAILRMFNTQPKSKAVYIAPMKALVRERISDWKLRFGD
RLGKTIVELTGDVAPDMRAVARADIIVTTPEKWDGISRSWQTRNYVKSVSLIIIDEIHLL
GEDRGPVLEVIVSRTNFISSHTDRLVRIVGLSTALANARDLADWLGIKQLGLFNFRPSVR
PVPMEVHIQGFAGKHYCPRMASMNKPCFQAIRTHSPAKPVLIFVASRRQTRLTALDLIAY
LAAEDDPKQWLHMDEWQMEELTRNVQDNNLRLTLAFGIGLHHAGLVEKDRTLVEELFVNQ
KIQILVATATVAWGVNFPAHLVIVKGTEYFDGKTKRYVDFPITDVLQMMGRAGRPQFDDN
AVAVVLVHDVKKHFYKKFLYDPFPVESSLLDVLPDHLNAEIVAGTIMSKQDALDYLTWTY
FFRRLLMNPTYYNLERIETDMINEFLTGLVEKELSELLRSCCVVVDDVDDVTIEPTSIGR
IASYYYLSHLTVRMLCQEMKSGSTIPDILQLLTECQEYNELPVRHNEDIINKNLSEHLPL
QVSPDSFGSSSTKAHLLFQAHFSRIKMPSSDYATDLKSVLDQAFRILQGMIDISADEGML
ITTLRVMHMAQMVAQGIWFDNRSTLLTLPYVEEKSLFVFKQFSFRGNQVRHLPELMSLCK
ENPSYVKDVLMKHFTEAQAKKICDHLRNLPVVDVKLHVKGSWEKNEKIKQKIVPDVHGVG
IQNRKTWIDVHMNQEYHVAVSLARLNKGHHDGKALTPRFPKPKLEGWFLLLADVERKEVI
ALKRVQTLRNRTTELLSFYPDNIERKVYSVWLVSDSYLGLDQRYDVRINVRQPISNFQQD
EDG
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcgtggagagaagatccccgattaactactgctctaagagagtttggaaat
gtttcgcaggatatttcagaagtatttgaccaaacaaaggcaagaagacattcttctcct
tctgatttgacatggcaagagttggttacaatattatggacgggatgcaaacaaaggcat
tcttcgaaacaattacggtcatatgtactcgaattaataagtcaagctggggaaatggtt
ggtgaagatgaaagtatagagatgaaagaaacttttgctgctgaaatatttcttacaacc
atgacgctggaacaagttgaatcgaagcatatcaataaaatcaggaaaactttacctaca
gcaaccaataatgatataagagattttcatgaaactgtaaaaaaaattaaaagttttgtt
ggaccaagtgttttcaacaaaatcaaatcacaagtggatgaaattcgaaccgcaacaaca
ttcggaactaaaattaagttttcaaatgatttaccatcattgttgcaaagtacagagatg
gattctgatgatgaagctcaaaacgacaataatgataaactaactgattcatttagacaa
ctaactatatcacaagttaaggctactgaaaagtcatcaagttcaaataaaatatcttct
tcatttgatgttccatggctagagaaaaatttacggaaatattttcactctgatcacttt
ctacccaatataatgtctttacttcaatcttcatcatccaatgatcatctacaaaatgag
ctgttcgatttacttggatttgacagatttgatttgattcaagaattattggagcataga
caggatttactcaaggatcaaaagagaagagaaatattagaatctggatctcgtttcaaa
tctattgattcacggcctacatatggatgtcaggtcacagttcagactgatcaagaaaaa
caagtatcaaaagcattcaggcgggaagagaaaagatttgctaagaaaggaatgaaaaat
ggaaatgatgatggaggagattcagaaataatgaatcctgatttactgagggaacaaagg
gctatggctttactacaagctgcatctgctccattgttttctcagagaggcaaaagcatt
ggaaatatagaaagatatcctcatgtttatgattcacaactcagtgcaaaacatagcgca
gcgttagctggcggaaaaaagatgactctacctgaaggatttgaaacaaaatcaacaaaa
gtttatgaggaaattcgaattccagttaaatcatctaatttaagatttgatcaacctctg
gttaaaattaaggatcttgatgaggtgtctcagctagcattcagtggtatgaagcaattg
aacagagtacagtcatgtgtttacgaatctgcatttaaaacaaatgaaaacctacttatt
tgtgctcctactggcgctgggaaaacaaatgtagcgatgctcactgtgattcgagaaatt
aaaagaaacattgtcgaaggggtgattcagaaagacaagttcaagattgtgtacgttgct
ccaatgaaagctctcgctgctgaaatgacaagaaacttcggaggtcggttggaatcactt
ggtgtcaaagttcgagagttgactggtgatatgcagctgacaaaaagtgaaattattgat
actcagatgctcataacaacacccgagaagtgggatgtggtgactcgtaaagcagttggt
gacacagcacttgctcaacttgttcgtcttctcatcattgatgaagttcatctactgcat
gatgaacgtggacctgtgcttgaaacattggttgccaggacattacgacaggttgaaact
caacagagcatgatcagaattgtcggactctctgctacactgccgaattatcttgatgtt
gcaagcttcctgagagtaaacccacacaaaggtctattttactttgatggaagatttaga
ccagtaccactggaacaaactttcatcggtgtaaaaacaatgaatcgaatgcaacaagca
caagatatgaataatatttgttatgaaaaggctgcaagaaatgtagaaagaggacatcag
gttttggtttttgtccatgctcgaaatgctacagttaaaactgctcaggctttattggaa
atagcaagaaataatggagagacaggattgtttgattgtagacaaatgtcgggatttggg
caagcggaaaaacagatgtctaattcaagaaatcgtgaacttcgtgaattatttgcatct
ggatttggaattcatcatgcaggaatgttgagacccgacagaaatttggtggaaagaaat
tttagtcaaggttttatcaaggtattatgctgtacagccacacttgcttggggagtcaat
cttcctgcacatgctgtcgtaatcaaaggtacagagatctacgatgcaaagcaaggtact
tttgtggatttgggaattctcgatgtcatgcagatatttggacgagcaggtcgaccacag
tttgatacatcaggagaaggaacaatcatcacctcgtatactaaactatctcattacctt
gcattactaacaagacaaaatccaattgaaagtcaatttgtagcaaaaataacagacaac
ttgaatgctgagatctgtctcggaacggtcaattctgtggaagatggtgtgaaatggttg
tcttatacttatttatacaccagaatgagaaaaaatcctttggtttatggaatttcatat
gacagacttgctcaagatccattacttgaaagatggagatctgaactgattgtcaatgca
ggaaaaaatcttgcaaaagctaaaatgacaagatttactgagagaacaggttatttcaat
tctacggatatgggaagaactgcttctcattattacatcaatcataacacaatcgaactg
ttcaatgaaatgatcaatccaacaatgtcaatctccaacatatttgtaatgatttctaaa
tgcagtgaatttgaacaaatcaagcttcgagatgatgaattggaagaacttgatgatttg
atcgacactatgtgtttgataccacctggtggtggttctgagaatacctatggtaaagtc
aatattcttctgcaaacgtatatatctcgtggatctgttagaagtttttctctcacatct
gatttgatgtatattgctcagaatgctggtcgaatcgtgagaggtttatttgacattgct
gtgaagcaaggagaaccagttcttacaaagaagcttcttgatttgtgcaaatgtgttgat
cgtagaatgtggcctgatgaatctccacttcaacagtttccgattctaaaatttgaaacg
ttgaggaaaatcaaagaacaacgactcacaattgataaaatgcaagacatgaatgccaat
gatattggtcacatgcttcgtcatcctcgtattggcacaactgtaaaaatgtgtgttaaa
gaatttccagcgattgaacttgagacaacaattcaaccaatcacaagatctgttctcaga
attcgtcttaccatcattcctaggttcaaatggcatagaaaagttcatggaacaacagga
gaaccttggtggatttgggttgaagatcctgagaccaacatgatgtatcacagtgaatat
tttattttacatatgaagcatgttgagaatgctgaagaacaacaacttgtctttactatt
ccaatagttgaaccagttccatcgcaatatatggttcatgcagaatcagatagatggttg
ggagcttctgcaatttgtccaatatcatttcaacatttgatattaccagatagacatcca
ccccatacagagctgcttgacttagaacctcttcctactgctgctctaaaggaagaatat
cgttgtttgtataaattcacccatttcaatccaatccaaactcaaatatttcattgtttg
tatcacaatgactgcaatgccctcataggagctccgactggatctggtaaaactgttgct
gctgaattagcaatattgagaatgttcaacacacaacctaaatcaaaagcagtttatatt
gctccaatgaaagcacttgtcagagaaagaatctcggactggaaactgagatttggtgac
agattagggaaaacaattgttgagttgactggcgatgtggcacctgacatgcgtgctgtg
gcacgagctgatataattgtgacaacgccagagaagtgggatggtatctcacgtagttgg
caaaccagaaattatgtcaaaagtgtttctctcatcatcattgatgagattcacttactg
ggtgaggatcgagggccagttttggaagtgatcgtgtcgcgaactaacttcatatcatct
catactgatagacttgttagaattgtcggtttatctactgcattggctaatgcaagagat
ttagctgattggttgggaatcaaacagcttggcttattcaacttccgaccttctgtccgt
cccgtaccaatggaagttcatatacaaggatttgcagggaaacattattgcccaagaatg
gcttctatgaacaaaccatgttttcaagccattaggactcattctccagccaaaccagtt
ttaatatttgttgcatcacgtcgacaaactcgtctcactgctttggatttgatcgcatac
ctcgctgctgaagatgacccgaaacaatggttacatatggatgaatggcagatggaagaa
ttaacaagaaatgttcaagataataatctgagattaacactcgcatttggtatcggactt
catcatgctggattagttgaaaaagacagaacattggtggaagagttgtttgttaaccaa
aaaattcaaatccttgttgccacagcaacagttgcgtggggagtaaattttccagctcat
cttgtcattgtgaaaggaactgaatactttgatggaaaaactaaaagatatgttgacttt
cctatcacagatgttcttcaaatgatgggacgagcaggaaggccgcaatttgatgataat
gcagtcgcagttgttcttgtacatgatgtgaagaaacatttctataaaaagttcttgtat
gatccgtttcctgttgaatcaagtttattggatgttttgcctgaccatctcaatgctgaa
atagttgccggtacaatcatgagtaaacaagatgccttggattatttaacttggacttat
ttcttcagaagattattgatgaatcctacttattataatctggagagaatagaaacagac
atgatcaatgagtttttgactggacttgtcgagaaagaactttctgaattacttcgttct
tgttgtgttgttgttgatgacgttgatgatgtcacaatcgaacctacaagtattggaaga
attgcttcatattattatctcagtcatctcactgtgaggatgctttgtcaagaaatgaag
tcaggttcaacaatacctgatatattacaattattaactgaatgtcaggaatacaatgaa
cttcccgtcagacataacgaagatattattaataaaaacttatcagaacatttaccgctt
caagtcagtccagattcatttggatcatcaagtaccaaagcacatcttctgttccaagca
catttttctagaataaagatgccttcatctgattatgcaactgacttgaaatctgttctt
gatcaagctttcaggatattgcagggtatgattgatatcagtgcggatgaaggaatgctg
attacaactcttcgtgttatgcatatggcacagatggttgcacaaggaatatggtttgat
aatcgttcaacattgttgactcttccatatgtggaagaaaaaagtctgtttgttttcaag
cagttctcatttagaggaaatcaagttcgacacttgcctgaactaatgtcattatgcaaa
gaaaatccaagttacgttaaagatgttctgatgaagcattttactgaagctcaagctaaa
aagatttgtgatcatttgagaaatctgcctgttgttgatgtaaagttacatgtaaaagga
agttgggagaagaacgagaaaataaaacaaaagattgttccagatgttcatggtgttggg
atacaaaatcgtaagacgtggattgatgttcatatgaatcaagaatatcacgttgcagtt
tctctagcaagattaaacaagggacatcatgatggtaaagccctcaccccacgttttcct
aaacccaaattagagggctggtttttactgctcgctgacgtagaacggaaagaagttatc
gcactaaagagagtacagacgttacgaaacagaactacagaacttctgtcattttatcct
gacaatattgaaaggaaagtttattctgtctggctggtctcggattcgtatcttggatta
gatcaacggtacgatgttcggataaatgtcagacaacctatcagcaattttcaacaagat
gaagatggttaa
DBGET
integrated database retrieval system
